Accession ID Name Pfam Type
PF20931 Dicer, platform domain domain

This domain is found in Endoribonuclease Dicer from chordates. This dsRNA endoribonuclease is involved in the cleavage of long RNA precursors into short dsRNAs and plays a role in gene silencing. Dicer shows two N-terminal helicase domains (Pfam:PF04851 and Pfam:PF00271), a dimerisation domain (Pfam:PF03368), a Platform domain, a PAZ domain (Pfam:PF02170), an RNase IIIa/b domain (Pfam:PF00636) and a dsRNA-binding domain in its C-terminal region. This entry represents the platform domain, which sits on the top of the L-shaped Dicer structure and shows a phosphate pocket [1-3].

Pfam Range: 751-876 DPAM-Pfam Range: 746-888
Uniprot ID: A0A6J8B3Q5
Pfam Range: 274-397 DPAM-Pfam Range: 265-410
Uniprot ID: A0A7J7KGX5
Pfam Range: 734-859 DPAM-Pfam Range: 726-865
Uniprot ID: A0A2J7PPP5

References

1: Cryo-EM Structure of Human Dicer and Its Complexes with a Pre-miRNA Substrate. Liu Z, Wang J, Cheng H, Ke X, Sun L, Zhang QC, Wang HW; Cell. 2018;173:1191-1203. PMID:29706542

2: Dicer-TRBP complex formation ensures accurate mammalian microRNA biogenesis. Wilson RC, Tambe A, Kidwell MA, Noland CL, Schneider CP, Doudna JA; Mol Cell. 2015;57:397-407. PMID:25557550

3: A phosphate-binding pocket within the platform-PAZ-connector helix cassette of human Dicer. Tian Y, Simanshu DK, Ma JB, Park JE, Heo I, Kim VN, Patel DJ; Mol Cell. 2014;53:606-616. PMID:24486018