Q86U70 LDB1_HUMAN
Gene name: LDB1
Protein name: LIM domain-binding protein 1
List of terms from Generic GO subset, which this protein is a part of:
- anatomical structure development GO:0048856
- biosynthetic process GO:0009058
- cell adhesion GO:0007155
- cell differentiation GO:0030154
- cell junction organization GO:0034330
- cellular component assembly GO:0022607
- cellular nitrogen compound metabolic process GO:0034641
- cellular protein modification process GO:0006464
- chromosome organization GO:0051276
- homeostatic process GO:0042592
- immune system process GO:0002376
Table: Top 10 the most similar proteins, based on disordered regions enriched in particular amino acids. Cosine similarity calculation is described here. The whole list can be downloaded at the Download page
| # | UniProt Accession | Gene Name | Cosine Similarity | Generic GO terms |
|---|---|---|---|---|
| 1 | Q9ULC3 | RAB23 | 0.55411 |
anatomical structure development
GO:0048856 catabolic process GO:0009056 cellular component assembly GO:0022607 ... |
| 2 | P38435 | GGCX | 0.52213 |
cellular protein modification process
GO:0006464 response to stress GO:0006950 |
| 3 | Q494V2 | CFAP100 | 0.51192 |
cellular component assembly
GO:0022607 cytoskeleton organization GO:0007010 protein-containing complex assembly GO:0065003 |
| 4 | Q16832 | DDR2 | 0.50919 |
anatomical structure development
GO:0048856 biosynthetic process GO:0009058 cell adhesion GO:0007155 ... |
| 5 | O43679 | LDB2 | 0.50475 |
anatomical structure development
GO:0048856 biosynthetic process GO:0009058 cellular nitrogen compound metabolic process GO:0034641 ... |
| 6 | Q15434 | RBMS2 | 0.50166 |
cellular nitrogen compound metabolic process
GO:0034641 |
| 7 | P24863 | CCNC | 0.49608 |
biosynthetic process
GO:0009058 cellular nitrogen compound metabolic process GO:0034641 |
| 8 | Q9H6U6 | BCAS3 | 0.49272 |
anatomical structure development
GO:0048856 anatomical structure formation involved in morphogenesis GO:0048646 biosynthetic process GO:0009058 ... |
| 9 | P22003 | BMP5 | 0.4882 |
anatomical structure development
GO:0048856 anatomical structure formation involved in morphogenesis GO:0048646 biosynthetic process GO:0009058 ... |
| 10 | Q9NZB2 | FAM120A | 0.47973 |
20 40 60 80 100
AA: MSVGCACPGCSSKSFKLYSPKEPPNGNAFPPFHPGTMLDRDVGPTPMYPPTYLEPGIGRHTPYGNQTDYRIFELNKRLQNWTEECDNLWWDAFTTEFFED
STMI:
DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD......................................
DO_IUPRED2A: .........................D..DDDDDD.D...DD...........................................................
DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD......................................
CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD......................................
CONSENSUS_MOBI: ....................................................................................................
RICH_[PY]: PgtmldrdvgPtPmYPPtYlePgigrhtP
RICH_[P]: PkePPngnafPPfhP PtPmyPPtylePgigrhtP
RICH_[CP]: CaCPgCssksfklysPkePP
RICH_[FP]: PkePPngnaFPPFhP
RICH_fLPS_[C]: msvgCaCpgCssksf
120 140 160 180 200
AA: DAMLTITFCLEDGPKRYTIGRTLIPRYFRSIFEGGATELYYVLKHPKEAFHSNFVSLDCDQGSMVTQHGKPMFTQVCVEGRLYLEFMFDDMMRIKTWHFS
STMI:
DO_DISOPRED3: ....................................................................................................
DO_IUPRED2A: ....................................................................................................
DO_SPOTD: ....................................................................................................
CONSENSUS: ....................................................................................................
CONSENSUS_MOBI: ....................................................................................................
220 240 260 280 300
AA: IRQHRELIPRSILAMHAQDPQMLDQLSKNITRCGLSNSTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKTCLFQKWQRMVAPPAEPTRQQPSKRRKRK
STMI:
DO_DISOPRED3: ......................DDD......................................................DDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A: ..................................................................................DDDDDDDDDDDDDDDDDD
DO_SPOTD: ................................................................................DDDDDDDDDDDDDDDDDDDD
CONSENSUS: ................................................................................DDDDDDDDDDDDDDDDDDDD
CONSENSUS_MOBI: ..................................................................................DDDDDDDDDDDDDDDDDD
RICH_[PR]: PPaePtRqqPskRRkR
RICH_[R]: RqqpskRRkR
RICH_MOBI_[R]: RqqpskRRkR
RICH_MOBI_[MR]: RqqpskRRkRk
320 340 360 380 400
AA: MSGGSTMSSGGGNTNNSNSKKKSPASTFALSSQVPDVMVVGEPTLMGGEFGDEDERLITRLENTQFDAANGIDDEDSFNNSPALGANSPWNSKPPSSQES
STMI:
DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
CONSENSUS_MOBI: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDD......................................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
RICH_[PS]: SPalganSPwnSkPPSSqeS
RICH_[QS]: SQeS
RICH_[AD]: DAAngiDDeDsfnnspAlgA
RICH_[AN]: AANgiddedsfNNspAlgAN
RICH_[D]: DaangiDDeD
RICH_[G]: GGstmssGGG
RICH_[N]: NtqfdaaNgiddedsfNN
RICH_[S]: SggStmSSgggntnnSnS SpalganSpwnSkppSSqeS
RICH_[DF]: FDaangiDDeDsF
RICH_[DN]: NtqfDaaNgiDDeDsfNN
RICH_[EG]: GEptlmGGEfGdEdE
RICH_[FN]: FdaaNgiddedsFNN
RICH_[GM]: MsGGstMssGGG
RICH_[GN]: GGstmssGGGNtNNsN
RICH_[GS]: SGGStmSSGGGntnnSnS
RICH_[GV]: VpdVmVVGeptlmGGefG
RICH_[KN]: NtNNsNsKKK
RICH_[KS]: SnSKKKSpaS
RICH_[MV]: VpdVMVVgeptlM
RICH_[NP]: NNsPalgaNsPwNskPP
RICH_[NS]: SggStmSSgggNtNNSNS
RICH_MOBI_[QS]: SQeS
RICH_MOBI_[G]: GGstmssGGG
RICH_MOBI_[N]: NgiddedsfNNspalgaN
RICH_MOBI_[S]: SpwnSkppSSqeS
RICH_MOBI_[DN]: NgiDDeDsfNN
RICH_MOBI_[GM]: MsGGstMssGGG
RICH_MOBI_[GN]: GGstmssGGGNtNNsN
RICH_MOBI_[GS]: SGGStmSSGGGntnnSnS
RICH_MOBI_[KN]: NtNNsNsKKK
RICH_MOBI_[KS]: SnSKKKSpaS
RICH_MOBI_[MN]: MsggstMssgggNtNNsN
RICH_MOBI_[MR]: MsggstM
RICH_MOBI_[MS]: MSggStMSSgggntnnSnS
RICH_MOBI_[NS]: SggStmSSgggNtNNSNS
RICH_fLPS_MOBI_[N]: sgggNtNNsN sfNNspalgaNspwN
AA: KSENPTSQASQ
STMI:
DO_DISOPRED3: DDDDDDDDDDD
DO_IUPRED2A: DDDDDDDDDDD
DO_SPOTD: DDDDDDDDDDD
CONSENSUS: DDDDDDDDDDD
CONSENSUS_MOBI: DDDDDDDDDDD
RICH_[QS]: kSenptSQaSQ
RICH_[S]: kS
RICH_MOBI_[QS]: kSenptSQaSQ
RICH_MOBI_[S]: kS