Accession ID Name Pfam Type
PF21280 Archaeal helicase, domain 4 domain

This entry includes archaeal helicases from the helicase superfamily 2, and represents domain 4 described in [1,3]. This domain folds into a seven alpha-helix bundle structure and seems to be unique within this helicase family. The central helix acts as a ratchet and mediates stacking interactions on base moieties of the DNA [3].

Pfam Range: 491-604 DPAM-Pfam Range: 476-604
Uniprot ID: Q6KZ87
Pfam Range: 572-696 DPAM-Pfam Range: 509-699
Uniprot ID: Q5UYM9
Pfam Range: 513-640 DPAM-Pfam Range: 494-640
Uniprot ID: O73946

References

1: Structural basis for DNA duplex separation by a superfamily-2 helicase. Buttner K, Nehring S, Hopfner KP; Nat Struct Mol Biol. 2007;14:647-652. PMID:17558417

2: Structure of the DNA repair helicase hel308 reveals DNA binding and autoinhibitory domains. Richards JD, Johnson KA, Liu H, McRobbie AM, McMahon S, Oke M, Carter L, Naismith JH, White MF; J Biol Chem. 2008;283:5118-5126. PMID:18056710

3: Atomic structures and functional implications of the archaeal RecQ-like helicase Hjm. Oyama T, Oka H, Mayanagi K, Shirai T, Matoba K, Fujikane R, Ishino Y, Morikawa K; BMC Struct Biol. 2009;9:2. PMID:19159486