Q4VXU2 PAP1L_HUMAN
Gene name: PABPC1L
Protein name: Polyadenylate-binding protein 1-like
List of terms from Generic GO subset, which this protein is a part of:
- anatomical structure development GO:0048856
- biosynthetic process GO:0009058
- cell differentiation GO:0030154
- cellular nitrogen compound metabolic process GO:0034641
- chromosome organization GO:0051276
- developmental maturation GO:0021700
- mRNA processing GO:0006397
- reproduction GO:0000003
Table: Top 10 the most similar proteins, based on disordered regions enriched in particular amino acids. Cosine similarity calculation is described here. The whole list can be downloaded at the Download page
| # | UniProt Accession | Gene Name | Cosine Similarity | Generic GO terms |
|---|---|---|---|---|
| 1 | O75949 | FAM155B | 0.76437 | homeostatic process GO:0042592 transmembrane transport GO:0055085 transport GO:0006810 |
| 2 | Q8IY34 | SLC15A3 | 0.7573 | protein transport GO:0015031 transport GO:0006810 |
| 3 | Q13275 | SEMA3F | 0.75153 | anatomical structure development GO:0048856 cell differentiation GO:0030154 cell junction organization GO:0034330 ... |
| 4 | Q9UJM3 | ERRFI1 | 0.74719 | anatomical structure development GO:0048856 biosynthetic process GO:0009058 cell differentiation GO:0030154 ... |
| 5 | Q96A11 | GAL3ST3 | 0.73976 | biosynthetic process GO:0009058 carbohydrate metabolic process GO:0005975 small molecule metabolic process GO:0044281 |
| 6 | A0A1B0GTJ6 | LOC101059948 | 0.73398 | |
| 7 | A6NDS4 | TBC1D3B | 0.73035 | protein transport GO:0015031 transport GO:0006810 |
| 8 | A0A087X1G2 | TBC1D3K | 0.71988 | protein transport GO:0015031 transport GO:0006810 |
| 9 | A0A087X179 | TBC1D3E | 0.71941 | protein transport GO:0015031 transport GO:0006810 |
| 10 | Q8IZP1 | TBC1D3 | 0.71846 | protein transport GO:0015031 transport GO:0006810 |
20 40 60 80 100 AA: MNASGSGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGN STMI: DO_DISOPRED3: DDDDDDDD............................................................................................ DO_IUPRED2A: .................................................................................................... DO_SPOTD: DDDDDD.............................................................................................. CONSENSUS: DDDDDD.............................................................................................. CONSENSUS_MOBI: ....................................................................................................
120 140 160 180 200 AA: IFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPV STMI: DO_DISOPRED3: ...........................................................................DDDDDDDDDDD.............. DO_IUPRED2A: .................................................................................................... DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................................
220 240 260 280 300 AA: DVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKN STMI: DO_DISOPRED3: ..........................................................................DDDDDDDDD................. DO_IUPRED2A: ................................................D.......................DDDDD....................... DO_SPOTD: .................................................................................................... CONSENSUS: ..........................................................................DDD....................... CONSENSUS_MOBI: ....................................................................................................
320 340 360 380 400 AA: LDDSIDDDKLRKEFSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAILTNQYMQRLSTMRTLSNPLLGSF STMI: DO_DISOPRED3: ................................................................................DDDDDDDDDDDDDDDDDDDD DO_IUPRED2A: .................................................DDDD........................DDDD.......D...DDD..... DO_SPOTD: ................................................................................DDDDDDDDDDDDDDDDDDDD CONSENSUS: ................................................................................DDDDDDDDDDDDDDDDDDDD CONSENSUS_MOBI: .................................................................................................... RICH_[FQ]: F
420 440 460 480 500 AA: QQPSSYFLPAMPQPPAQAAYYGCGPVTPTQPAPRWTSQPPRPSCASMVRPPVVPRRPPAHISSVRQASTQVPRTVPHTQRVANIGTQTTGPSGVGCCTPG STMI: DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_IUPRED2A: .......DD.........DDDDDD.....DDDDDDDDDDDDDDDDDDDDDDDD.DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.D..... DO_SPOTD: DDDDDDDD...DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS_MOBI: ..............................DDDDDDDDDDDDDDDDDDDDDDDDDDDD.......................................... RICH_[PQ]: QQPssyflPamPQPPaQ RICH_[PR]: PPRPscasmvRPPvvPRRPP RICH_[PT]: TqTTgPsgvgccTPg RICH_[PV]: PPrPscasmVrPPVVPrrPPahissV RICH_[PY]: PssYflPamPqPPaqaaYYgcgPvtPtqPaPrwtsqP RICH_[QY]: QQpssYflpampQppaQaaY RICH_[AP]: PssyflPAmPqPPAqAAyygcgPvtP RICH_[AQ]: QQpssyflpAmpQppAQAA RICH_[AY]: YflpAmpqppAqAAYY RICH_[A]: AmpqppAqAA RICH_[C]: CCtpg RICH_[RV]: VRppVVpRRppahissVR RICH_[P]: PamPqPPaqaayygcgPvtPtqPaPrwtsqPPrPscasmvrPP RICH_[Q]: QQpssyflpampQppaQ RICH_[R]: RpscasmvRppvvpRR RICH_[T]: TqvprTvphTqrvanigTqTTgpsgvgccT RICH_[V]: VrppVVprrppahissV RICH_[CG]: GtqttGpsGvGCCtpG RICH_[CP]: PsgvgCCtPg RICH_[CT]: TqrvanigTqTTgpsgvgCCT RICH_[FQ]: QQpssyFlpampQ RICH_[GP]: GPsGvGcctPG RICH_[GT]: TqrvaniGTqTTGpsGvGccTpG RICH_fLPS_[P]: PPrPscasmvrPPvvPrrPP RICH_fLPS_[C]: tgpsgvgCCtpg RICH_MOBI_[PR]: PPRPscasmvRPPvvPRRPP RICH_MOBI_[PV]: PPrPscasmVrPPVVPrrPP RICH_MOBI_[P]: PaPrwtsqPPrPscasmvrPP RICH_MOBI_[R]: RpscasmvRppvvpRR
520 540 560 580 600 AA: RPLLPCKCSSAAHSTYRVQEPAVHIPGQEPLTASMLAAAPLHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSELLLMLESPESLHAKIDEAVAVL STMI: DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD........................................................... DO_IUPRED2A: ..................DDDDDDD.DDDD..DDDDDDDD............................................................ DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDD....................................................................... CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD............................................................ CONSENSUS_MOBI: .................................................................................................... RICH_[PT]: rPllP RICH_[AP]: PAvhiPgqePltAsmlAAAP RICH_[C]: rpllpCkC RICH_[CG]: rpllpCkC RICH_[CP]: rPllPCkC RICH_[GP]: rPllP RICH_fLPS_[C]: rpllpCkC
AA: QAHQAMEQPKAYMH STMI: DO_DISOPRED3: ..DDDDDDDDDDDD DO_IUPRED2A: ..........DDDD DO_SPOTD: .....DDDDDDDDD CONSENSUS: .....DDDDDDDDD CONSENSUS_MOBI: ..............