O60663 LMX1B_HUMAN
Gene name: LMX1B
Protein name: LIM homeobox transcription factor 1-beta
List of terms from Generic GO subset, which this protein is a part of:
- anatomical structure development GO:0048856
- biosynthetic process GO:0009058
- cell differentiation GO:0030154
- cellular nitrogen compound metabolic process GO:0034641
- embryo development GO:0009790
Table: Top 10 the most similar proteins, based on disordered regions enriched in particular amino acids. Cosine similarity calculation is described here. The whole list can be downloaded at the Download page
| # | UniProt Accession | Gene Name | Cosine Similarity | Generic GO terms |
|---|---|---|---|---|
| 1 | Q9Y6E0 | STK24 | 0.63941 | anatomical structure development GO:0048856 cell cycle GO:0007049 cell death GO:0008219 ... |
| 2 | Q8N3U4 | STAG2 | 0.59508 | cell cycle GO:0007049 cell division GO:0051301 cellular component assembly GO:0022607 ... |
| 3 | Q16828 | DUSP6 | 0.58992 | anatomical structure development GO:0048856 cell death GO:0008219 cell differentiation GO:0030154 ... |
| 4 | Q8N5D0 | WDTC1 | 0.58806 | anatomical structure development GO:0048856 biosynthetic process GO:0009058 carbohydrate metabolic process GO:0005975 ... |
| 5 | Q5T3F8 | TMEM63B | 0.58686 | |
| 6 | Q96QF7 | GCNA | 0.585 | |
| 7 | P78545 | ELF3 | 0.58045 | anatomical structure development GO:0048856 biosynthetic process GO:0009058 cell differentiation GO:0030154 ... |
| 8 | Q9H8W4 | PLEKHF2 | 0.57556 | protein transport GO:0015031 transport GO:0006810 |
| 9 | Q6PD62 | CTR9 | 0.57128 | anatomical structure development GO:0048856 anatomical structure formation involved in morphogenesis GO:0048646 biosynthetic process GO:0009058 ... |
| 10 | P22607 | FGFR3 | 0.56486 | anatomical structure development GO:0048856 cell death GO:0008219 cell differentiation GO:0030154 ... |
20 40 60 80 100 AA: MDIATGPESLERCFPRGQTDCAKMLDGIKMEEHALRPGPATLGVLLGSDCPHPAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRK STMI: DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD................................................... DO_IUPRED2A: DD.................................................................................................. DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.................................................... CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.................................................... CONSENSUS_MOBI: .................................................................................................... RICH_[GL]: GpatLGvLLG
120 140 160 180 200 AA: LYCKQDYQQLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYEKEKDLLSSVSPDESDSVKSEDEDGDMKPAK STMI: DO_DISOPRED3: ........................................................................DDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_IUPRED2A: ...........................................................................D...DDDDDDDDDDDDDDDDDDDDD DO_SPOTD: .....................................................................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS: ........................................................................DDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS_MOBI: ...........................................................................DDDDDDDDDDDDDDDDDDDDDDDDD RICH_[D]: DllssvspDesDsvkseDeDgD RICH_[G]: Gdmkpak RICH_[K]: KsededgdmKpaK RICH_[S]: SSvSpdeSdSvkS RICH_[DG]: DGDmkpak RICH_[DS]: DllSSvSpDeSDSvkSeDeDgD RICH_[GK]: KpaK RICH_fLPS_[D]: pDesDsvkseDeDgD RICH_MOBI_[D]: DesDsvkseDeDgD RICH_MOBI_[G]: Gdmkpak RICH_MOBI_[K]: KsededgdmKpaK RICH_MOBI_[S]: SSvSpdeSdSvkS RICH_MOBI_[SV]: SVSpdeSdSV RICH_MOBI_[DG]: DGDmkpak RICH_MOBI_[DS]: SSvSpDeSDSvkSeDeDgD RICH_MOBI_[GK]: KpaK RICH_fLPS_MOBI_[D]: pDesDsvkseDeDgD
220 240 260 280 300 AA: GQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRHQQQQEQQNSQRLGQEVLSS STMI: DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDD............................................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_IUPRED2A: DDDDDDDDDDDDDDDDDDDDDDDDDDDDD.......D.......DDD.DDDD....................DDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDD.......D.......DDDDDDDD.................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS_MOBI: DDDDDDDDDDDDDDDDDDDDDDDDDDDDD....................................................................... RICH_[G]: GqGsqskGsGddG RICH_[K]: gqgsqsK RICH_[Q]: QrakmkklarrhQQQQeQQnsQrlgQ RICH_[DG]: GqGsqskGsGDDGkD RICH_[GK]: GqGsqsKGsGddGK RICH_[KR]: RaKmKKlaRR RICH_fLPS_[Q]: klarrhQQQQeQQnsQrlgQ RICH_fLPS_[M]: vlss RICH_MOBI_[G]: GqGsqskGsGddG RICH_MOBI_[K]: gqgsqsK RICH_MOBI_[DG]: GqGsqskGsGDDGkD RICH_MOBI_[GK]: GqGsqsKGsGddGK
320 340 360 380 400 AA: RMEGMMASYTPLAPPQQQIVAMEQSPYGSSDPFQQGLTPPQMPGDHMNPYGNDSIFHDIDSDTSLTSLSDCFLGSSDVGSLQARVGNPIDRLYSMQSSYF STMI: DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD..DDD... DO_IUPRED2A: D..DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.D.....D..D.............D................ DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD... CONSENSUS_MOBI: .........................DDDDDDDDDDDDDDDDDDDDD...................................................... RICH_[PQ]: PlaPPQQQivameQsP RICH_[PY]: YtPlaPPqqqivameqsPY RICH_[QY]: YtplappQQQivameQspY RICH_[D]: DhmnpygnDsifhDiDsDtsltslsDcflgssD RICH_[Q]: QQQivameQspygssdpfQQ RICH_[S]: SdtSltSlSdcflgSSdvgS RICH_[DH]: DHmnpygnDsifHDiD RICH_[DI]: DhmnpygnDsIfhDIDsD RICH_[DS]: DiDSDtSltSlSDcflgSSD RICH_[LS]: SLtSLSdcfLgSSdvgSL RICH_[MQ]: MMasytplappQQQ QQgltppQMpgdhM RICH_fLPS_[Q]: QQQivameQspygssdpfQQ RICH_fLPS_[M]: rMegMM
AA: AS STMI: DO_DISOPRED3: .D DO_IUPRED2A: .. DO_SPOTD: DD CONSENSUS: .D CONSENSUS_MOBI: ..