Accession ID Name Pfam Type
PF18714 DNA polymerase II intein Domain IV domain

This domain can be found in the hyperthermophilic archaeon Thermococcus kodakaraensis Pol-2 intein. It is suggested to be a potential DNA binding domain [1, 2].

Pfam Range: 975-1123 DPAM-Pfam Range: 987-1122
Uniprot ID: P77933
Pfam Range: 1006-1154 DPAM-Pfam Range: 1018-1149
Uniprot ID: Q58295
Pfam Range: 617-759 DPAM-Pfam Range: 630-763
Uniprot ID: O59610

References

1: Crystal structure of intein homing endonuclease II encoded in DNA polymerase gene from hyperthermophilic archaeon Thermococcus kodakaraensis strain KOD1. Matsumura H, Takahashi H, Inoue T, Yamamoto T, Hashimoto H, Nishioka M, Fujiwara S, Takagi M, Imanaka T, Kai Y; Proteins. 2006;63:711-715. PMID:16493661

2: Structural and mutational studies of a hyperthermophilic intein from DNA polymerase II of Pyrococcus abyssi. Du Z, Liu J, Albracht CD, Hsu A, Chen W, Marieni MD, Colelli KM, Williams JE, Reitter JN, Mills KV, Wang C; J Biol Chem. 2011;286:38638-38648. PMID:21914805