Q5TC82 RC3H1_HUMAN
Gene name: RC3H1
Protein name: Roquin-1
List of terms from Generic GO subset, which this protein is a part of:
- anatomical structure development GO:0048856
- anatomical structure formation involved in morphogenesis GO:0048646
- biosynthetic process GO:0009058
- catabolic process GO:0009056
- cell adhesion GO:0007155
- cell differentiation GO:0030154
- cell population proliferation GO:0008283
- cellular component assembly GO:0022607
- cellular nitrogen compound metabolic process GO:0034641
- cellular protein modification process GO:0006464
- homeostatic process GO:0042592
- immune system process GO:0002376
- nucleobase-containing compound catabolic process GO:0034655
- signal transduction GO:0007165
- translation GO:0006412
Table: Top 10 the most similar proteins, based on disordered regions enriched in particular amino acids. Cosine similarity calculation is described here. The whole list can be downloaded at the Download page
| # | UniProt Accession | Gene Name | Cosine Similarity | Generic GO terms |
|---|---|---|---|---|
| 1 | O00167 | EYA2 | 0.5387 | anatomical structure development GO:0048856 anatomical structure formation involved in morphogenesis GO:0048646 cell death GO:0008219 ... |
| 2 | Q9ULJ6 | ZMIZ1 | 0.52145 | anatomical structure development GO:0048856 biosynthetic process GO:0009058 cell adhesion GO:0007155 ... |
| 3 | Q13285 | NR5A1 | 0.51045 | anatomical structure development GO:0048856 biosynthetic process GO:0009058 cell differentiation GO:0030154 ... |
| 4 | Q99816 | TSG101 | 0.49462 | anatomical structure development GO:0048856 biological process involved in symbiotic interaction GO:0044403 biosynthetic process GO:0009058 ... |
| 5 | Q5HY92 | FIGN | 0.49219 | cell cycle GO:0007049 cell division GO:0051301 cellular nitrogen compound metabolic process GO:0034641 ... |
| 6 | O43734 | TRAF3IP2 | 0.48959 | cell death GO:0008219 immune system process GO:0002376 protein transport GO:0015031 ... |
| 7 | Q9BXY5 | CAPS2 | 0.48902 | |
| 8 | Q9NRQ2 | PLSCR4 | 0.4849 | membrane organization GO:0061024 plasma membrane organization GO:0007009 transport GO:0006810 |
| 9 | Q9NRM1 | ENAM | 0.48395 | anatomical structure development GO:0048856 anatomical structure formation involved in morphogenesis GO:0048646 cell differentiation GO:0030154 ... |
| 10 | Q7Z429 | GRINA | 0.48225 | cell death GO:0008219 homeostatic process GO:0042592 response to stress GO:0006950 ... |
20 40 60 80 100 AA: MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTDIELLPVNSALLQLVGAQVPEQQPITLCSGVEDTKHYEEAK STMI: DO_DISOPRED3: DDD................................................................................................. DO_IUPRED2A: .................................................................................................... DO_SPOTD: DD.................................................................................................. CONSENSUS: DD.................................................................................................. CONSENSUS_MOBI: ....................................................................................................
120 140 160 180 200 AA: KCVEELALYLKPLSSARGVGLNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLSSNLWAAVRARGCQFLGPAMQ STMI: DO_DISOPRED3: .................DDDDDDDDDDD.D...............................................DDDDD.................. DO_IUPRED2A: .................................................................................................... DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................................
220 240 260 280 300 AA: EEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP STMI: DO_DISOPRED3: .................................................................................................... DO_IUPRED2A: .................................................................................................... DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................................
320 340 360 380 400 AA: DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELLANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSK STMI: DO_DISOPRED3: ................................D..................................................................D DO_IUPRED2A: .................DDD.....................D..DD.D...D..DDDDDDDDDDDDDDDDDDDDDDD....................DDD DO_SPOTD: .................................................................DDDDDDDD.D......................DDD CONSENSUS: .................................................................DDDDDDDDDD......................DDD CONSENSUS_MOBI: .................................................................................................... RICH_[K]: K RICH_[HQ]: Hsk RICH_[KQ]: K RICH_[KY]: K
420 440 460 480 500 AA: KGADQQQPPQHSKYKTYMCRDMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSAAILPDEGAVDLPSRKPPALPNGIVST STMI: DO_DISOPRED3: DDDDDDDDDDDDD.................D.DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_IUPRED2A: DDDDDDDDDDDDDDDDDDDDDDD.D....DDDDDD...DDDD..DDDDDDDD.DD.DDDDDDDDDD...DDD.D.DDDDDDDDDDDDDDDDDDDDDDDDD DO_SPOTD: DDDDDDDDDDDDDDDDDDDDD..DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDD....DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS_MOBI: DDDDDDD............................................................................................. RICH_[QY]: QQQppQhskYktYmcrdmkQ RICH_[AP]: AAilPdegAvdlPsrkPPA RICH_[K]: KgadqqqppqhsKyK RICH_[Q]: QQQppQhskyktymcrdmkQ RICH_[R]: RkmnkRlvpRR RICH_[T]: T RICH_[HQ]: kgadQQQppQH RICH_[KQ]: KgadQQQppQhsKyK RICH_[KY]: KgadqqqppqhsKYKtY RICH_[LR]: RkmnkRLvpRRpLsasLgqL
520 540 560 580 600 AA: GNTVTQLIPRGTDPSYDSSLKPGKIDHLSSSAPGSPPDLLESVPKSISALPVNPHSIPPRGPADLPPMPVTKPLQMVPRGSQLYPAQQTDVYYQDPRGAA STMI: DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_IUPRED2A: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS_MOBI: ....DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD......................................................... RICH_[PQ]: PvtkPlQmvPrgsQlyPaQQ RICH_[PS]: SSlkPgkidhlSSSaPgSPP RICH_[PY]: YPaqqtdvYYqdPrgaa RICH_[QY]: QmvprgsQlYpaQQtdvYYQ RICH_[P]: PksisalPvnPhsiPPrgPadlPPmPvtkPlqmvPrgsqlyP RICH_[Q]: QmvprgsQlypaQQtdvyyQ RICH_[S]: SydSSlkpgkidhlSSSapgS RICH_[T]: gnTvTqliprgT RICH_[Y]: YpaqqtdvYY RICH_[MP]: PadlPPMPvtkPlqM RICH_fLPS_[P]: PvnPhsiPPrgPadlPPmPvtkP RICH_fLPS_[Y]: rgsqlYpaqqtdvYY a RICH_MOBI_[LS]: LSSSapgSppdLLeS
620 640 660 680 700 AA: PPFEPAPYQQGMYYTPPPQCVSRFVRPPPSAPEPAPPYLDHYPPYLQERVVNSQYGTQPQQYPPIYPSHYDGRRVYPAPSYTREEIFRESPIPIEIPPAA STMI: DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_IUPRED2A: DDDDDDDDDDDD......DD..DDDDDD.DDDDDDDDDDD.DDD....DDDDDDDDDDDDDDDDDDDDDD..DDDDD.DDD.....DDD..DD....DDD DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS_MOBI: .................................................................................................... RICH_[PQ]: PaPyQQgmyytPPPQ QygtQPQQyPPiyP RICH_[PY]: PPfePaPYqqgmYYtPPPqcvsrfvrPPPsaPePaPPYldhYPPYlqervvnsqY PqqYPPiYPshYdgrrvYPaPsY PieiPPaa RICH_[QY]: YQQgmYYtpppQ YppYlQervvnsQYgtQpQQYppiYpshY RICH_[RY]: YdgRRvYpapsYtReeifR RICH_[I]: IfrespIpIeI RICH_[P]: PPfePaPyqqgmyytPPPqcvsrfvrPPPsaPePaPPyldhyPP PiPieiPPaa RICH_[Q]: QervvnsQygtQpQQ RICH_[R]: RRvypapsytReeifR RICH_[Y]: YldhYppYlqervvnsqYgtqpqqYppiYpshYdgrrvYpapsY RICH_[EI]: EEIfrEspIpIEI RICH_[EP]: PaPsytrEEifrEsPiPiEiPPaa RICH_[EY]: YpapsYtrEEifrEspipiE RICH_[IP]: PaPsytreeIfresPIPIeIPPaa RICH_fLPS_[P]: PPPqcvsrfvrPPPsaPePaPPyldhyPP RICH_fLPS_[YP]: YYtPPPqcvsrfvrPPPsaPePaPPYldhYPPYlqervvnsqYgtqPqqYPPiYPshYdgrrvYPaPsY PiPieiPPaa RICH_fLPS_[PY]: PPPsaPePaPPYldhYPPY RICH_fLPS_[Y]: ppfepapYqqgmYY apepappYldhYppYlqervvnsqYgtqpqqYppiYpshYdgrrvYpapsY RICH_fLPS_[I]: treeIfrespIpIeI
720 740 760 780 800 AA: VPSYVPESRERYQQIESYYPVAPHPTQIRPSYLREPPYSRLPPPPQPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSPTLPPTFHPEEFLDEDLKVAG STMI: DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_IUPRED2A: D.DDDDDD......DDDDDDD....DD.DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.DDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.....D... DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS_MOBI: .................................................................................................... RICH_[PR]: RlPPPPqPhPsldelhRRR RICH_[PY]: vPsYvPesrerY YYPvaPhPtqirPsYlrePPYsrlPPPPqPhP RICH_[QY]: QQiesYYpvaphptQ RICH_[P]: vPsyvP PvaPhPtqirPsylrePPysrlPPPPqPhP PPPfaPsPtlPPtfhP RICH_[R]: RlppppqphpsldelhRRR RICH_[Y]: YvpesrerYqqiesYY RICH_[EP]: vP RICH_[ER]: ElhRRRkEimaqlEER RICH_[FP]: PPPFaPsPtlPPtFhPeeF RICH_[HP]: PPPPqPHPsldelH RICH_[IP]: vPsyvP RICH_fLPS_[P]: PsylrePPysrlPPPPqPhP kvisPPPfaPsPtlPPtfhP RICH_fLPS_[YP]: vPsYvPesrerYqqiesYYPvaPhPtqirPsYlrePPYsrlPPPPqPhP RICH_fLPS_[Y]: YvpesrerYqqiesYYpvaphptqirpsYlreppY
820 840 860 880 900 AA: KYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAAGSVEMMNVESKGMRDQRLDLQRRAAETSDDDLIPFGDRPTVSRFGAISRTSKTIYQGAGPMQAMA STMI: DO_DISOPRED3: DD........................DDDDDDDDDDDDDDDDDDDDDDDDDDD.DD..................................DDDDDDDDDD DO_IUPRED2A: .D..................D....DD.DD.DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD...DD.DD....D..DDDDDDDDDDD DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS: DD..................D....DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD....DDDDDDDDDDDDDD CONSENSUS_MOBI: .................................................................................................... RICH_[D]: DqrlDlqrraaetsDDDlipfgD RICH_[R]: RdqRldlqRR RICH_[V]: VVaagsVemmnV RICH_[DF]: DDlipFgDrptvsrF RICH_[DR]: RDqRlDlqRRaaetsDDD RICH_[MQ]: QgagpMQaMa RICH_[MV]: VVaagsVeMMnV RICH_fLPS_[M]: eMMnveskgM
920 940 960 980 1000 AA: PQGAPTKSINISDYSPYGTHGGWGASPYSPHQNIPSQGHFSERERISMSEVASHGKPLPSAEREQLRLELQQLNHQISQQTQLRGLEAVSNRLVLQREAN STMI: DO_DISOPRED3: DDDDDDD.................DDDDDDDDDDDDDDDDDDDDDDDDDDD.DDDDDDDDDDD.....DD...D.DDDDDDDDDDDDDDDDDDDDDDDDD DO_IUPRED2A: DDDDDDDDDDDDDDDDD..DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.DDDDDDD DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS_MOBI: ...................................................................................................D RICH_[PY]: PYgthggwgasPYsPhqniP RICH_[Q]: QlrlelQQlnhQisQQtQlrgleavsnrlvlQ RICH_[Y]: YspYgthggwgaspY RICH_[GP]: PyGthGGwGasPysPhqniP RICH_[GY]: GaptksinisdYspYGthGG RICH_[LQ]: LpsaereQLrLeLQQLnhQisQQtQLrgL RICH_[MQ]: pQ
1020 1040 1060 1080 1100 AA: TLAGQSQPPPPPPPKWPGMISSEQLSLELHQVEREIGKRTRELSMENQCSLDMKSKLNTSKQAENGQPEPQNKVPAEDLTLTFSDVPNGSALTQENISLL STMI: DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDD...DD.D.D.D.DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_IUPRED2A: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS_MOBI: DDDDDDDDDDDDDDDDDDD......................................DDDDDDDDDDDDDDDDDDDDD...............DDDDDDD RICH_[K]: KsKlntsKqaengqpepqnK RICH_[P]: PPPPPPPkwP RICH_[EL]: LsLELhqvErEigkrtrEL RICH_[ER]: EREigkRtRE RICH_[LN]: LL RICH_[LS]: SLL RICH_[NQ]: NtskQaeNgQpepQN RICH_[NS]: NiSll RICH_MOBI_[L]: LL RICH_MOBI_[N]: NtskqaeNgqpepqN Nisll RICH_MOBI_[P]: PPPPPPPkwP RICH_MOBI_[LN]: NisLL RICH_MOBI_[LS]: SLL RICH_MOBI_[NQ]: NtskQaeNgQpepQN RICH_MOBI_[NS]: NiSll RICH_fLPS_MOBI_[P]: agqsqPPPPPPPkwP
1120 AA: SNKTSSLNLSEDPEGGGDNNDSQRSGVTPSSAP STMI: DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_IUPRED2A: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS_MOBI: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD RICH_[N]: NktsslNlsedpegggdNN RICH_[DG]: DpeGGGDnnD RICH_[DN]: NlseDpegggDNND RICH_[LN]: sNktssLNL RICH_[LS]: SnktSSL RICH_[NS]: SNktSSlNlS RICH_MOBI_[L]: snktssLnL RICH_MOBI_[N]: sNktsslNlsedpegggdNN RICH_MOBI_[DG]: DpeGGGDnnD RICH_MOBI_[DN]: NlseDpegggDNND RICH_MOBI_[LN]: sNktssLNL RICH_MOBI_[LS]: SnktSSLnLS RICH_MOBI_[NS]: SNktSSlNlS