Accession ID Name Pfam Type
PF18693 TRAM domain domain

This is a C-terminal TRAM (after TRM2, a family of uridine methylases, and MiaB) domain found in the methylthiotransferases RimO enzymes that catalyze the conversion of aspartate to 2-methylthio-aspartate (msD) in the S12 protein near the decoding center in prokaryotic ribosomes. The TRAM domain in RimO, contains five anti-parallel beta-strands and docks on the surface of the Radical-SAM domain at the distal edge of its open TIM-barrel from its conserved [4Fe-4S] cluster [1].

Pfam Range: 470-538 DPAM-Pfam Range: 218-539
Uniprot ID: G8NXW8
Pfam Range: 372-436 DPAM-Pfam Range: 131-439
Uniprot ID: E4U522
Pfam Range: 380-442 DPAM-Pfam Range: 139-442
Uniprot ID: H5UX97

References

1: Two Fe-S clusters catalyze sulfur insertion by radical-SAM methylthiotransferases. Forouhar F, Arragain S, Atta M, Gambarelli S, Mouesca JM, Hussain M, Xiao R, Kieffer-Jaquinod S, Seetharaman J, Acton TB, Montelione GT, Mulliez E, Hunt JF, Fontecave M; Nat Chem Biol. 2013;9:333-338. PMID:23542644