Accession ID Name Pfam Type
PF21579 tRNA (uracil(54)-C(5))-methyltransferase, TRAM domain domain

This domain is found at the N-terminal end of tRNA (uracil(54)-C(5))- methyltransferase from Pyrococcus abyssi (PabTrmU54), which catalyses the formation of 5-methyl-uridine at position 54 (m5U54) in tRNA. This domain, a TRAM domain, adopts a five-stranded beta barrel architecture characteristic of an oligosaccharide/ oligonucleotide-binding fold (OB-fold) [1].

Pfam Range: 1-56 DPAM-Pfam Range: 1-55
Uniprot ID: Q8U1N4
Pfam Range: 2-60 DPAM-Pfam Range: 1-59
Uniprot ID: Q5JHF7
Pfam Range: 1-59 DPAM-Pfam Range: 1-60
Uniprot ID: C6A1L9

References

1: The crystal structure of Pyrococcus abyssi tRNA (uracil-54, C5)-methyltransferase provides insights into its tRNA specificity. Walbott H, Leulliot N, Grosjean H, Golinelli-Pimpaneau B; Nucleic Acids Res. 2008;36:4929-4940. PMID:18653523