P08670 VIME_HUMAN
Gene name: VIM
Protein name: Vimentin
List of terms from Generic GO subset, which this protein is a part of:
- anatomical structure development GO:0048856
- biological process involved in symbiotic interaction GO:0044403
- biosynthetic process GO:0009058
- catabolic process GO:0009056
- cell differentiation GO:0030154
- cellular nitrogen compound metabolic process GO:0034641
- cytoskeleton organization GO:0007010
- immune system process GO:0002376
- nucleobase-containing compound catabolic process GO:0034655
- response to stress GO:0006950
- signal transduction GO:0007165
- translation GO:0006412
Table: Top 10 the most similar proteins, based on disordered regions enriched in particular amino acids. Cosine similarity calculation is described here. The whole list can be downloaded at the Download page
| # | UniProt Accession | Gene Name | Cosine Similarity | Generic GO terms |
|---|---|---|---|---|
| 1 | Q9NYL2 | MAP3K20 | 0.71697 | anatomical structure development GO:0048856 cell cycle GO:0007049 cell death GO:0008219 ... |
| 2 | P21754 | ZP3 | 0.71238 | anatomical structure development GO:0048856 anatomical structure formation involved in morphogenesis GO:0048646 biosynthetic process GO:0009058 ... |
| 3 | P62995 | TRA2B | 0.69237 | anatomical structure development GO:0048856 cellular nitrogen compound metabolic process GO:0034641 embryo development GO:0009790 ... |
| 4 | Q13515 | BFSP2 | 0.66795 | anatomical structure development GO:0048856 cell differentiation GO:0030154 cytoskeleton organization GO:0007010 ... |
| 5 | B3KS81 | SRRM5 | 0.65426 | |
| 6 | Q9NS56 | TOPORS | 0.64932 | anatomical structure development GO:0048856 anatomical structure formation involved in morphogenesis GO:0048646 biosynthetic process GO:0009058 ... |
| 7 | Q07955 | SRSF1 | 0.6492 | cellular component assembly GO:0022607 cellular nitrogen compound metabolic process GO:0034641 mRNA processing GO:0006397 ... |
| 8 | A7MD48 | SRRM4 | 0.643 | anatomical structure development GO:0048856 cell differentiation GO:0030154 cellular nitrogen compound metabolic process GO:0034641 ... |
| 9 | P30414 | NKTR | 0.64147 | cellular protein modification process GO:0006464 protein folding GO:0006457 |
| 10 | O75494 | SRSF10 | 0.6317 | biosynthetic process GO:0009058 cellular component assembly GO:0022607 cellular nitrogen compound metabolic process GO:0034641 ... |
20 40 60 80 100 AA: MSTRSVSSSSYRRMFGGPGTASRPSSSRSYVTTSTRTYSLGSALRPSTSRSLYASSPGGVYATRSSAVRLRSSVPGVRLLQDSVDFSLADAINTEFKNTR STMI: DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD................... DO_IUPRED2A: .DDD...DDDDDDDDDDDDDDDDDDDDDDDDDD.......DD......D.....DD........DD................................DD DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.................. CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD................... CONSENSUS_MOBI: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.................................................................... RICH_[RS]: RSvSSSSyRRmfggpgtaSR RSSavRlRSS RICH_[RV]: VyatRssaVRlRssVpgVR RICH_[RY]: YRRmfggpgtasRpsssRsY RICH_[R]: RsvssssyRRmfggpgtasR RssavRlRssvpgvR RICH_[S]: StrSvSSSSyrrmfggpgtaSrpSSSrSyvttStrtySlgSalrpStSrSlyaSSpggvyatrSSavrlrSS RICH_[T]: TasrpsssrsyvTTsTrTyslgsalrpsT RICH_[V]: VyatrssaVrlrssVpgV RICH_[ST]: TaSrpSSSrSyvTTSTrTySlgS RICH_[SY]: SrpSSSrSYvttStrtYSlgS StSrSlYaSSpggvYatrSS RICH_[TY]: TasrpsssrsYvTTsTrTYslgsalrpsT RICH_[MS]: MStrSvSSSSyrrM RICH_fLPS_[S]: mStrSvSSSS RICH_MOBI_[RS]: RSvSSSSyRRmfggpgtaSR RICH_MOBI_[RY]: YRRmfggpgtasRpsssRsY RICH_MOBI_[R]: RsvssssyRRmfggpgtasR RICH_MOBI_[MS]: MStrSvSSSSyrrM RICH_fLPS_MOBI_[S]: mStrSvSSSS
120 140 160 180 200 AA: TNEKVELQELNDRFANYIDKVRFLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLAEDIMRLREKLQEEMLQREEAE STMI: DO_DISOPRED3: .D.DDDDDD........................................................................................... DO_IUPRED2A: DDDD..D......................................D.............DDD...............................DD...DD DO_SPOTD: .................................................................................................... CONSENSUS: .DDDDDD............................................................................................. CONSENSUS_MOBI: ....................................................................................................
220 240 260 280 300 AA: NTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHEEEIQELQAQIQEQHVQIDVDVSKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSE STMI: DO_DISOPRED3: .................................................................................................... DO_IUPRED2A: DDDDDDD.....................................D........D.............................................. DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: .................................................DD.................................................
320 340 360 380 400 AA: AANRNNDALRQAKQESTEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATY STMI: DO_DISOPRED3: ............................................................................DDDDDDDDDDDDDDDDD....... DO_IUPRED2A: .DDDDDDDDDDDDDDDD...................DDDDDDDDDDD...D............DDDDDDDDDDDDD........................ DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................................
420 440 460 AA: RKLLEGEESRISLPLPNFSSLNLRETNLDSLPLVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE STMI: DO_DISOPRED3: ...DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD..............DDDDDDDDDDDDD DO_IUPRED2A: ................D...........D.......................DDDDDDDDDDDDDD DO_SPOTD: ..............DDDDDDDDDDDDDDDDDDDDDDDDDDDDD......DDDDDDDDDDDDDDDDD CONSENSUS: ..............DDDDDDDDDDDDDDDDDDDDDDDDD.............DDDDDDDDDDDDDD CONSENSUS_MOBI: .........DDD...................................................... RICH_[L]: LpnfssLnLretnLdsLpL