A6NHR9 SMHD1_HUMAN
Gene name: SMCHD1
Protein name: Structural maintenance of chromosomes flexible hinge domain-containing protein 1
List of terms from Generic GO subset, which this protein is a part of:
- anatomical structure development GO:0048856
- cellular component assembly GO:0022607
- cellular nitrogen compound metabolic process GO:0034641
- chromosome organization GO:0051276
- DNA metabolic process GO:0006259
- response to stress GO:0006950
Table: Top 10 the most similar proteins, based on disordered regions enriched in particular amino acids. Cosine similarity calculation is described here. The whole list can be downloaded at the Download page
| # | UniProt Accession | Gene Name | Cosine Similarity | Generic GO terms |
|---|---|---|---|---|
| 1 | Q08828 | ADCY1 | 0.90966 |
anatomical structure development
GO:0048856 biosynthetic process GO:0009058 cell differentiation GO:0030154 ... |
| 2 | Q5RKV6 | EXOSC6 | 0.86107 |
anatomical structure development
GO:0048856 catabolic process GO:0009056 cellular nitrogen compound metabolic process GO:0034641 ... |
| 3 | Q12946 | FOXF1 | 0.83203 |
anatomical structure development
GO:0048856 anatomical structure formation involved in morphogenesis GO:0048646 biosynthetic process GO:0009058 ... |
| 4 | Q15818 | NPTX1 | 0.82148 |
anatomical structure development
GO:0048856 cell differentiation GO:0030154 cell morphogenesis GO:0000902 ... |
| 5 | Q8N1B3 | CCNQ | 0.79344 |
biosynthetic process
GO:0009058 cellular nitrogen compound metabolic process GO:0034641 |
| 6 | P25100 | ADRA1D | 0.77727 |
cell population proliferation
GO:0008283 cell-cell signaling GO:0007267 cellular protein modification process GO:0006464 ... |
| 7 | P33176 | KIF5B | 0.75455 |
anatomical structure development
GO:0048856 cell differentiation GO:0030154 cell morphogenesis GO:0000902 ... |
| 8 | O60902 | SHOX2 | 0.7468 |
anatomical structure development
GO:0048856 cell differentiation GO:0030154 cell morphogenesis GO:0000902 ... |
| 9 | Q53HC5 | KLHL26 | 0.7409 | |
| 10 | Q6ZNB6 | NFXL1 | 0.7385 |
biosynthetic process
GO:0009058 cellular nitrogen compound metabolic process GO:0034641 |
20 40 60 80 100
AA: MAAADGGGPGGASVGTEEDGGGVGHRTVYLFDRREKESELGDRPLQVGERSDYAGFRACVCQTLGISPEEKFVITTTSRKEITCDNFDETVKDGVTLYLL
STMI:
DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDD.............................................................................
DO_IUPRED2A: DDDDDDDDDDDDDDDDDDD....................DDDDDD.......................................................
DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDD..............................................................................
CONSENSUS: DDDDDDDDDDDDDDDDDDDDDD..............................................................................
CONSENSUS_MOBI: DDDDDDDDDDDDDDDDDDDDDDDD............................................................................
RICH_[AG]: AAAdGGGpGGAsvGteedGG
RICH_[G]: GGGpGGasvGteedGGG
RICH_fLPS_[G]: GGGpGGasvGteedGGG
RICH_MOBI_[AG]: AAAdGGGpGGAsvGteedGG
RICH_MOBI_[G]: GGGpGGasvGteedGGGvG
RICH_MOBI_[GV]: VGteedGGGV
RICH_fLPS_MOBI_[G]: dGGGpGGasvGteedGGGvG
120 140 160 180 200
AA: QSVNQLLLTATKERIDFLPHYDTLVKSGMYEYYASEGQNPLPFALAELIDNSLSATSRNIGVRRIQIKLLFDETQGKPAVAVIDNGRGMTSKQLNNWAVY
STMI:
DO_DISOPRED3: ....................................................................................................
DO_IUPRED2A: .................................................................................DD.................
DO_SPOTD: ....................................................................................................
CONSENSUS: ....................................................................................................
CONSENSUS_MOBI: ....................................................................................................
220 240 260 280 300
AA: RLSKFTRQGDFESDHSGYVRPVPVPRSLNSDISYFGVGGKQAVFFVGQSARMISKPADSQDVHELVLSKEDFEKKEKNKEAIYSGYIRNRKPSDSVHITN
STMI:
DO_DISOPRED3: .......DDDDDDDDDDDDD.....................................................D.....D....................
DO_IUPRED2A: ...............DD.................................................................D..........D...D..
DO_SPOTD: .........DDDDDDDD...................................................................................
CONSENSUS: .........DDDDDDDD...................................................................................
CONSENSUS_MOBI: ....................................................................................................
320 340 360 380 400
AA: DDERFLHHLIIEEKEKDSFTAVVITGVQPEHIQYLKNYFHLWTRQLAHIYHYYIHGPKGNEIRTSKEVEPFNNIDIEISMFEKGKVPKIVNLREIQDDMQ
STMI:
DO_DISOPRED3: .DD.D.....................................................DDDDDDDDDDDDD.............................
DO_IUPRED2A: ................................................................D.D.................................
DO_SPOTD: ..........................................................DDDDDDDDDDD...............................
CONSENSUS: ..........................................................DDDDDDDDDDD...............................
CONSENSUS_MOBI: ....................................................................................................
420 440 460 480 500
AA: TLYVNTAADSFEFKAHVEGDGVVEGIIRYHPFLYDRETYPDDPCFPSKLKDEDDEDDCFILEKAARGKRPIFECFWNGRLIPYTSVEDFDWCTPPKKRGL
STMI:
DO_DISOPRED3: ........................................DDDDDDDDDDDDDDDDDDDDDDDD....................................
DO_IUPRED2A: ............................................DDD.....................................................
DO_SPOTD: ..............................................DDDDDDDDDDDDD.........................................
CONSENSUS: ............................................DDDDDDDDDDDDDDD.........................................
CONSENSUS_MOBI: ....................................................................................................
RICH_[DF]: FpsklkDeDDeDDcF
520 540 560 580 600
AA: APIECYNRISGALFTNDKFQVSTNKLTFMDLELKLKDKNTLFTRILNGQEQRMKIDREFALWLKDCHEKYDKQIKFTLFKGVITRPDLPSKKQGPWATYA
STMI:
DO_DISOPRED3: ...............................D.D...DDDDDDD........................................................
DO_IUPRED2A: ....................................................................................................
DO_SPOTD: ....................................................................................................
CONSENSUS: ....................................................................................................
CONSENSUS_MOBI: ....................................................................................................
620 640 660 680 700
AA: AIEWDGKIYKAGQLVKTIKTLPLFYGSIVRFFLYGDHDGEVYATGGEVQIAMEPQALYDEVRTVPIAKLDRTVAEKAVKKYVEDEMARLPDRLSVTWPEG
STMI:
DO_DISOPRED3: ............................................................D.D.................DDDDD..DD...........
DO_IUPRED2A: ....................................................................................................
DO_SPOTD: ....................................................................................................
CONSENSUS: ....................................................................................................
CONSENSUS_MOBI: ....................................................................................................
720 740 760 780 800
AA: DELLPNEVRPAGTPIGALRIEILNKKGEAMQKLPGTSHGGSKKLLVELKVILHSSSGNKEIISHISQHGGKWPYWFKKMENIQKLGNYTLKLQVVLNESN
STMI:
DO_DISOPRED3: ........................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.DDDDD..DD...................................
DO_IUPRED2A: ...D.D........................DDDDD.................................................................
DO_SPOTD: ....................................................................................................
CONSENSUS: ..............................DDDDD.................................................................
CONSENSUS_MOBI: ....................................................................................................
820 840 860 880 900
AA: ADTYAGRPLPSKAIKFSVKEGKPEKFSFGLLDLPFRVGVPFNIPLEFQDEFGHTSQLVTDIQPVLEASGLSLHYEEITKGPNCVIRGVTAKGPVNSCQGK
STMI:
DO_DISOPRED3: ..........................................................DD..D...D..D..............................
DO_IUPRED2A: ....................................................................................................
DO_SPOTD: ....................................................................................................
CONSENSUS: ....................................................................................................
CONSENSUS_MOBI: ....................................................................................................
920 940 960 980 1000
AA: NYNLKVTLPGLKEDSQILKIRLLPGHPRRLKVKPDSEILVIENGTAFPFQVEVLDESDNITAQPKLIVHCKFSGAPNLPVYVVDCSSSGTSILTGSAIQV
STMI:
DO_DISOPRED3: ....................................................................................................
DO_IUPRED2A: ....................................................................................................
DO_SPOTD: ....................................................................................................
CONSENSUS: ....................................................................................................
CONSENSUS_MOBI: ....................................................................................................
1020 1040 1060 1080 1100
AA: QNIKKDQTLKARIEIPSCKDVAPVEKTIKLLPSSHVARLQIFSVEGQKAIQIKHQDEVNWIAGDIMHNLIFQMYDEGEREINITSALAEKIKVNWTPEIN
STMI:
DO_DISOPRED3: .....................................D.DDDDDD.D...D..D..............................................
DO_IUPRED2A: ....................................................................................................
DO_SPOTD: ....................................................................................................
CONSENSUS: ....................................................................................................
CONSENSUS_MOBI: ....................................................................................................
1120 1140 1160 1180 1200
AA: KEHLLQGLLPDVQVPTSVKDMRYCQVSFQDDHVSLESAFTVRPLPDEPKHLKCEMKGGKTVQMGQELQGEVVIIITDQYGNQIQAFSPSSLSSLSIAGVG
STMI:
DO_DISOPRED3: ..................................................................................DDDDDDDDDDDDDDDDDD
DO_IUPRED2A: ......................................DD.........D.DD.DD............................................
DO_SPOTD: ....................................................................................................
CONSENSUS: ....................................................................................................
CONSENSUS_MOBI: ....................................................................................................
1220 1240 1260 1280 1300
AA: LDSSNLKTTFQENTQSISVRGIKFIPGPPGNKDLCFTWREFSDFIRVQLISGPPAKLLLIDWPELKESIPVINGRDLQNPIIVQLCDQWDNPAPVQHVKI
STMI:
DO_DISOPRED3: DDD.................................................................................................
DO_IUPRED2A: ....................DDD.............................................................................
DO_SPOTD: ....................................................................................................
CONSENSUS: ....................................................................................................
CONSENSUS_MOBI: ....................................................................................................
1320 1340 1360 1380 1400
AA: SLTKASNLKLMPSNQQHKTDEKGRANLGVFSVFAPRGEHTLQVKAIYNKSIIEGPIIKLMILPDPEKPVRLNVKYDKDASFLAGGLFTDFMISVISEDDS
STMI:
DO_DISOPRED3: ..DDDDDDDDDDDDDDDDDDDDDD............................................................................
DO_IUPRED2A: ..........DDDDDDDDD.DD..............................................................................
DO_SPOTD: ....................................................................................................
CONSENSUS: ..........DDDDDDDDDDDD..............................................................................
CONSENSUS_MOBI: ....................................................................................................
1420 1440 1460 1480 1500
AA: IIKNINPARISMKMWKLSTSGNRPPANAETFSCNKIKDNDKEDGCFYFRDKVIPNKVGTYCIQFGFMMDKTNILNSEQVIVEVLPNQPVKLVPKIKPPTP
STMI:
DO_DISOPRED3: ..................DD.DDDDDDDDDDDDDDDDDDDD....................................................DDDDDDD
DO_IUPRED2A: ...........................DDDDDDD............................................................D.....
DO_SPOTD: ....................................................................................................
CONSENSUS: ...........................DDDDDDD............................................................D.....
CONSENSUS_MOBI: ....................................................................................................
1520 1540 1560 1580 1600
AA: AVSNVRSVASRTLVRDLHLSITDDYDNHTGIDLVGTIIATIKGSNEEDTDTPLFIGKVRTLEFPFVNGSAEIMSLVLAESSPGRDSTEYFIVFEPRLPLL
STMI:
DO_DISOPRED3: DDDDDDDDDD.........................DD.DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A: ....................................................................................................
DO_SPOTD: ....................................................................................................
CONSENSUS: ....................................................................................................
CONSENSUS_MOBI: ....................................................................................................
1620 1640 1660 1680 1700
AA: SRTLEPYILPFMFYNDVKKQQQMAALTKEKDQLSQSIVMYKSLFEASQQLLNEMKCQVEEARLKEAQLRNELKIHNIDIPTTQQVPHIEALLKRKLSEQE
STMI:
DO_DISOPRED3: DDDDDDDDDDD...DDDDD.DDDDDDDDDDDDD.DD.............................................................DDD
DO_IUPRED2A: ........................DD........................................................................D.
DO_SPOTD: ....................................................................................................
CONSENSUS: ........................DD........................................................................DD
CONSENSUS_MOBI: ....................................................................................................
1720 1740 1760 1780 1800
AA: ELKKKPRRSCTLPNYTKGSGDVLGKIAHLAQIEDDRAAMVISWHLASDMDCVVTLTTDAARRIYDETQGRQQVLPLDSIYKKTLPDWKRSLPHFRNGKLY
STMI:
DO_DISOPRED3: DDDDDDDDDDDDDD....................................................................DDDDDDDDDDDDDDDDD.
DO_IUPRED2A: ..DD..DDDDD.........................................................................................
DO_SPOTD: DDDDDDDDD...........................................................................................
CONSENSUS: DDDDDDDDDDD.........................................................................................
CONSENSUS_MOBI: ....................................................................................................
1820 1840 1860 1880 1900
AA: FKPIGDPVFARDLLTFPDNVEHCETVFGMLLGDTIILDNLDAANHYRKEVVKITHCPTLLTRDGDRIRSNGKFGGLQNKAPPMDKLRGMVFGAPVPKQCL
STMI:
DO_DISOPRED3: .....................................................................DDDDDDDDDDDDDDDDDDDDDDDDDD..D..
DO_IUPRED2A: ......................................................................DDDDD..DD.......DD............
DO_SPOTD: ....................................................................................................
CONSENSUS: ......................................................................DDDDDDDDD.......DD............
CONSENSUS_MOBI: ....................................................................................................
1920 1940 1960 1980 2000
AA: ILGEQIDLLQQYRSAVCKLDSVNKDLNSQLEYLRTPDMRKKKQELDEHEKNLKLIEEKLGMTPIRKCNDSLRHSPKVETTDCPVPPKRMRREATRQNRII
STMI:
DO_DISOPRED3: ...........D..D..DD.DDDDD..DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A: .............................DDDDDDDDDDDDDDDDDDDDDDDD..D........DDDDDDDDD.DDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD: ..................................DDD............DDD....DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
CONSENSUS: .............................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
CONSENSUS_MOBI: ....................................................................................................
RICH_[PR]: RhsPkvettdcPvPPkRmRR
RICH_[E]: EldEhEknlkliEE
RICH_[K]: KKKqeldeheKnlKlieeK
RICH_[R]: RhspkvettdcpvppkRmRReatRqnR
RICH_[CP]: CndslrhsPkvettdCPvPP
RICH_[EK]: EylrtpdmrKKKqEldEhEK
RICH_[EL]: ELdEhEknLkLiEEkL
RICH_[IR]: RmRReatRqnRII
RICH_[IT]: TrqnrII
RICH_[KL]: KKKqeLdeheKnLKLieeKL
RICH_fLPS_[K]: rKKKqeldeheKnlKlieeK
AA: TKTDV
STMI:
DO_DISOPRED3: DDDDD
DO_IUPRED2A: DDDD.
DO_SPOTD: DDDDD
CONSENSUS: DDDDD
CONSENSUS_MOBI: .....
RICH_[IT]: TkT