Accession ID Name Pfam Type
PF21694 DNA polymerase III delta subunit, C-terminal domain domain

This entry represents the C-terminal domain of the delta subunit from the clamp-loader complex of Bacillus subtilis and other Gram-positive bacteria, which is structurally similar to that of the DNApol3 delta subunit from E.coli [1-3]. This domain interacts with other subunits in the complex (tau and delta') and the nature of these interactions appear to be hydrophilic in contrast with the one observed in Gram-negative bacteria [3].

Pfam Range: 222-342 DPAM-Pfam Range: 221-346
Uniprot ID: A0A1M4M7F1
Pfam Range: 218-338 DPAM-Pfam Range: 217-343
Uniprot ID: A0A1M4VWG1
Pfam Range: 203-323 DPAM-Pfam Range: 202-326
Uniprot ID: R5CZA9

References

1: Mechanism of processivity clamp opening by the delta subunit wrench of the clamp loader complex of E. coli DNA polymerase III. Jeruzalmi D, Yurieva O, Zhao Y, Young M, Stewart J, Hingorani M, O'Donnell M, Kuriyan J; Cell. 2001;106:417-428. PMID:11525728

2: The mechanism of ATP-dependent primer-template recognition by a clamp loader complex. Simonetta KR, Kazmirski SL, Goedken ER, Cantor AJ, Kelch BA, McNally R, Seyedin SN, Makino DL, O'Donnell M, Kuriyan J; Cell. 2009;137:659-671. PMID:19450514

3: Insights into the structure and assembly of the Bacillus subtilis clamp-loader complex and its interaction with the replicative helicase. Afonso JP, Chintakayala K, Suwannachart C, Sedelnikova S, Giles K, Hoyes JB, Soultanas P, Rafferty JB, Oldham NJ; Nucleic Acids Res. 2013;41:5115-5126. PMID:23525462