Accession ID Name Pfam Type
PF21196 PcrA/UvrD tudor domain domain

The PcrA/UvrD helicase binds directly to RNA polymerase (RNAP). This entry represents the C-terminal tudor domain that mediates interaction with RNA polymerase [4-5].

Pfam Range: 702-749 DPAM-Pfam Range: 691-752
Uniprot ID: A0A0R2F541
Pfam Range: 686-734 DPAM-Pfam Range: 676-736
Uniprot ID: F5L444
Pfam Range: 699-747 DPAM-Pfam Range: 688-748
Uniprot ID: A0A0A1MVS7

References

1: Crystal structure of a DExx box DNA helicase. Subramanya HS, Bird LE, Brannigan JA, Wigley DB; Nature. 1996;384:379-383. PMID:8934527

2: DNA binding mediates conformational changes and metal ion coordination in the active site of PcrA helicase. Soultanas P, Dillingham MS, Velankar SS, Wigley DB; J Mol Biol. 1999;290:137-148. PMID:10388562

3: Structural and mechanistic insight into DNA unwinding by Deinococcus radiodurans UvrD. Stelter M, Acajjaoui S, McSweeney S, Timmins J; PLoS One. 2013;8:e77364. PMID:24143224

4: The structure and function of an RNA polymerase interaction domain in the PcrA/UvrD helicase. Sanders K, Lin CL, Smith AJ, Cronin N, Fisher G, Eftychidis V, McGlynn P, Savery NJ, Wigley DB, Dillingham MS; Nucleic Acids Res. 2017;45:3875-3887. PMID:28160601

5: UvrD helicase-RNA polymerase interactions are governed by UvrD's carboxy-terminal Tudor domain. Kawale AA, Burmann BM; Commun Biol. 2020;3:607. PMID:33097771