Accession ID Name Pfam Type
PF21188 Pre-mRNA-splicing helicase BRR2 plug domain domain

This entry represents the Plug domain from the Brr2 RNA helicase protein. The Brr2 helicase provides the key remodelling activity for spliceosome catalytic activation, during which it disrupts the U4/U6 di-snRNP (small nuclear RNA protein) [2]. The plug domain is a small alpha helical bundle domain found near the N-terminus of the Brr2 protein [2].

Pfam Range: 116-188 DPAM-Pfam Range: 103-198
Uniprot ID: P32639
Pfam Range: 13-80 DPAM-Pfam Range: 2-94
Uniprot ID: A0A395MNR1
Pfam Range: 109-175 DPAM-Pfam Range: 63-188
Uniprot ID: A0A2R2MMN6

References

1: The 3.8 A structure of the U4/U6.U5 tri-snRNP: Insights into spliceosome assembly and catalysis. Wan R, Yan C, Bai R, Wang L, Huang M, Wong CC, Shi Y; Science. 2016;351:466-475. PMID:26743623

2: The large N-terminal region of the Brr2 RNA helicase guides productive spliceosome activation. Absmeier E, Wollenhaupt J, Mozaffari-Jovin S, Becke C, Lee CT, Preussner M, Heyd F, Urlaub H, Luhrmann R, Santos KF, Wahl MC; Genes Dev. 2015;29:2576-2587. PMID:26637280

3: Cryo-EM structure of the yeast U4/U6.U5 tri-snRNP at 3.7 A resolution. Nguyen THD, Galej WP, Bai XC, Oubridge C, Newman AJ, Scheres SHW, Nagai K; Nature. 2016;530:298-302. PMID:26829225