Accession ID Name Pfam Type
PF21668 DNA-directed RNA polymerase subunit beta', hybrid domain domain

This is a hybrid domain found in DNA-directed RNA polymerase subunit beta' (RPOC) found in Deinococcus [1-5].

Pfam Range: 242-358 DPAM-Pfam Range: 216-357
Uniprot ID: Q9RVW0
Pfam Range: 241-347 DPAM-Pfam Range: 217-346
Uniprot ID: Q1J0P7
Pfam Range: 242-336 DPAM-Pfam Range: 217-340
Uniprot ID: Q8RQE8

References

1: Crystal structure of a bacterial RNA polymerase holoenzyme at 2.6 A resolution. Vassylyev DG, Sekine S, Laptenko O, Lee J, Vassylyeva MN, Borukhov S, Yokoyama S; Nature. 2002;417:712-719. PMID:12000971

2: Structural basis of transcription initiation: RNA polymerase holoenzyme at 4 A resolution. Murakami KS, Masuda S, Darst SA; Science. 2002;296:1280-1284. PMID:12016306

3: Structure and function of lineage-specific sequence insertions in the bacterial RNA polymerase beta' subunit. Chlenov M, Masuda S, Murakami KS, Nikiforov V, Darst SA, Mustaev A; J Mol Biol. 2005;353:138-154. PMID:16154587

4: Inhibition of bacterial RNA polymerase by streptolydigin: stabilization of a straight-bridge-helix active-center conformation. Tuske S, Sarafianos SG, Wang X, Hudson B, Sineva E, Mukhopadhyay J, Birktoft JJ, Leroy O, Ismail S, Clark AD Jr, Dharia C, Napoli A, Laptenko O, Lee J, Borukhov S, Ebright RH, Arnold E; Cell. 2005;122:541-552. PMID:16122422

5: Structural basis of transcriptional pausing in bacteria. Weixlbaumer A, Leon K, Landick R, Darst SA; Cell. 2013;152:431-441. PMID:23374340