O60506 HNRPQ_HUMAN
Gene name: SYNCRIP
Protein name: Heterogeneous nuclear ribonucleoprotein Q
List of terms from Generic GO subset, which this protein is a part of:
- biological process involved in symbiotic interaction GO:0044403
- biosynthetic process GO:0009058
- catabolic process GO:0009056
- cell differentiation GO:0030154
- cellular nitrogen compound metabolic process GO:0034641
- immune system process GO:0002376
- mRNA processing GO:0006397
- nucleobase-containing compound catabolic process GO:0034655
- response to stress GO:0006950
- translation GO:0006412
Table: Top 10 the most similar proteins, based on disordered regions enriched in particular amino acids. Cosine similarity calculation is described here. The whole list can be downloaded at the Download page
| # | UniProt Accession | Gene Name | Cosine Similarity | Generic GO terms |
|---|---|---|---|---|
| 1 | O43390 | HNRNPR | 0.82101 | biosynthetic process GO:0009058 catabolic process GO:0009056 cellular nitrogen compound metabolic process GO:0034641 ... |
| 2 | O43541 | SMAD6 | 0.78829 | anatomical structure development GO:0048856 biosynthetic process GO:0009058 cell adhesion GO:0007155 ... |
| 3 | Q86V81 | ALYREF | 0.77492 | biological process involved in symbiotic interaction GO:0044403 biosynthetic process GO:0009058 cell differentiation GO:0030154 ... |
| 4 | P43116 | PTGER2 | 0.77131 | cell population proliferation GO:0008283 circulatory system process GO:0003013 homeostatic process GO:0042592 ... |
| 5 | Q6UB35 | MTHFD1L | 0.77061 | anatomical structure development GO:0048856 anatomical structure formation involved in morphogenesis GO:0048646 biosynthetic process GO:0009058 ... |
| 6 | Q86X59 | LINC02875 | 0.75984 | |
| 7 | Q9NZI8 | IGF2BP1 | 0.75342 | anatomical structure development GO:0048856 biosynthetic process GO:0009058 catabolic process GO:0009056 ... |
| 8 | Q8N1X5 | n/a | 0.75106 | |
| 9 | Q9UBB5 | MBD2 | 0.73997 | anatomical structure development GO:0048856 biosynthetic process GO:0009058 cell population proliferation GO:0008283 ... |
| 10 | Q9P0K9 | FRRS1L | 0.73611 | signal transduction GO:0007165 |
20 40 60 80 100 AA: MATEHVNGNGTEEPMDTTSAVIHSENFQTLLDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMK STMI: DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDD............................................................................. DO_IUPRED2A: DDDDDDDDDDDDDDDDDDDDDD........................................D..................................... DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDD.............................................................................. CONSENSUS: DDDDDDDDDDDDDDDDDDDDDD.............................................................................. CONSENSUS_MOBI: .................................................................................................... RICH_[T]: TehvngngTeepmdTT RICH_[EN]: EhvNgNgtEE
120 140 160 180 200 AA: TYRQREKQGTKVADSSKGPDEAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSGQQPSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTG STMI: DO_DISOPRED3: ...DDDDDDDDDDDD..................................................................................... DO_IUPRED2A: ......DDDDDDDDDDD.....................DDDD.DDDDDDDDDDDD............................................. DO_SPOTD: ......DDDDDDDDDDDD.................................................................................. CONSENSUS: ......DDDDDDDDDDD................................................................................... CONSENSUS_MOBI: ....................................................................................................
220 240 260 280 300 AA: LNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEYEDHKTAA STMI: DO_DISOPRED3: .................................................................................................... DO_IUPRED2A: .................................................................................................... DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................................
320 340 360 380 400 AA: QARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKAFSQFGKLERVKKLKDYAFIHFDERDGAVKAMEEMNGKDLEGEN STMI: DO_DISOPRED3: ................................D................................................................... DO_IUPRED2A: ........................................................................................DD.D........ DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................................
420 440 460 480 500 AA: IEIVFAKPPDQKRKERKAQRQAAKNQMYDDYYYYGPPHMPPPTRGRGRGGRGGYGYPPDYYGYEDYYDYYGYDYHNYRGGYEDPYYGYEDFQVGARGRGG STMI: DO_DISOPRED3: .........DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.....DDDDDD........DDDDDDDDDDDDDDDDDD DO_IUPRED2A: .D..D.DDDDDDDDDDDDDDDD...........DDD.DDDDDDDDDDDDDDDDDD................................DDDDDDDDDDDDD DO_SPOTD: ..............................................................................................DDDDDD CONSENSUS: .........DDDDDDDDDDDDD...........DDDDDDDDDDDDDDDDDDDDDD................................DDDDDDDDDDDDD CONSENSUS_MOBI: ................................................................................................DDDD RICH_[PR]: PPhmPPPtRgRgRggR RICH_[AG]: GArGrGG RICH_[AR]: ARgRgg RICH_[G]: GpphmppptrGrGrGGrGGyG GarGrGG RICH_[R]: RgRgg RICH_[GP]: GPPhmPPPtrGrGrGGrGGyG RICH_[GR]: GpphmppptRGRGRGGRGGyG GaRGRGG RICH_fLPS_[R]: vgaRgRgg RICH_fLPS_[G]: GarGrGG RICH_fLPS_[GR]: RGRGG RICH_MOBI_[AG]: GrGG RICH_MOBI_[AR]: Rgg RICH_MOBI_[G]: GrGG RICH_MOBI_[R]: Rgg RICH_MOBI_[GR]: GRGG RICH_fLPS_MOBI_[G]: GrGG
520 540 560 580 600 AA: RGARGAAPSRGRGAAPPRGRAGYSQRGGPGSARGVRGARGGAQQQRGRGVRGARGGRGGNVGGKRKADGYNQPDSKRRQTNNQNWGSQPIAQQPLQGGDH STMI: DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_IUPRED2A: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS_MOBI: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD RICH_[QR]: RggaQQQRgRgvRgaRggR RICH_[AG]: rGArGAApsrGrGAApprGrAG RICH_[QY]: QpiaQQplQggdh RICH_[AR]: RgARgAApsRgRgAAppRgRAgysqR RICH_[A]: ArgAApsrgrgAApprgrA RICH_[G]: rGarGaapsrGrGaapprGraGysqrGGpGsarGvrGarGGaqqqrGrGvrGarGGrGGnvGGkrkadG RICH_[N]: NqpdskrrqtNNqN RICH_[Q]: QpdskrrQtnnQnwgsQpiaQQplQ RICH_[R]: RgaRgaapsRgRgaappRgRagysqR RgvRgaRggaqqqRgRgvRgaRggRggnvggkR RICH_[GQ]: GvrGarGGaQQQrGrGvrGarGG QnwGsQpiaQQplQGGdh RICH_[GR]: RGaRGaapsRGRGaappRGRaGysqRGGpGsaRGvRGaRGGaqqqRGRGvRGaRGGRGGnvGGkRkadG RICH_[GY]: GGdh RICH_[NQ]: NQpdskrrQtNNQNwgsQ RICH_fLPS_[Q]: rrQtnnQnwgsQpiaQQplQ RICH_fLPS_[R]: RgaRgaapsRgR RgvRgaRggaqqqRgRgvRgaRggR RICH_fLPS_[G]: rGarGaapsrGrG GraGysqrGGpGsarGvrGarGGaqqqrGrGvrGarGGrGGnvGG RICH_fLPS_[Y]: h RICH_fLPS_[GR]: RGaRGaapsRGRG RGRaGysqRGGpGsaRGvRGaRGGaqqqRGRGvRGaRGGRGGnvGGkR RICH_MOBI_[QR]: RggaQQQRgRgvRgaRggR RICH_MOBI_[AG]: rGArGAApsrGrGAApprGrAG RICH_MOBI_[QY]: QpiaQQplQggdh RICH_MOBI_[AR]: RgARgAApsRgRgAAppRgRAgysqR RICH_MOBI_[A]: ArgAApsrgrgAApprgrA RICH_MOBI_[G]: rGarGaapsrGrGaapprGraGysqrGGpGsarGvrGarGGaqqqrGrGvrGarGGrGGnvGGkrkadG RICH_MOBI_[N]: NqpdskrrqtNNqN RICH_MOBI_[Q]: QpdskrrQtnnQnwgsQpiaQQplQ RICH_MOBI_[R]: RgaRgaapsRgRgaappRgRagysqR RgvRgaRggaqqqRgRgvRgaRggRggnvggkR RICH_MOBI_[GQ]: GvrGarGGaQQQrGrGvrGarGG QnwGsQpiaQQplQGGdh RICH_MOBI_[GR]: RGaRGaapsRGRGaappRGRaGysqRGGpGsaRGvRGaRGGaqqqRGRGvRGaRGGRGGnvGGkRkadG RICH_MOBI_[GY]: GGdh RICH_MOBI_[NQ]: NQpdskrrQtNNQNwgsQ RICH_fLPS_MOBI_[Q]: rrQtnnQnwgsQpiaQQplQ RICH_fLPS_MOBI_[G]: rGarGaapsrGrGaap GraGysqrGGpGsarGvrGarGGaqqqrGrGvrGarGGrGGnvGG RICH_fLPS_MOBI_[QY]: YnQpdskrrQtnnQnwgsQpiaQQplQggdh RICH_fLPS_MOBI_[Y]: lqggdh RICH_fLPS_MOBI_[QN]: yNQpdskrrQtNNQNwgsQpiaQQplQ RICH_fLPS_MOBI_[N]: yNqpdskrrqtNNqN
620 AA: SGNYGYKSENQEFYQDTFGQQWK STMI: DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDD. DO_IUPRED2A: DDDDDDDDDDDDDDDDDDDDDD. DO_SPOTD: DDD.D.................. CONSENSUS: DDDDDDDDDDDDDDDDDDDDDD. CONSENSUS_MOBI: DDDDDDDDDDDDDDDDDDDDDDD RICH_[QY]: sgnYgY RICH_[Q]: QefyQdtfgQQ RICH_[Y]: YgYksenqefY RICH_[FQ]: QeFyQdtFgQQ RICH_[FY]: YgYksenqeFYqdtF RICH_[GQ]: sGnyG RICH_[GY]: sGnYGYksenqefY RICH_fLPS_[Y]: sgnYgYksenqefY RICH_MOBI_[QY]: sgnYgY RICH_MOBI_[Q]: QefyQdtfgQQ RICH_MOBI_[Y]: YgYksenqefY RICH_MOBI_[FQ]: QeFyQdtFgQQ RICH_MOBI_[FY]: YgYksenqeFYqdtF RICH_MOBI_[GQ]: sGnyG RICH_MOBI_[GY]: sGnYGYksenqefY RICH_fLPS_MOBI_[QY]: sgnYgYksenQefYQdtfgQQ RICH_fLPS_MOBI_[Y]: sgnYgYksenqefY