Q13263 TIF1B_HUMAN
Gene name: TRIM28
Protein name: Transcription intermediary factor 1-beta
List of terms from Generic GO subset, which this protein is a part of:
- anatomical structure development GO:0048856
- biological process involved in symbiotic interaction GO:0044403
- biosynthetic process GO:0009058
- cell differentiation GO:0030154
- cellular component assembly GO:0022607
- cellular nitrogen compound metabolic process GO:0034641
- cellular protein modification process GO:0006464
- chromosome organization GO:0051276
- DNA metabolic process GO:0006259
- embryo development GO:0009790
- growth GO:0040007
- immune system process GO:0002376
- nucleocytoplasmic transport GO:0006913
- protein transport GO:0015031
- reproduction GO:0000003
- response to stress GO:0006950
- signal transduction GO:0007165
- transport GO:0006810
Table: Top 10 the most similar proteins, based on disordered regions enriched in particular amino acids. Cosine similarity calculation is described here. The whole list can be downloaded at the Download page
| # | UniProt Accession | Gene Name | Cosine Similarity | Generic GO terms |
|---|---|---|---|---|
| 1 | Q9BX70 | BTBD2 | 0.85212 | anatomical structure development GO:0048856 cell differentiation GO:0030154 |
| 2 | A0A0U1RRK4 | LBHD2 | 0.83113 | |
| 3 | Q9P217 | ZSWIM5 | 0.81198 | anatomical structure development GO:0048856 cell differentiation GO:0030154 cell morphogenesis GO:0000902 |
| 4 | P17535 | JUND | 0.79709 | anatomical structure development GO:0048856 biosynthetic process GO:0009058 cell cycle GO:0007049 ... |
| 5 | Q15270 | NKX1-1 | 0.79319 | biosynthetic process GO:0009058 carbohydrate metabolic process GO:0005975 cell differentiation GO:0030154 ... |
| 6 | O60548 | FOXD2 | 0.78997 | anatomical structure development GO:0048856 biosynthetic process GO:0009058 cell differentiation GO:0030154 ... |
| 7 | Q9H7X3 | ZNF696 | 0.76311 | biosynthetic process GO:0009058 cellular nitrogen compound metabolic process GO:0034641 |
| 8 | P28360 | MSX1 | 0.76033 | anatomical structure development GO:0048856 anatomical structure formation involved in morphogenesis GO:0048646 cell cycle GO:0007049 ... |
| 9 | Q9UBU6 | FAM8A1 | 0.75717 | |
| 10 | P09496 | CLTA | 0.75658 | catabolic process GO:0009056 cell cycle GO:0007049 cell division GO:0051301 ... |
20 40 60 80 100 AA: MAASAAAASAAAASAASGSPGPGEGSAGGEKRSTAPSAAASASASAAASSPAGGGAEALELLEHCGVCRERLRPEREPRLLPCLHSACSACLGPAAPAAA STMI: DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD........................................D DO_IUPRED2A: ...........DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.D...D.............................................. DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.......................................DDD CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.........................................D CONSENSUS_MOBI: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD................................................... RICH_[AG]: AAAsAAAAsAAsGspGpGeGsAGG AAAsspAGGGAeA RICH_[AS]: SAggekrStApSAAASASASAA RICH_[A]: AAsAAAAsAAAAsAAsgspgpgegsAggekrstApsAAAsAsAsAAAsspAgggAeA RICH_[G]: GspGpGeGsaGG RICH_[S]: SaggekrStapSaaaSaSaSaaaSS RICH_fLPS_[A]: AAsAAAAsAAAAsAAsgspgpgegsAggekrstApsAAAsAsAsAAAsspAgggAeA RICH_fLPS_[G]: aasGspGpGeGsaGG RICH_MOBI_[AG]: AAAsAAAAsAAsGspGpGeGsAGG RICH_MOBI_[AS]: SAggekrStApSAAASASASAA RICH_MOBI_[A]: AAsAAAAsAAAAsAAsgspgpgegsAggekrstApsAAAsAsAsAAA RICH_MOBI_[G]: GspGpGeGsaGG RICH_fLPS_MOBI_[A]: AAsAAAAsAAAAsAAsgspgpgegsAggekrstApsAAAsAsAsAAA RICH_fLPS_MOBI_[G]: aasGspGpGeGsaGG
120 140 160 180 200 AA: NSSGDGGAAGDGTVVDCPVCKQQCFSKDIVENYFMRDSGSKAATDAQDANQCCTSCEDNAPATSYCVECSEPLCETCVEAHQRVKYTKDHTVRSTGPAKS STMI: DO_DISOPRED3: DDDDDDDD...................................DD................................................D...... DO_IUPRED2A: .DDDDD..................................D..............................................DDDDDDDDDDD.. DO_SPOTD: DDDDDDDDD........................................................................................... CONSENSUS: DDDDDDDD.....................................................................................D...... CONSENSUS_MOBI: ....................................................................................................
220 240 260 280 300 AA: RDGERTVYCNVHKHEPLVLFCESCDTLTCRDCQLNAHKDHQYQFLEDAVRNQRKLLASLVKRLGDKHATLQKSTKEVRSSIRQVSDVQKRVQVDVKMAIL STMI: DO_DISOPRED3: .DD................................................................................................. DO_IUPRED2A: .....................................................................D...DDD........................ DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: DD.............................................DDD..................................................
320 340 360 380 400 AA: QIMKELNKRGRVLVNDAQKVTEGQQERLERQHWTMTKIQKHQEHILRFASWALESDNNTALLLSKKLIYFQLHRALKMIVDPVEPHGEMKFQWDLNAWTK STMI: DO_DISOPRED3: .................................................................................................... DO_IUPRED2A: ................D......DDDDDDDDDDDD................................................................. DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................................
420 440 460 480 500 AA: SAEAFGKIVAERPGTNSTGPAPMAPPRAPGPLSKQGSGSSQPMEVQEGYGFGSGDDPYSSAEPHVSGVKRSRSGEGEVSGLMRKVPRVSLERLDLDLTAD STMI: DO_DISOPRED3: .................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_IUPRED2A: .....D.DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD...DDDDDDDDD.D DO_SPOTD: .............DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS: .............DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS_MOBI: ..........DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.................... RICH_[AP]: PAPmAPPrAP RICH_[G]: GsGssqpmevqeGyGfGsG RICH_[P]: PaPmaPPraPgP RICH_[R]: RsRsgegevsglmRkvpR RICH_[Y]: YgfgsgddpY RICH_[GP]: GPaPmaPPraPGPlskqGsG RICH_[GY]: GYGfGsGddpYssaephvsG RICH_MOBI_[AP]: PAPmAPPrAP RICH_MOBI_[G]: GsGssqpmevqeGyGfGsG RICH_MOBI_[P]: PgtnstgPaPmaPPraPgP RICH_MOBI_[Y]: YgfgsgddpY RICH_MOBI_[GP]: GPaPmaPPraPGPlskqGsG RICH_MOBI_[GY]: GYGfGsGddpYssaephvsG
520 540 560 580 600 AA: SQPPVFKVFPGSTTEDYNLIVIERGAAAAATGQPGTAPAGTPGAPPLAGMAIVKEEETEAAIGAPPTATEGPETKPVLMALAEGPGAEGPRLASPSGSTS STMI: DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_IUPRED2A: DDDDDDDDDDD.......DDDDDDDD.DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS_MOBI: ...................................................................................DDDDDDDDDDDDDDDDD RICH_[PT]: TeaaigaPPTaTegPeTkP RICH_[AE]: ApplAgmAivkEEEtEAAigApptAtEgpE RICH_[AG]: GAAAAAtGqpGtApAGtpGApplAGmA AlAeGpGAeGprlAspsG RICH_[AI]: IvIergAAAAA RICH_[AP]: AAAAAtgqPgtAPAgtPgAPPlAgmA AAigAPPtAtegPetkPvlmA RICH_[AT]: TeAAigAppTATegpeT RICH_[A]: AAAAAtgqpgtApAgtpgApplA RICH_[E]: EEEtEaaigapptatEgpE RICH_[S]: SpSgStS RICH_[T]: TeaaigappTaTegpeT RICH_[EG]: EGpEtkpvlmalaEGpGaEG RICH_[EP]: EtEaaigaPPtatEgPEtkP RICH_[ET]: EEETEaaigappTaTEgpET RICH_[GP]: GqPGtaPaGtPGaPPlaG GPetkPvlmalaeGPGaeGP
620 640 660 680 700 AA: SGLEVVAPEGTSAPGGGPGTLDDSATICRVCQKPGDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLPDLKEEDGSLSLDGADSTGVVAKLSPAN STMI: DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDD....................................................DDDDDDDDDDDDDDDDDDD...... DO_IUPRED2A: DDDDDDDDDDDDDDDDDDDD...........................................................DDDDD................ DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDD.....................................................DDDDDDDDDDDDDDD......... CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDD.....................................................DDDDDDDDDDDDDDD......... CONSENSUS_MOBI: DDDDDDDDDDDDDDDDDD.................................................................................. RICH_[G]: GlevvapeGtsapGGGpG RICH_[S]: SglevvapegtS
720 740 760 780 800 AA: QRKCERVLLALFCHEPCRPLHQLATDSTFSLDQPGGTLDLTLIRARLQEKLSPPYSSPQEFAQDVGRMFKQFNKLTEDKADVQSIIGLQRFFETRMNEAF STMI: DO_DISOPRED3: .................................................................................................... DO_IUPRED2A: .....................................................DDDDD.......................................... DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................................
820 AA: GDTKFSAVLVEPPPMSLPGAGLSSQELSGGPGDGP STMI: DO_DISOPRED3: .......DDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_IUPRED2A: ..........D....DDDDDDDDDDDDDDDDDDDD DO_SPOTD: ......DDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS: .......DDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS_MOBI: ..............DDDDDDDDDDDDDDDDDDDDD RICH_[G]: GaGlssqelsGGpGdG RICH_[GP]: PPPmslPGaGlssqelsGGPG RICH_[LP]: LvePPPmsLPgagLssqeL RICH_MOBI_[G]: GaGlssqelsGGpGdG