P02545 LMNA_HUMAN
Gene name: LMNA
Protein name: Prelamin-A/C [Cleaved into: Lamin-A/C
List of terms from Generic GO subset, which this protein is a part of:
- anatomical structure development GO:0048856
- cell cycle GO:0007049
- cell death GO:0008219
- cell differentiation GO:0030154
- cell population proliferation GO:0008283
- cellular nitrogen compound metabolic process GO:0034641
- cellular protein modification process GO:0006464
- chromosome organization GO:0051276
- cytoskeleton organization GO:0007010
- DNA metabolic process GO:0006259
- homeostatic process GO:0042592
- membrane organization GO:0061024
- mitotic cell cycle GO:0000278
- nucleocytoplasmic transport GO:0006913
- protein transport GO:0015031
- response to stress GO:0006950
- signal transduction GO:0007165
- transport GO:0006810
Table: Top 10 the most similar proteins, based on disordered regions enriched in particular amino acids. Cosine similarity calculation is described here. The whole list can be downloaded at the Download page
| # | UniProt Accession | Gene Name | Cosine Similarity | Generic GO terms |
|---|---|---|---|---|
| 1 | Q2KJY2 | KIF26B | 0.65431 | anatomical structure development GO:0048856 anatomical structure formation involved in morphogenesis GO:0048646 cell adhesion GO:0007155 ... |
| 2 | Q8IXZ3 | SP8 | 0.64634 | anatomical structure development GO:0048856 biosynthetic process GO:0009058 cellular nitrogen compound metabolic process GO:0034641 ... |
| 3 | Q9UPE1 | SRPK3 | 0.63924 | anatomical structure development GO:0048856 cell differentiation GO:0030154 cellular component assembly GO:0022607 ... |
| 4 | Q7Z460 | CLASP1 | 0.63584 | anatomical structure development GO:0048856 anatomical structure formation involved in morphogenesis GO:0048646 cell adhesion GO:0007155 ... |
| 5 | Q9UIW0 | VAX2 | 0.63449 | anatomical structure development GO:0048856 biosynthetic process GO:0009058 cell differentiation GO:0030154 ... |
| 6 | P35568 | IRS1 | 0.62893 | biosynthetic process GO:0009058 carbohydrate metabolic process GO:0005975 catabolic process GO:0009056 ... |
| 7 | Q9P2Q2 | FRMD4A | 0.62634 | protein transport GO:0015031 transport GO:0006810 |
| 8 | Q12791 | KCNMA1 | 0.62298 | cell death GO:0008219 circulatory system process GO:0003013 homeostatic process GO:0042592 ... |
| 9 | Q06945 | SOX4 | 0.62254 | anatomical structure development GO:0048856 anatomical structure formation involved in morphogenesis GO:0048646 biosynthetic process GO:0009058 ... |
| 10 | Q8NHY2 | COP1 | 0.62175 | catabolic process GO:0009056 cellular protein modification process GO:0006464 |
20 40 60 80 100 AA: METPSQRRATRSGAQASSTPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVVSREVSGIKAAYEAELGDARKTLDSVAKERA STMI: DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD........................................................... DO_IUPRED2A: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.............................D..................................... DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDD........................................................................... CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD................................................................... CONSENSUS_MOBI: DDDDDDDDDDDDDDDDDDDDDDDD............................................................................ RICH_[AR]: RRAtRsgAqA RICH_[R]: RRatRsgaqasstplsptR RICH_[T]: TrsgaqassTplspTriT RICH_MOBI_[AR]: RRAtRsgAqA
120 140 160 180 200 AA: RLQLELSKVREEFKELKARNTKKEGDLIAAQARLKDLEALLNSKEAALSTALSEKRTLEGELHDLRGQVAKLEAALGEAKKQLQDEMLRRVDAENRLQTM STMI: DO_DISOPRED3: .................................................................................................... DO_IUPRED2A: ..................................................DDDD..............................DDDDDDDDDDD...D. DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................................
220 240 260 280 300 AA: KEELDFQKNIYSEELRETKRRHETRLVEIDNGKQREFESRLADALQELRAQHEDQVEQYKKELEKTYSAKLDNARQSAERNSNLVGAAHEELQQSRIRID STMI: DO_DISOPRED3: .....................................................DDD.DDD........................................ DO_IUPRED2A: ..............D.DD..DDDDDDDDDD.........DDDDDD..DD.DDDDDDDDDDDDDD..DDDDDDDDDDDDDDDDDDDDDD..D......... DO_SPOTD: .................................................................................................... CONSENSUS: .....................................................DDDDDDD........................................ CONSENSUS_MOBI: ....................................................................................................
320 340 360 380 400 AA: SLSAQLSQLQKQLAAKEAKLRDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERLRLSPSPTSQRSRG STMI: DO_DISOPRED3: ............................................................DDDDDDDD.......DDDD.DDDDDDDDDDDDDDDDDDDD DO_IUPRED2A: ...................DDDDDDDD..DDDDDDDDDDDDDDDDDDDDDDDDD............................DDDDDDDDDDDDDDDDDD DO_SPOTD: ......................................................................................DDDDDDDDDDDDDD CONSENSUS: ..................................................................................DDDDDDDDDDDDDDDDDD CONSENSUS_MOBI: ....DDDDDDDD..........................................................................DDDDDDDDDDDDDD RICH_[QS]: QrSrg RICH_[RS]: RlRlSpSptSqRSRg RICH_[R]: RlRlspsptsqRsRg RICH_[S]: SpSptSqrSrg RICH_[GS]: SqrSrG
420 440 460 480 500 AA: RASSHSSQTQGGGSVTKKRKLESTESRSSFSQHARTSGRVAVEEVDEEGKFVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAA STMI: DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.............................................................. DO_IUPRED2A: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.......DDDDDDDD...DDDDDDDDDDD..DD.D.DDDD...............DD DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDD.D...D................................................................. CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.............................................................. CONSENSUS_MOBI: .................................................................................................... RICH_[QS]: raSShSSQtQ RICH_[RS]: RaSShSS RICH_[R]: R RICH_[S]: raSShSSqtqgggS SteSrSSfSqhartS RICH_[GK]: GGGsvtKKrK RICH_[GS]: raSShSSqtqGGGS
520 540 560 580 600 AA: GAGATHSPPTDLVWKAQNTWGCGNSLRTALINSTGEEVAMRKLVRSVTVVEDDEDEDGDDLLHHHHGSHCSSSGDPAEYNLRSRTVLCGTCGQPADKASA STMI: DO_DISOPRED3: .............................................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.DDDDDDDDDDDDDD DO_IUPRED2A: DDD....DDDDDDDD..........................DDDDDDDDDDDDDDDDDDDDDDDDDDDDD.DDDDD.....................DDD DO_SPOTD: ..................................................DDDDDDDDDDDDDDDDDDDDDDDDDDD...............DDDDDDDD CONSENSUS: .............................................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD...............DDDDDDDD CONSENSUS_MOBI: ....................................................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD RICH_[AG]: AdkAsA RICH_[AS]: ASA RICH_[D]: DDeDeDgDDllhhhhgshcsssgD RICH_[S]: Sa RICH_[DE]: EDDEDEDgDD RICH_[DH]: DDeDeDgDDllHHHHgsHcsssgD RICH_[DV]: VtVVeDDeDeDgDD RICH_[EV]: VtVVEddEdE RICH_[GS]: Sa RICH_[HS]: HHHgSHcSSS RICH_fLPS_[S]: Sa RICH_MOBI_[AC]: CgtCgqpAdkAsA RICH_MOBI_[AG]: GtcGqpAdkAsA RICH_MOBI_[AS]: ASA RICH_MOBI_[D]: DeDeDgDDllhhhhgshcsssgD RICH_MOBI_[S]: Sa RICH_MOBI_[CG]: CGtCGqpadkasa RICH_MOBI_[DH]: DeDeDgDDllHHHHgsHcsssgD RICH_MOBI_[GS]: Sa RICH_MOBI_[HS]: HHHgSHcSSS RICH_fLPS_MOBI_[D]: DeDeDgDDllhhhhg RICH_fLPS_MOBI_[H]: dededgddllHHHHgsHcss RICH_fLPS_MOBI_[HD]: DeDeDgDDllHHHHgsH
620 640 660 AA: SGSGAQVGGPISSGSSASSVTVTRSYRSVGGSGGGSFGDNLVTRSYLLGNSSPRTQSPQNCSIM STMI: DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD...D.DDDDDDDDDDDDDDDDDD DO_IUPRED2A: DDDDDDDDDDDDDDDDDDDD.DDDDD.DDDD.DDD........DDDDDDDDDDDDDDDDDDDDD DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD..........DDDDDDDDDDDDDD CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD....DDDDDDDDDDDDDDDDDDDD CONSENSUS_MOBI: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.... RICH_[AG]: sGsGAqvGGpissG RICH_[AS]: SgSgAqvggpiSSgSSA RICH_[G]: GsGaqvGGpissG RICH_[S]: SgSgaqvggpiSSgSSaSSvtvtrSyrSvggSgggS RICH_[V]: VtVtrsyrsV RICH_[SV]: SSaSSVtVtrSyrSV RICH_[GS]: SGSGaqvGGpiSSGSSaSS RICH_fLPS_[S]: SgSgaqvggpiSSgSSaSSvtvtrS RICH_fLPS_[G]: rsyrsvGGsGGGsfG RICH_fLPS_[GS]: GGpiSSGSSaSSvtvtrSyrSvGGSGGGSfG RICH_MOBI_[AC]: sgsgA RICH_MOBI_[AG]: sGsGAqvGGpissG RICH_MOBI_[AS]: SgSgAqvggpiSSgSSA RICH_MOBI_[G]: GsGaqvGGpissG GGsGGGsfGdnlvtrsyllG RICH_MOBI_[S]: SgSgaqvggpiSSgSSaSSvtvtrSyrS RICH_MOBI_[V]: VtVtrsyrsV RICH_MOBI_[SV]: SgSSaSSVtVtrSyrSV RICH_MOBI_[CG]: sGsG RICH_MOBI_[GS]: SGSGaqvGGpiSSGSSaSS RICH_fLPS_MOBI_[S]: piSSgSSaSS RICH_fLPS_MOBI_[G]: rsyrsvGGsGGGsfG