Q13148 TADBP_HUMAN
Gene name: TARDBP
Protein name: TAR DNA-binding protein 43
List of terms from Generic GO subset, which this protein is a part of:
- biological process involved in symbiotic interaction GO:0044403
- biosynthetic process GO:0009058
- catabolic process GO:0009056
- cell cycle GO:0007049
- cell death GO:0008219
- cell-cell signaling GO:0007267
- cellular nitrogen compound metabolic process GO:0034641
- cellular protein modification process GO:0006464
- membrane organization GO:0061024
- mRNA processing GO:0006397
- nucleobase-containing compound catabolic process GO:0034655
- nucleocytoplasmic transport GO:0006913
- protein transport GO:0015031
- response to stress GO:0006950
- translation GO:0006412
- transport GO:0006810
Table: Top 10 the most similar proteins, based on disordered regions enriched in particular amino acids. Cosine similarity calculation is described here. The whole list can be downloaded at the Download page
| # | UniProt Accession | Gene Name | Cosine Similarity | Generic GO terms |
|---|---|---|---|---|
| 1 | A0A2R8Y4L2 | HNRNPA1P48 | 0.7394 | |
| 2 | P09651 | HNRNPA1 | 0.68092 | biological process involved in symbiotic interaction GO:0044403 biosynthetic process GO:0009058 cellular nitrogen compound metabolic process GO:0034641 ... |
| 3 | Q9UKX7 | NUP50 | 0.67128 | biological process involved in symbiotic interaction GO:0044403 carbohydrate metabolic process GO:0005975 catabolic process GO:0009056 ... |
| 4 | Q6E0U4 | DMKN | 0.66017 | cellular component assembly GO:0022607 membrane organization GO:0061024 plasma membrane organization GO:0007009 |
| 5 | Q32P51 | HNRNPA1L2 | 0.658 | cellular nitrogen compound metabolic process GO:0034641 mRNA processing GO:0006397 transport GO:0006810 |
| 6 | Q9NZL4 | HSPBP1 | 0.63822 | catabolic process GO:0009056 cellular protein modification process GO:0006464 protein folding GO:0006457 |
| 7 | Q96EZ4 | MYEOV | 0.63213 | |
| 8 | Q9NQI0 | DDX4 | 0.62427 | anatomical structure development GO:0048856 cell cycle GO:0007049 cell differentiation GO:0030154 ... |
| 9 | Q9NP98 | MYOZ1 | 0.62004 | anatomical structure development GO:0048856 anatomical structure formation involved in morphogenesis GO:0048646 biosynthetic process GO:0009058 ... |
| 10 | Q9ULC3 | RAB23 | 0.61731 | anatomical structure development GO:0048856 catabolic process GO:0009056 cellular component assembly GO:0022607 ... |
20 40 60 80 100 AA: MSEYIRVTEDENDEPIEIPSEDDGTVLLSTVTAQFPGACGLRYRNPVSQCMRGVRLVEGILHAPDAGWGNLVYVVNYPKDNKRKMDETDASSAVKVKRAV STMI: DO_DISOPRED3: ................D.................................................................DDDDDDDDDDDDDDDDD. DO_IUPRED2A: ..DDDDD.DDDDDDDDDDDDDD..............................................................DDDDDDD.DDD..... DO_SPOTD: ...............................................................................DDDDDDDDDDDDDDDDDDD.. CONSENSUS: ................D.................................................................DDDDDDDDDDDDDDDD.. CONSENSUS_MOBI: ....................................................................................................
120 140 160 180 200 AA: QKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQRHMIDGRWCDCKLPNSKQSQDEPLRSRKVFVGRCTE STMI: DO_DISOPRED3: .................................................................................................... DO_IUPRED2A: .................................................................................................... DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................................
220 240 260 280 300 AA: DMTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQSLCGEDLIIKGISVHISNAEPKHNSNRQLERSGRFGGNPGGFGNQGGFGNSRGGGAGLG STMI: DO_DISOPRED3: ...............................................................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_IUPRED2A: ..........................................................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_SPOTD: ...............................................................DDDDDDDDDDDDDDDDDDD.................. CONSENSUS: ...............................................................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS_MOBI: .....................................................................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDD. RICH_[F]: FggnpggFgnqggF RICH_[G]: GrfGGnpGGfGnqGGfGnsrGGGaGlG RICH_[N]: NqggfgNsrgggaglg RICH_[FG]: GrFGGnpGGFGnqGGFGnsrGGG RICH_[FN]: FggNpggFgNqggFgN RICH_[GN]: GGNpGGfGNqGGfGNsrGGGaGlG RICH_fLPS_[G]: GrfGGnpGGfGnqGGfGnsrGGGaGlG RICH_MOBI_[F]: FggnpggFgnqggF RICH_MOBI_[G]: GrfGGnpGGfGnqGGfGnsrGGGaG RICH_MOBI_[N]: NpggfgNqggfgN RICH_MOBI_[FG]: GrFGGnpGGFGnqGGFGnsrGGGaG RICH_MOBI_[FN]: FggNpggFgNqggFgN RICH_MOBI_[GN]: GGNpGGfGNqGGfGN RICH_fLPS_MOBI_[F]: rFggnpggFgnqggF RICH_fLPS_MOBI_[G]: GrfGGnpGGfGnqGGfGnsrGGGaG RICH_fLPS_MOBI_[GF]: GrFGGnpGGFGnqGGFGnsrGGGaG
320 340 360 380 400 AA: NNQGSNMGGGMNFGAFSINPAMMAAAQAALQSSWGMMGMLASQQNQSGPSGNNQNQGNMQREPNQAFGSGNNSYSGSNSGAAIGWGSASNAGSGSGFNGG STMI: DO_DISOPRED3: DDDD...........................DD..DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_IUPRED2A: DDDDD....DD........................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD..........DD.......D.DDDDD DO_SPOTD: ........................................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS: DDDD...............................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS_MOBI: ............................................................DDDDDDDDD......DDDDDDDDDDDDDDDDDDDD..... RICH_[AG]: GsnsGAAiGwGsAsnAGsGsGfnGG RICH_[AS]: SySgSnSgAAigwgSASnAgSgS RICH_[G]: nnqG GsGnnsysGsnsGaaiGwGsasnaGsGsGfnGG RICH_[N]: NN NqsgpsgNNqNqgNmqrepNqafgsgNNsysgsN RICH_[Q]: QQnQsgpsgnnQnQgnmQrepnQ RICH_[S]: SgnnSySgSnSgaaigwgSaSnagSgS RICH_[FG]: GsGsGFnGG RICH_[GN]: NNqG GmlasqqNqsGpsGNNqNqG NqafGsGNNsysGsNsG NaGsGsGfNG RICH_[GQ]: GmlasQQnQsGpsGnnQnQG RICH_[GS]: GSGnnSySGSnSGaaiGwGSaSnaGSGSGfnGG RICH_[MQ]: MMgMlasQQnQ RICH_[NQ]: QQNQsgpsgNNQNQgNmQrepNQafgsgNN RICH_[NS]: SgNNSySgSNSgaaigwgSaSN RICH_fLPS_[G]: nnqG RICH_MOBI_[AG]: GsnsGAAiGwGsAsnAGsG RICH_MOBI_[AS]: SnSgAAigwgSASnAgSgS RICH_MOBI_[G]: GsnsGaaiGwGsasnaGsG RICH_MOBI_[GS]: GSnSGaaiGwGSaSnaGSGS
AA: FGSSMDSKSSGWGM STMI: DO_DISOPRED3: DDDDDDDDDDDDDD DO_IUPRED2A: DDD....D...DDD DO_SPOTD: DDDDDDDDDDDDDD CONSENSUS: DDDDDDDDDDDDDD CONSENSUS_MOBI: ..DDDDDDDDDDDD RICH_[G]: fGssmdskssGwG RICH_[FG]: FG RICH_[GS]: fGSSmdS RICH_MOBI_[M]: MdskssgwgM