Q13263 TIF1B_HUMAN
Gene name: TRIM28
Protein name: Transcription intermediary factor 1-beta
List of terms from Generic GO subset, which this protein is a part of:
- anatomical structure development GO:0048856
- biological process involved in symbiotic interaction GO:0044403
- biosynthetic process GO:0009058
- cell differentiation GO:0030154
- cellular component assembly GO:0022607
- cellular nitrogen compound metabolic process GO:0034641
- cellular protein modification process GO:0006464
- chromosome organization GO:0051276
- DNA metabolic process GO:0006259
- embryo development GO:0009790
- growth GO:0040007
- immune system process GO:0002376
- nucleocytoplasmic transport GO:0006913
- protein transport GO:0015031
- reproduction GO:0000003
- response to stress GO:0006950
- signal transduction GO:0007165
- transport GO:0006810
Table: Top 10 the most similar proteins, based on disordered regions enriched in particular amino acids. Cosine similarity calculation is described here. The whole list can be downloaded at the Download page
# | UniProt Accession | Gene Name | Cosine Similarity | Generic GO terms |
---|---|---|---|---|
1 | Q9BX70 | BTBD2 | 0.85212 |
anatomical structure development
GO:0048856 cell differentiation GO:0030154 |
2 | A0A0U1RRK4 | LBHD2 | 0.83113 | |
3 | Q9P217 | ZSWIM5 | 0.81198 |
anatomical structure development
GO:0048856 cell differentiation GO:0030154 cell morphogenesis GO:0000902 |
4 | P17535 | JUND | 0.79709 |
anatomical structure development
GO:0048856 biosynthetic process GO:0009058 cell cycle GO:0007049 ... |
5 | Q15270 | NKX1-1 | 0.79319 |
biosynthetic process
GO:0009058 carbohydrate metabolic process GO:0005975 cell differentiation GO:0030154 ... |
6 | O60548 | FOXD2 | 0.78997 |
anatomical structure development
GO:0048856 biosynthetic process GO:0009058 cell differentiation GO:0030154 ... |
7 | Q9H7X3 | ZNF696 | 0.76311 |
biosynthetic process
GO:0009058 cellular nitrogen compound metabolic process GO:0034641 |
8 | P28360 | MSX1 | 0.76033 |
anatomical structure development
GO:0048856 anatomical structure formation involved in morphogenesis GO:0048646 cell cycle GO:0007049 ... |
9 | Q9UBU6 | FAM8A1 | 0.75717 | |
10 | P09496 | CLTA | 0.75658 |
catabolic process
GO:0009056 cell cycle GO:0007049 cell division GO:0051301 ... |
20 40 60 80 100
AA: MAASAAAASAAAASAASGSPGPGEGSAGGEKRSTAPSAAASASASAAASSPAGGGAEALELLEHCGVCRERLRPEREPRLLPCLHSACSACLGPAAPAAA
STMI:
DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD........................................D
DO_IUPRED2A: ...........DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.D...D..............................................
DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.......................................DDD
CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.........................................D
CONSENSUS_MOBI: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD...................................................
RICH_[AG]: AAAsAAAAsAAsGspGpGeGsAGG AAAsspAGGGAeA
RICH_[AS]: SAggekrStApSAAASASASAA
RICH_[A]: AAsAAAAsAAAAsAAsgspgpgegsAggekrstApsAAAsAsAsAAAsspAgggAeA
RICH_[G]: GspGpGeGsaGG
RICH_[S]: SaggekrStapSaaaSaSaSaaaSS
RICH_fLPS_[A]: AAsAAAAsAAAAsAAsgspgpgegsAggekrstApsAAAsAsAsAAAsspAgggAeA
RICH_fLPS_[G]: aasGspGpGeGsaGG
RICH_MOBI_[AG]: AAAsAAAAsAAsGspGpGeGsAGG
RICH_MOBI_[AS]: SAggekrStApSAAASASASAA
RICH_MOBI_[A]: AAsAAAAsAAAAsAAsgspgpgegsAggekrstApsAAAsAsAsAAA
RICH_MOBI_[G]: GspGpGeGsaGG
RICH_fLPS_MOBI_[A]: AAsAAAAsAAAAsAAsgspgpgegsAggekrstApsAAAsAsAsAAA
RICH_fLPS_MOBI_[G]: aasGspGpGeGsaGG
120 140 160 180 200
AA: NSSGDGGAAGDGTVVDCPVCKQQCFSKDIVENYFMRDSGSKAATDAQDANQCCTSCEDNAPATSYCVECSEPLCETCVEAHQRVKYTKDHTVRSTGPAKS
STMI:
DO_DISOPRED3: DDDDDDDD...................................DD................................................D......
DO_IUPRED2A: .DDDDD..................................D..............................................DDDDDDDDDDD..
DO_SPOTD: DDDDDDDDD...........................................................................................
CONSENSUS: DDDDDDDD.....................................................................................D......
CONSENSUS_MOBI: ....................................................................................................
220 240 260 280 300
AA: RDGERTVYCNVHKHEPLVLFCESCDTLTCRDCQLNAHKDHQYQFLEDAVRNQRKLLASLVKRLGDKHATLQKSTKEVRSSIRQVSDVQKRVQVDVKMAIL
STMI:
DO_DISOPRED3: .DD.................................................................................................
DO_IUPRED2A: .....................................................................D...DDD........................
DO_SPOTD: ....................................................................................................
CONSENSUS: ....................................................................................................
CONSENSUS_MOBI: DD.............................................DDD..................................................
320 340 360 380 400
AA: QIMKELNKRGRVLVNDAQKVTEGQQERLERQHWTMTKIQKHQEHILRFASWALESDNNTALLLSKKLIYFQLHRALKMIVDPVEPHGEMKFQWDLNAWTK
STMI:
DO_DISOPRED3: ....................................................................................................
DO_IUPRED2A: ................D......DDDDDDDDDDDD.................................................................
DO_SPOTD: ....................................................................................................
CONSENSUS: ....................................................................................................
CONSENSUS_MOBI: ....................................................................................................
420 440 460 480 500
AA: SAEAFGKIVAERPGTNSTGPAPMAPPRAPGPLSKQGSGSSQPMEVQEGYGFGSGDDPYSSAEPHVSGVKRSRSGEGEVSGLMRKVPRVSLERLDLDLTAD
STMI:
DO_DISOPRED3: .................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A: .....D.DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD...DDDDDDDDD.D
DO_SPOTD: .............DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
CONSENSUS: .............DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
CONSENSUS_MOBI: ..........DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD....................
RICH_[AP]: PAPmAPPrAP
RICH_[G]: GsGssqpmevqeGyGfGsG
RICH_[P]: PaPmaPPraPgP
RICH_[R]: RsRsgegevsglmRkvpR
RICH_[Y]: YgfgsgddpY
RICH_[GP]: GPaPmaPPraPGPlskqGsG
RICH_[GY]: GYGfGsGddpYssaephvsG
RICH_MOBI_[AP]: PAPmAPPrAP
RICH_MOBI_[G]: GsGssqpmevqeGyGfGsG
RICH_MOBI_[P]: PgtnstgPaPmaPPraPgP
RICH_MOBI_[Y]: YgfgsgddpY
RICH_MOBI_[GP]: GPaPmaPPraPGPlskqGsG
RICH_MOBI_[GY]: GYGfGsGddpYssaephvsG
520 540 560 580 600
AA: SQPPVFKVFPGSTTEDYNLIVIERGAAAAATGQPGTAPAGTPGAPPLAGMAIVKEEETEAAIGAPPTATEGPETKPVLMALAEGPGAEGPRLASPSGSTS
STMI:
DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A: DDDDDDDDDDD.......DDDDDDDD.DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
CONSENSUS_MOBI: ...................................................................................DDDDDDDDDDDDDDDDD
RICH_[PT]: TeaaigaPPTaTegPeTkP
RICH_[AE]: ApplAgmAivkEEEtEAAigApptAtEgpE
RICH_[AG]: GAAAAAtGqpGtApAGtpGApplAGmA AlAeGpGAeGprlAspsG
RICH_[AI]: IvIergAAAAA
RICH_[AP]: AAAAAtgqPgtAPAgtPgAPPlAgmA AAigAPPtAtegPetkPvlmA
RICH_[AT]: TeAAigAppTATegpeT
RICH_[A]: AAAAAtgqpgtApAgtpgApplA
RICH_[E]: EEEtEaaigapptatEgpE
RICH_[S]: SpSgStS
RICH_[T]: TeaaigappTaTegpeT
RICH_[EG]: EGpEtkpvlmalaEGpGaEG
RICH_[EP]: EtEaaigaPPtatEgPEtkP
RICH_[ET]: EEETEaaigappTaTEgpET
RICH_[GP]: GqPGtaPaGtPGaPPlaG GPetkPvlmalaeGPGaeGP
620 640 660 680 700
AA: SGLEVVAPEGTSAPGGGPGTLDDSATICRVCQKPGDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLPDLKEEDGSLSLDGADSTGVVAKLSPAN
STMI:
DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDD....................................................DDDDDDDDDDDDDDDDDDD......
DO_IUPRED2A: DDDDDDDDDDDDDDDDDDDD...........................................................DDDDD................
DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDD.....................................................DDDDDDDDDDDDDDD.........
CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDD.....................................................DDDDDDDDDDDDDDD.........
CONSENSUS_MOBI: DDDDDDDDDDDDDDDDDD..................................................................................
RICH_[G]: GlevvapeGtsapGGGpG
RICH_[S]: SglevvapegtS
720 740 760 780 800
AA: QRKCERVLLALFCHEPCRPLHQLATDSTFSLDQPGGTLDLTLIRARLQEKLSPPYSSPQEFAQDVGRMFKQFNKLTEDKADVQSIIGLQRFFETRMNEAF
STMI:
DO_DISOPRED3: ....................................................................................................
DO_IUPRED2A: .....................................................DDDDD..........................................
DO_SPOTD: ....................................................................................................
CONSENSUS: ....................................................................................................
CONSENSUS_MOBI: ....................................................................................................
820
AA: GDTKFSAVLVEPPPMSLPGAGLSSQELSGGPGDGP
STMI:
DO_DISOPRED3: .......DDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A: ..........D....DDDDDDDDDDDDDDDDDDDD
DO_SPOTD: ......DDDDDDDDDDDDDDDDDDDDDDDDDDDDD
CONSENSUS: .......DDDDDDDDDDDDDDDDDDDDDDDDDDDD
CONSENSUS_MOBI: ..............DDDDDDDDDDDDDDDDDDDDD
RICH_[G]: GaGlssqelsGGpGdG
RICH_[GP]: PPPmslPGaGlssqelsGGPG
RICH_[LP]: LvePPPmsLPgagLssqeL
RICH_MOBI_[G]: GaGlssqelsGGpGdG