Accession ID Name Pfam Type
PF19543 Glycoside hydrolase 123, N-terminal domain domain

This domain is found at the N-terminal end of protein members of the glycoside hydrolase family 123, including N-acetylgalactosaminidase from Clostridium perfringens. This enzyme removes specific terminal N-D-acetylgalactosamine from glycosphingolipids. This domain folds into a twisted beta-sandwich that consists of two 5-stranded beta-sheets, two small beta-strands and four small alpha-helices [1].

Pfam Range: 28-994 DPAM-Pfam Range: 619-897
Uniprot ID: A0A1I5SLP7
Pfam Range: 33-1006 DPAM-Pfam Range: 621-910
Uniprot ID: A0A0F5J7X1
Pfam Range: 27-993 DPAM-Pfam Range: 614-903
Uniprot ID: A0A291R0I3

References

1: The Details of Glycolipid Glycan Hydrolysis by the Structural Analysis of a Family 123 Glycoside Hydrolase from Clostridium perfringens. Noach I, Pluvinage B, Laurie C, Abe KT, Alteen MG, Vocadlo DJ, Boraston AB; J Mol Biol. 2016;428:3253-3265. PMID:27038508

2: Structural and mechanistic insights into a Bacteroides vulgatus retaining N-acetyl-beta-galactosaminidase that uses neighbouring group participation. Roth C, Petricevic M, John A, Goddard-Borger ED, Davies GJ, Williams SJ; Chem Commun (Camb). 2016;52:11096-11099. PMID:27546776