Accession ID Name Pfam Type
PF18418 Ankyrin ubiquitin-binding domain repeat

This is an Ankyrin repeat domain found in TRABID (also known as Ubiquitin thioesterase ZRANB1) (EC:3.4.19.12). In TRABID, the first ankyrin repeat spans residues 260-290 and is connected to the second repeat residues 313-340 by a long linker that packs against what would correspond to the concave surface in an extended ankyrin-repeat structure. Ankyrin-repeat domains mediate protein interactions through a variety of surfaces. The ankyrin domain of TRABID interacts with ubiquitin, hence it is referred to as the ankyrin ubiquitin-binding domain, or AnkUBD [1].

Pfam Range: 285-381 DPAM-Pfam Range: 270-378
Uniprot ID: A0A096M3X5
Pfam Range: 249-344 DPAM-Pfam Range: 240-338
Uniprot ID: A0A091EQI0
Pfam Range: 249-344 DPAM-Pfam Range: 236-338
Uniprot ID: A0A7L1AHH2

References

1: An ankyrin-repeat ubiquitin-binding domain determines TRABID's specificity for atypical ubiquitin chains. Licchesi JD, Mieszczanek J, Mevissen TE, Rutherford TJ, Akutsu M, Virdee S, El Oualid F, Chin JW, Ovaa H, Bienz M, Komander D; Nat Struct Mol Biol. 2011;19:62-71. PMID:22157957