P02545 LMNA_HUMAN
Gene name: LMNA
Protein name: Prelamin-A/C [Cleaved into: Lamin-A/C
List of terms from Generic GO subset, which this protein is a part of:
- anatomical structure development GO:0048856
- cell cycle GO:0007049
- cell death GO:0008219
- cell differentiation GO:0030154
- cell population proliferation GO:0008283
- cellular nitrogen compound metabolic process GO:0034641
- cellular protein modification process GO:0006464
- chromosome organization GO:0051276
- cytoskeleton organization GO:0007010
- DNA metabolic process GO:0006259
- homeostatic process GO:0042592
- membrane organization GO:0061024
- mitotic cell cycle GO:0000278
- nucleocytoplasmic transport GO:0006913
- protein transport GO:0015031
- response to stress GO:0006950
- signal transduction GO:0007165
- transport GO:0006810
Table: Top 10 the most similar proteins, based on disordered regions enriched in particular amino acids. Cosine similarity calculation is described here. The whole list can be downloaded at the Download page
| # | UniProt Accession | Gene Name | Cosine Similarity | Generic GO terms |
|---|---|---|---|---|
| 1 | Q2KJY2 | KIF26B | 0.65431 |
anatomical structure development
GO:0048856 anatomical structure formation involved in morphogenesis GO:0048646 cell adhesion GO:0007155 ... |
| 2 | Q8IXZ3 | SP8 | 0.64634 |
anatomical structure development
GO:0048856 biosynthetic process GO:0009058 cellular nitrogen compound metabolic process GO:0034641 ... |
| 3 | Q9UPE1 | SRPK3 | 0.63924 |
anatomical structure development
GO:0048856 cell differentiation GO:0030154 cellular component assembly GO:0022607 ... |
| 4 | Q7Z460 | CLASP1 | 0.63584 |
anatomical structure development
GO:0048856 anatomical structure formation involved in morphogenesis GO:0048646 cell adhesion GO:0007155 ... |
| 5 | Q9UIW0 | VAX2 | 0.63449 |
anatomical structure development
GO:0048856 biosynthetic process GO:0009058 cell differentiation GO:0030154 ... |
| 6 | P35568 | IRS1 | 0.62893 |
biosynthetic process
GO:0009058 carbohydrate metabolic process GO:0005975 catabolic process GO:0009056 ... |
| 7 | Q9P2Q2 | FRMD4A | 0.62634 |
protein transport
GO:0015031 transport GO:0006810 |
| 8 | Q12791 | KCNMA1 | 0.62298 |
cell death
GO:0008219 circulatory system process GO:0003013 homeostatic process GO:0042592 ... |
| 9 | Q06945 | SOX4 | 0.62254 |
anatomical structure development
GO:0048856 anatomical structure formation involved in morphogenesis GO:0048646 biosynthetic process GO:0009058 ... |
| 10 | Q8NHY2 | COP1 | 0.62175 |
catabolic process
GO:0009056 cellular protein modification process GO:0006464 |
20 40 60 80 100
AA: METPSQRRATRSGAQASSTPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIKAAYEAELGDARKTLDSVAKERA
STMI:
DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD...........................................................
DO_IUPRED2A: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.............................D.....................................
DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDD...........................................................................
CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD...................................................................
CONSENSUS_MOBI: DDDDDDDDDDDDDDDDDDDDDDDD............................................................................
RICH_[AR]: RRAtRsgAqA
RICH_[R]: RRatRsgaqasstplsptR
RICH_[T]: TrsgaqassTplspTriT
RICH_MOBI_[AR]: RRAtRsgAqA
120 140 160 180 200
AA: RLQLELSKVREEFKELKARNTKKEGDLIAAQARLKDLEALLNSKEAALSTALSEKRTLEGELHDLRGQVAKLEAALGEAKKQLQDEMLRRVDAENRLQTM
STMI:
DO_DISOPRED3: ....................................................................................................
DO_IUPRED2A: ..................................................DDDD..............................DDDDDDDDDDD...D.
DO_SPOTD: ....................................................................................................
CONSENSUS: ....................................................................................................
CONSENSUS_MOBI: ....................................................................................................
220 240 260 280 300
AA: KEELDFQKNIYSEELRETKRRHETRLVEIDNGKQREFESRLADALQELRAQHEDQVEQYKKELEKTYSAKLDNARQSAERNSNLVGAAHEELQQSRIRID
STMI:
DO_DISOPRED3: .....................................................DDD.DDD........................................
DO_IUPRED2A: ..............D.DD..DDDDDDDDDD.........DDDDDD..DD.DDDDDDDDDDDDDD..DDDDDDDDDDDDDDDDDDDDDD..D.........
DO_SPOTD: ....................................................................................................
CONSENSUS: .....................................................DDDDDDD........................................
CONSENSUS_MOBI: ....................................................................................................
320 340 360 380 400
AA: SLSAQLSQLQKQLAAKEAKLRDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERLRLSPSPTSQRSRG
STMI:
DO_DISOPRED3: ............................................................DDDDDDDD.......DDDD.DDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A: ...................DDDDDDDD..DDDDDDDDDDDDDDDDDDDDDDDDD............................DDDDDDDDDDDDDDDDDD
DO_SPOTD: ......................................................................................DDDDDDDDDDDDDD
CONSENSUS: ..................................................................................DDDDDDDDDDDDDDDDDD
CONSENSUS_MOBI: ....DDDDDDDD..........................................................................DDDDDDDDDDDDDD
RICH_[QS]: QrSrg
RICH_[RS]: RlRlSpSptSqRSRg
RICH_[R]: RlRlspsptsqRsRg
RICH_[S]: SpSptSqrSrg
RICH_[GS]: SqrSrG
420 440 460 480 500
AA: RASSHSSQTQGGGSVTKKRKLESTESRSSFSQHARTSGRVAVEEVDEEGKFVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAA
STMI:
DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD..............................................................
DO_IUPRED2A: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.......DDDDDDDD...DDDDDDDDDDD..DD.D.DDDD...............DD
DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDD.D...D.................................................................
CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD..............................................................
CONSENSUS_MOBI: ....................................................................................................
RICH_[QS]: raSShSSQtQ
RICH_[RS]: RaSShSS
RICH_[R]: R
RICH_[S]: raSShSSqtqgggS SteSrSSfSqhartS
RICH_[GK]: GGGsvtKKrK
RICH_[GS]: raSShSSqtqGGGS
520 540 560 580 600
AA: GAGATHSPPTDLVWKAQNTWGCGNSLRTALINSTGEEVAMRKLVRSVTVVEDDEDEDGDDLLHHHHGSHCSSSGDPAEYNLRSRTVLCGTCGQPADKASA
STMI:
DO_DISOPRED3: .............................................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.DDDDDDDDDDDDDD
DO_IUPRED2A: DDD....DDDDDDDD..........................DDDDDDDDDDDDDDDDDDDDDDDDDDDDD.DDDDD.....................DDD
DO_SPOTD: ..................................................DDDDDDDDDDDDDDDDDDDDDDDDDDD...............DDDDDDDD
CONSENSUS: .............................................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD...............DDDDDDDD
CONSENSUS_MOBI: ....................................................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
RICH_[AG]: AdkAsA
RICH_[AS]: ASA
RICH_[D]: DDeDeDgDDllhhhhgshcsssgD
RICH_[S]: Sa
RICH_[DE]: EDDEDEDgDD
RICH_[DH]: DDeDeDgDDllHHHHgsHcsssgD
RICH_[DV]: VtVVeDDeDeDgDD
RICH_[EV]: VtVVEddEdE
RICH_[GS]: Sa
RICH_[HS]: HHHgSHcSSS
RICH_fLPS_[S]: Sa
RICH_MOBI_[AC]: CgtCgqpAdkAsA
RICH_MOBI_[AG]: GtcGqpAdkAsA
RICH_MOBI_[AS]: ASA
RICH_MOBI_[D]: DeDeDgDDllhhhhgshcsssgD
RICH_MOBI_[S]: Sa
RICH_MOBI_[CG]: CGtCGqpadkasa
RICH_MOBI_[DH]: DeDeDgDDllHHHHgsHcsssgD
RICH_MOBI_[GS]: Sa
RICH_MOBI_[HS]: HHHgSHcSSS
RICH_fLPS_MOBI_[D]: DeDeDgDDllhhhhg
RICH_fLPS_MOBI_[H]: dededgddllHHHHgsHcss
RICH_fLPS_MOBI_[HD]: DeDeDgDDllHHHHgsH
620 640 660
AA: SGSGAQVGGPISSGSSASSVTVTRSYRSVGGSGGGSFGDNLVTRSYLLGNSSPRTQSPQNCSIM
STMI:
DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD...D.DDDDDDDDDDDDDDDDDD
DO_IUPRED2A: DDDDDDDDDDDDDDDDDDDD.DDDDD.DDDD.DDD........DDDDDDDDDDDDDDDDDDDDD
DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD..........DDDDDDDDDDDDDD
CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD....DDDDDDDDDDDDDDDDDDDD
CONSENSUS_MOBI: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD....
RICH_[AG]: sGsGAqvGGpissG
RICH_[AS]: SgSgAqvggpiSSgSSA
RICH_[G]: GsGaqvGGpissG
RICH_[S]: SgSgaqvggpiSSgSSaSSvtvtrSyrSvggSgggS
RICH_[V]: VtVtrsyrsV
RICH_[SV]: SSaSSVtVtrSyrSV
RICH_[GS]: SGSGaqvGGpiSSGSSaSS
RICH_fLPS_[S]: SgSgaqvggpiSSgSSaSSvtvtrS
RICH_fLPS_[G]: rsyrsvGGsGGGsfG
RICH_fLPS_[GS]: GGpiSSGSSaSSvtvtrSyrSvGGSGGGSfG
RICH_MOBI_[AC]: sgsgA
RICH_MOBI_[AG]: sGsGAqvGGpissG
RICH_MOBI_[AS]: SgSgAqvggpiSSgSSA
RICH_MOBI_[G]: GsGaqvGGpissG GGsGGGsfGdnlvtrsyllG
RICH_MOBI_[S]: SgSgaqvggpiSSgSSaSSvtvtrSyrS
RICH_MOBI_[V]: VtVtrsyrsV
RICH_MOBI_[SV]: SgSSaSSVtVtrSyrSV
RICH_MOBI_[CG]: sGsG
RICH_MOBI_[GS]: SGSGaqvGGpiSSGSSaSS
RICH_fLPS_MOBI_[S]: piSSgSSaSS
RICH_fLPS_MOBI_[G]: rsyrsvGGsGGGsfG