Accession ID Name Pfam Type
PF21171 2',5'-phosphodiesterase 12-like, N-terminal domain domain

This domain is found in 2',5'-phosphodiesterase 12 from humans (PDE12) and similar animal proteins. Pde12 cleaves 2',5'- phosphodiester bond linking adenosines of oligoadenylates. It plays a role as a negative regulator of the 2-5A system that is one of the major pathways for antiviral and antitumour functions induced by interferons (IFNs). PDE12 is organised into two clear domains: an N-terminal domain (this entry) and a C-terminal domain (Pfam:PF03372). This domain is primarily composed of extended loop regions around a core composed of a six beta-strand meander that forms a two-layer beta-sandwich, showing an immunoglobulin-like fold [1-2].

Pfam Range: 149-247 DPAM-Pfam Range: 149-249
Uniprot ID: H3B6R5
Pfam Range: 157-254 DPAM-Pfam Range: 157-256
Uniprot ID: V8PEM5
Pfam Range: 127-237 DPAM-Pfam Range: 127-239
Uniprot ID: Q6TUH0

References

1: The Role of Phosphodiesterase 12 (PDE12) as a Negative Regulator of the Innate Immune Response and the Discovery of Antiviral Inhibitors. Wood ER, Bledsoe R, Chai J, Daka P, Deng H, Ding Y, Harris-Gurley S, Kryn LH, Nartey E, Nichols J, Nolte RT, Prabhu N, Rise C, Sheahan T, Shotwell JB, Smith D, Tai V, Taylor JD, Tomberlin G, Wang L, Wisely B, You S, Xia B, Dickson H; J Biol Chem. 2015;290:19681-19696. PMID:26055709

2: PDE12 removes mitochondrial RNA poly(A) tails and controls translation in human mitochondria. Rorbach J, Nicholls TJ, Minczuk M; Nucleic Acids Res. 2011;39:7750-7763. PMID:21666256