Accession ID Name Pfam Type
PF20910 TAR DNA-binding protein 43, C-terminal disordered

TDP-43 is a member of the heterogeneous nuclear ribonucleoprotein (hnRNP) family, which is involved in RNA processing and in stress granule response. It is linked to the pathogenesis of amyotrophic lateral sclerosis (ALS) and frontotemporal dementia (FTD). It is the main component of intraneuronal inclusion bodies (IBs), a pathological hallmark of ALS. This entry represents the C-terminal Gly-rich region of TAR DNA-binding protein 43 (TDP-43) [1-4], which is an intrinsically disordered prion-like domain, capable of assemble into dynamic oligomers rich in beta-sheet structures, being responsible of TDP-43 aggregation [2].

Pfam Range: 267-364 DPAM-Pfam Range: 192-267
Uniprot ID: A0A553NWN3
Pfam Range: 263-360 DPAM-Pfam Range: 188-263
Uniprot ID: H2LEV4
Pfam Range: 263-368 DPAM-Pfam Range: 187-264
Uniprot ID: W5MHW9

References

1: Cellular model of TAR DNA-binding protein 43 (TDP-43) aggregation based on its C-terminal Gln/Asn-rich region. Budini M, Buratti E, Stuani C, Guarnaccia C, Romano V, De Conti L, Baralle FE; J Biol Chem. 2012;287:7512-7525. PMID:22235134

2: Strategies in the design and development of (TAR) DNA-binding protein 43 (TDP-43) binding ligands. Rao PPN, Shakeri A, Zhao Y, Calon F; Eur J Med Chem. 2021;225:113753. PMID:34388383

3: Expanding the TDP-43 Proteinopathy Pathway From Neurons to Muscle: Physiological and Pathophysiological Functions. Versluys L, Ervilha Pereira P, Schuermans N, De Paepe B, De Bleecker JL, Bogaert E, Dermaut B; Front Neurosci. 2022;16:815765. PMID:35185458

4: ALS-Causing Mutations Significantly Perturb the Self-Assembly and Interaction with Nucleic Acid of the Intrinsically Disordered Prion-Like Domain of TDP-43. Lim L, Wei Y, Lu Y, Song J; PLoS Biol. 2016;14:e1002338. PMID:26735904