Q13107 UBP4_HUMAN
Gene name: USP4
Protein name: Ubiquitin carboxyl-terminal hydrolase 4
List of terms from Generic GO subset, which this protein is a part of:
- catabolic process GO:0009056
- cellular component assembly GO:0022607
- cellular nitrogen compound metabolic process GO:0034641
- cellular protein modification process GO:0006464
- mRNA processing GO:0006397
- protein-containing complex assembly GO:0065003
- ribonucleoprotein complex assembly GO:0022618
Table: Top 10 the most similar proteins, based on disordered regions enriched in particular amino acids. Cosine similarity calculation is described here. The whole list can be downloaded at the Download page
| # | UniProt Accession | Gene Name | Cosine Similarity | Generic GO terms |
|---|---|---|---|---|
| 1 | Q4ADV7 | RIC1 | 0.6873 | anatomical structure development GO:0048856 catabolic process GO:0009056 extracellular matrix organization GO:0030198 ... |
| 2 | Q9Y458 | TBX22 | 0.65897 | anatomical structure development GO:0048856 biosynthetic process GO:0009058 cell differentiation GO:0030154 ... |
| 3 | Q92622 | RUBCN | 0.6583 | catabolic process GO:0009056 immune system process GO:0002376 transport GO:0006810 ... |
| 4 | O95248 | SBF1 | 0.64453 | biosynthetic process GO:0009058 cellular protein modification process GO:0006464 reproduction GO:0000003 |
| 5 | P48668 | KRT6C | 0.64231 | anatomical structure development GO:0048856 cell death GO:0008219 cell differentiation GO:0030154 ... |
| 6 | Q5T9C2 | FAM102A | 0.64017 | |
| 7 | Q6ZN18 | AEBP2 | 0.63866 | chromosome organization GO:0051276 |
| 8 | O75143 | ATG13 | 0.63673 | catabolic process GO:0009056 cellular component assembly GO:0022607 cellular protein modification process GO:0006464 ... |
| 9 | O60239 | SH3BP5 | 0.63456 | cellular protein modification process GO:0006464 signal transduction GO:0007165 |
| 10 | Q8IWN7 | RP1L1 | 0.63392 | anatomical structure development GO:0048856 cell differentiation GO:0030154 cellular component assembly GO:0022607 ... |
20 40 60 80 100 AA: MAEGGGCRERPDAETQKSELGPLMRTTLQRGAQWYLIDSRWFKQWKKYVGFDSWDMYNVGEHNLFPGPIDNSGLFSDPESQTLKEHLIDELDYVLVPTEA STMI: DO_DISOPRED3: DDDDDDDDDDDDDD.......................................DDDDDDDD....................................... DO_IUPRED2A: DDDDDDDDDDDDDDDDDDDDDDD....................................................D........................ DO_SPOTD: DDDDDDDDD........................................................................................... CONSENSUS: DDDDDDDDDDDDDD...................................................................................... CONSENSUS_MOBI: DDDDDD..............................................................................................
120 140 160 180 200 AA: WNKLLNWYGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADTIATIEKEMRKLFNIPAERETRLWNKYMSNTYEQLSKLDN STMI: DO_DISOPRED3: ..............................................................................................D..DDD DO_IUPRED2A: .................................................................................................... DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................................
220 240 260 280 300 AA: TVQDAGLYQGQVLVIEPQNEDGTWPRQTLQSKSSTAPSRNFTTSPKSSASPYSSVSASLIANGDSTSTCGMHSSGVSRGGSGFSASYNCQEPPSSHIQPG STMI: DO_DISOPRED3: DDD.......................DD.DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD... DO_IUPRED2A: .................DDDD.DDDDDDDDDDDDDDDDDDDDDDDDDD.....................DDDDD........DDDD.DDD.........D DO_SPOTD: ..............................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.... CONSENSUS: ..........................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.... CONSENSUS_MOBI: ..................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD............................................... RICH_[G]: GdststcGmhssGvsrGGsG RICH_[S]: SkSStapSrnfttSpkSSaSpySSvSaSliangdStStcgmhSSgvSrggSgfSaSyncqeppSS RICH_[T]: TlqskssTapsrnfTT RICH_[ST]: TlqSkSSTapSrnfTTSpkS RICH_[GS]: GdStStcGmhSSGvSrGGSGfSaS RICH_fLPS_[S]: SpkSSaSpySSvSaS RICH_MOBI_[S]: SkSStapSrnfttSpkSSaSpyS RICH_MOBI_[T]: TwprqTlqskssTapsrnfTT RICH_MOBI_[ST]: TlqSkSSTapSrnfTTSpkS
320 340 360 380 400 AA: LCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAF STMI: DO_DISOPRED3: .................................................................................................... DO_IUPRED2A: .........................................DDD........................................................ DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................................
420 440 460 480 500 AA: LLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTLPLPLKKDRVMEVFLVPADPHC STMI: DO_DISOPRED3: .................................................................................................... DO_IUPRED2A: .................................................................................................... DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................DDDDDD..........
520 540 560 580 600 AA: RPTQYRVTVPLMGAVSDLCEALSRLSGIAAENMVVADVYNHRFHKIFQMDEGLNHIMPRDDIFVYEVCSTSVDGSECVTLPVYFRERKSRPSSTSSASAL STMI: DO_DISOPRED3: .....................................................................................DDDDDDDDDDDDD.. DO_IUPRED2A: .............................................................................................DDD.... DO_SPOTD: ........................................................................................DDDDDDDDD... CONSENSUS: ........................................................................................DDDDDDDDD... CONSENSUS_MOBI: ....................................................................................................
620 640 660 680 700 AA: YGQPLLLSVPKHKLTLESLYQAVCDRISRYVKQPLPDEFGSSPLEPGACNGSRNSCEGEDEEEMEHQEEGKEQLSETEGSGEDEPGNDPSETTQKKIKGQ STMI: DO_DISOPRED3: ..................................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_IUPRED2A: ..................................DDDD..DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.. DO_SPOTD: ....................................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD. CONSENSUS: ..................................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD. CONSENSUS_MOBI: ....................................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD. RICH_[E]: EpgacngsrnscEgEdEEEmEhqEEgkEqlsEtEgsgEdE RICH_[CE]: EpgaCngsrnsCEgEdEEEmEhqE RICH_[CG]: GssplepGaCnGsrnsCeG RICH_[EG]: EEGkEqlsEtEGsGEdEpG RICH_MOBI_[E]: EpgacngsrnscEgEdEEEmEhqEEgkEqlsEtEgsgEdE RICH_MOBI_[CE]: EpgaCngsrnsCEgEdEEEmEhqE RICH_MOBI_[CG]: GssplepGaCnGsrnsCeG RICH_MOBI_[EG]: EEGkEqlsEtEGsGEdEpG RICH_fLPS_MOBI_[E]: EgEdEEEmEhqEEgkEqlsEtEgsgEdE
720 740 760 780 800 AA: PCPKRLFTFSLVNSYGTADINSLAADGKLLKLNSRSTLAMDWDSETRRLYYDEQESEAYEKHVSMLQPQKKKKTTVALRDCIELFTTMETLGEHDPWYCP STMI: DO_DISOPRED3: DDDD......................D.D..................................DDDDDDDDDD........................... DO_IUPRED2A: ............................................................DDDDD................................... DO_SPOTD: .............................................................DDDDDDDDDDDD........................... CONSENSUS: .............................................................DDDDDDDDDDDD........................... CONSENSUS_MOBI: ................................................................DDDDDDDDD...........................
820 840 860 880 900 AA: NCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNLSARPYVYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDS STMI: DO_DISOPRED3: .................................................................................................... DO_IUPRED2A: .................................................................................................... DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................................
920 940 960 AA: NVSLASEDQIVTKAAYVLFYQRRDDEFYKTPSLSSSGSSDGGTRPSSSQQGFGDDEACSMDTN STMI: DO_DISOPRED3: ........................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_IUPRED2A: ..............................DDDDDDDDDDDDDDDDDDDDDDDDDDDD....D DO_SPOTD: ........................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS: ........................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS_MOBI: ..............................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD RICH_[S]: SlSSSgSSdggtrpSSS RICH_[GS]: SlSSSGSSdGGtrpSSSqqGfG RICH_MOBI_[S]: SlSSSgSSdggtrpSSS RICH_MOBI_[GS]: SlSSSGSSdGGtrpSSSqqGfG