O60260 PRKN_HUMAN
Gene name: PRKN
Protein name: E3 ubiquitin-protein ligase parkin
List of terms from Generic GO subset, which this protein is a part of:
- anatomical structure development GO:0048856
- biological process involved in symbiotic interaction GO:0044403
- biosynthetic process GO:0009058
- carbohydrate metabolic process GO:0005975
- catabolic process GO:0009056
- cell death GO:0008219
- cell differentiation GO:0030154
- cell morphogenesis GO:0000902
- cell-cell signaling GO:0007267
- cellular component assembly GO:0022607
- cellular nitrogen compound metabolic process GO:0034641
- cellular protein modification process GO:0006464
- cytoskeleton organization GO:0007010
- growth GO:0040007
- homeostatic process GO:0042592
- membrane organization GO:0061024
- nervous system process GO:0050877
- protein targeting GO:0006605
- protein transport GO:0015031
- protein-containing complex assembly GO:0065003
- response to stress GO:0006950
- signal transduction GO:0007165
- small molecule metabolic process GO:0044281
- transport GO:0006810
- vesicle-mediated transport GO:0016192
Table: Top 10 the most similar proteins, based on disordered regions enriched in particular amino acids. Cosine similarity calculation is described here. The whole list can be downloaded at the Download page
| # | UniProt Accession | Gene Name | Cosine Similarity | Generic GO terms |
|---|---|---|---|---|
| 1 | Q6U736 | OPN5 | 0.53788 | anatomical structure development GO:0048856 cellular protein modification process GO:0006464 nervous system process GO:0050877 ... |
| 2 | Q8TB61 | SLC35B2 | 0.53788 | biosynthetic process GO:0009058 cellular nitrogen compound metabolic process GO:0034641 signal transduction GO:0007165 ... |
| 3 | Q6P1M0 | SLC27A4 | 0.53418 | anatomical structure development GO:0048856 catabolic process GO:0009056 circulatory system process GO:0003013 ... |
| 4 | P10635 | CYP2D6 | 0.52331 | biosynthetic process GO:0009058 catabolic process GO:0009056 cellular nitrogen compound metabolic process GO:0034641 ... |
| 5 | P52740 | ZNF132 | 0.47598 | biosynthetic process GO:0009058 cellular nitrogen compound metabolic process GO:0034641 |
| 6 | P04201 | MAS1 | 0.4713 | signal transduction GO:0007165 |
| 7 | Q16696 | CYP2A13 | 0.46383 | catabolic process GO:0009056 small molecule metabolic process GO:0044281 |
| 8 | P20853 | CYP2A7 | 0.46383 | catabolic process GO:0009056 small molecule metabolic process GO:0044281 |
| 9 | O95156 | NXPH2 | 0.46362 | signal transduction GO:0007165 |
| 10 | Q6P9A2 | GALNT18 | 0.4496 | biosynthetic process GO:0009058 cellular protein modification process GO:0006464 |
20 40 60 80 100 AA: MIVFVRFNSSHGFPVEVDSDTSIFQLKEVVAKRQGVPADQLRVIFAGKELRNDWTVQNCDLDQQSIVHIVQRPWRKGQEMNATGGDDPRNAAGGCEREPQ STMI: DO_DISOPRED3: D..........................................................................DDDDDDDDDDDDDDDDDDDDDDDDD DO_IUPRED2A: ............................................................................DDDDDDDDDDDDDDDDDDDDDDDD DO_SPOTD: ...........................................................................DDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS: ...........................................................................DDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS_MOBI: ...................................................................................DDDDDDDDDDDDDDDD.
120 140 160 180 200 AA: SLTRVDLSSSVLPGDSVGLAVILHTDSRKDSPPAGSPAGRSIYNSFYVYCKGPCQRVQPGKLRVQCSTCRQATLTLTQGPSCWDDVLIPNRMSGECQSPH STMI: DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD............................................................ DO_IUPRED2A: .....DDD..............DDDDDDDDDDDDDDD............................................................... DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD............................................................ CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD............................................................ CONSENSUS_MOBI: ........DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD............................................................ RICH_[V]: VdlsssVlpgdsVglaV RICH_[LV]: LtrVdLsssVLpgdsVgLaV RICH_MOBI_[LV]: VLpgdsVgLaViL
220 240 260 280 300 AA: CPGTSAEFFFKCGAHPTSDKETSVALHLIATNSRNITCITCTDVRSPVLVFQCNSRHVICLDCFHLYCVTRLNDRQFVHDPQLGYSLPCVAGCPNSLIKE STMI: DO_DISOPRED3: .....................DDDD..D........................................................................ DO_IUPRED2A: .................................................................................................... DO_SPOTD: .................DDDDDDDDDD......................................................................... CONSENSUS: .....................DDDD........................................................................... CONSENSUS_MOBI: ....................................................................................................
320 340 360 380 400 AA: LHHFRILGEEQYNRYQQYGAEECVLQMGGVLCPRPGCGAGLLPEPDQRKVTCEGGNGLGCGFAFCRECKEAYHEGECSAVFEASGTTTQAYRVDERAAEQ STMI: DO_DISOPRED3: .................................................................................................... DO_IUPRED2A: ...........................................................................................D........ DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................DD..............
420 440 460 AA: ARWEAASKETIKKTTKPCPRCHVPVEKNGGCMHMKCPQPQCRLEWCWNCGCEWNRVCMGDHWFDV STMI: DO_DISOPRED3: ................................................................. DO_IUPRED2A: ...DDDD.......................................................... DO_SPOTD: ................................................................. CONSENSUS: ................................................................. CONSENSUS_MOBI: .................................................................