Accession ID Name Pfam Type
PF20656 Malate synthase, N-terminal domain domain

Malate synthase (MS) catalyses the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle in bacteria, fungi and plants. There have been identified two isoforms, A and G (MSA and MSG, respectively) that differ in size and is attributed to an inserted alpha/beta domain in MSG that may have regulatory function [1,2]. They consist of an N-terminal alpha-helical claps, a central TIM barrel and a C-terminal alpha-helical plug. This entry represents the N-terminal clasp that wraps around one side of the TIM barrel and buttressed it [1,2,3,4].

Pfam Range: 8-71 DPAM-Pfam Range: 1-521
Uniprot ID: Q9RYN3
Pfam Range: 14-77 DPAM-Pfam Range: 6-559
Uniprot ID: P49081
Pfam Range: 8-71 DPAM-Pfam Range: 4-541
Uniprot ID: B5GRN8

References

1: Atomic resolution structures of Escherichia coli and Bacillus anthracis malate synthase A: comparison with isoform G and implications for structure-based drug discovery. Lohman JR, Olson AC, Remington SJ; Protein Sci. 2008;17:1935-1945. PMID:18714089

2: Structure of the Escherichia coli malate synthase G:pyruvate:acetyl-coenzyme A abortive ternary complex at 1.95 A resolution. Anstrom DM, Kallio K, Remington SJ; Protein Sci. 2003;12:1822-1832. PMID:12930982

3: Crystal structure of Escherichia coli malate synthase G complexed with magnesium and glyoxylate at 2.0 A resolution: mechanistic implications. Howard BR, Endrizzi JA, Remington SJ; Biochemistry 2000;39:3156-3168. PMID:10715138

4: Solution NMR-derived global fold of a monomeric 82-kDa enzyme. Tugarinov V, Choy WY, Orekhov VY, Kay LE; Proc Natl Acad Sci U S A. 2005;102:622-627. PMID:15637152