Accession ID Name Pfam Type
PF21728 PADR1, N-terminal helical domain domain

This entry represents de N-terminal helical region of PADR1 zinc-binding domain found in poly(ADP-ribose) polymerase-1 (PARP-1) from human and its homologues. The PADR1, known as the third zinc-binding domain (Zn3) localises between the N-terminal PARP-type zinc fingers (Zn1 and Zn2) and the central BRCT domain; it is involved in protein-protein interactions that orchestrate PARP-1 activation and are critical to the DNA-dependent stimulation of PARP-1 [1-5].

Pfam Range: 227-281 DPAM-Pfam Range: 219-352
Uniprot ID: T1HMS8
Pfam Range: 220-280 DPAM-Pfam Range: 212-351
Uniprot ID: B4NIX3
Pfam Range: 228-287 DPAM-Pfam Range: 216-356
Uniprot ID: G3PBI6

References

1: A third zinc-binding domain of human poly(ADP-ribose) polymerase-1 coordinates DNA-dependent enzyme activation. Langelier MF, Servent KM, Rogers EE, Pascal JM; J Biol Chem. 2008;283:4105-4114. PMID:18055453

2: Structural basis for DNA damage-dependent poly(ADP-ribosyl)ation by human PARP-1. Langelier MF, Planck JL, Roy S, Pascal JM; Science. 2012;336:728-732. PMID:22582261

3: Domain C of human poly(ADP-ribose) polymerase-1 is important for enzyme activity and contains a novel zinc-ribbon motif. Tao Z, Gao P, Hoffman DW, Liu HW; Biochemistry. 2008;47:5804-5813. PMID:18452307

4: Crystal structures of poly(ADP-ribose) polymerase-1 (PARP-1) zinc fingers bound to DNA: structural and functional insights into DNA-dependent PARP-1 activity. Langelier MF, Planck JL, Roy S, Pascal JM; J Biol Chem. 2011;286:10690-10701. PMID:21233213

5: Poly(ADP-Ribose) Polymerases in Plants and Their Human Counterparts: Parallels\tand Peculiarities. Rissel D, Peiter E; Int J Mol Sci. 2019;20:1638. PMID:30986964