Accession ID Name Pfam Type
PF18641 LidA long coiled-coil domain coiled_coil

LidA, another Rab1-interacting bacterial effector protein [1], is translocated by Legionella into the host cytosol at the beginning of infection, and it localized to the Legionella-containing vacuole (LCV) at the cytosolic surface [2]. It has been shown that tight interaction with Rab1 allows LidA to facilitate the Legionella targeting factor (DrrA/SidM)-catalyzed release of Rab1 from GDP dissociation inhibitors (GDI) [1]. The base of the protein is formed by two antiparallel coiled-coil structures forming a long coiled-coil domain [1, 2]. This region of LidA interacts with switch and interswitch regions of Rab1 [1] the nucleotide binding pocket of Rab8a [2], hence blocking access to the GDP/GTP-binding site to a great extent [1].

Pfam Range: 165-348 DPAM-Pfam Range: 101-353
Uniprot ID: A0A0W0VS70
Pfam Range: 253-461 DPAM-Pfam Range: 115-474
Uniprot ID: W0BDG0
Pfam Range: 239-417 DPAM-Pfam Range: 56-81,128-433
Uniprot ID: A0A0W1A949

References

1: Structural insights into a unique Legionella pneumophila effector LidA recognizing both GDP and GTP bound Rab1 in their active state. Cheng W, Yin K, Lu D, Li B, Zhu D, Chen Y, Zhang H, Xu S, Chai J, Gu L; PLoS Pathog. 2012;8:e1002528. PMID:22416225

2: Protein LidA from Legionella is a Rab GTPase supereffector. Schoebel S, Cichy AL, Goody RS, Itzen A; Proc Natl Acad Sci U S A. 2011;108:17945-17950. PMID:22011575