Q86U70 LDB1_HUMAN
Gene name: LDB1
Protein name: LIM domain-binding protein 1
List of terms from Generic GO subset, which this protein is a part of:
- anatomical structure development GO:0048856
- biosynthetic process GO:0009058
- cell adhesion GO:0007155
- cell differentiation GO:0030154
- cell junction organization GO:0034330
- cellular component assembly GO:0022607
- cellular nitrogen compound metabolic process GO:0034641
- cellular protein modification process GO:0006464
- chromosome organization GO:0051276
- homeostatic process GO:0042592
- immune system process GO:0002376
Table: Top 10 the most similar proteins, based on disordered regions enriched in particular amino acids. Cosine similarity calculation is described here. The whole list can be downloaded at the Download page
| # | UniProt Accession | Gene Name | Cosine Similarity | Generic GO terms |
|---|---|---|---|---|
| 1 | Q9ULC3 | RAB23 | 0.55411 | anatomical structure development GO:0048856 catabolic process GO:0009056 cellular component assembly GO:0022607 ... |
| 2 | P38435 | GGCX | 0.52213 | cellular protein modification process GO:0006464 response to stress GO:0006950 |
| 3 | Q494V2 | CFAP100 | 0.51192 | cellular component assembly GO:0022607 cytoskeleton organization GO:0007010 protein-containing complex assembly GO:0065003 |
| 4 | Q16832 | DDR2 | 0.50919 | anatomical structure development GO:0048856 biosynthetic process GO:0009058 cell adhesion GO:0007155 ... |
| 5 | O43679 | LDB2 | 0.50475 | anatomical structure development GO:0048856 biosynthetic process GO:0009058 cellular nitrogen compound metabolic process GO:0034641 ... |
| 6 | Q15434 | RBMS2 | 0.50166 | cellular nitrogen compound metabolic process GO:0034641 |
| 7 | P24863 | CCNC | 0.49608 | biosynthetic process GO:0009058 cellular nitrogen compound metabolic process GO:0034641 |
| 8 | Q9H6U6 | BCAS3 | 0.49272 | anatomical structure development GO:0048856 anatomical structure formation involved in morphogenesis GO:0048646 biosynthetic process GO:0009058 ... |
| 9 | P22003 | BMP5 | 0.4882 | anatomical structure development GO:0048856 anatomical structure formation involved in morphogenesis GO:0048646 biosynthetic process GO:0009058 ... |
| 10 | Q9NZB2 | FAM120A | 0.47973 |
20 40 60 80 100 AA: MSVGCACPGCSSKSFKLYSPKEPPNGNAFPPFHPGTMLDRDVGPTPMYPPTYLEPGIGRHTPYGNQTDYRIFELNKRLQNWTEECDNLWWDAFTTEFFED STMI: DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD...................................... DO_IUPRED2A: .........................D..DDDDDD.D...DD........................................................... DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD...................................... CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD...................................... CONSENSUS_MOBI: .................................................................................................... RICH_[PY]: PgtmldrdvgPtPmYPPtYlePgigrhtP RICH_[P]: PkePPngnafPPfhP PtPmyPPtylePgigrhtP RICH_[CP]: CaCPgCssksfklysPkePP RICH_[FP]: PkePPngnaFPPFhP RICH_fLPS_[C]: msvgCaCpgCssksf
120 140 160 180 200 AA: DAMLTITFCLEDGPKRYTIGRTLIPRYFRSIFEGGATELYYVLKHPKEAFHSNFVSLDCDQGSMVTQHGKPMFTQVCVEGRLYLEFMFDDMMRIKTWHFS STMI: DO_DISOPRED3: .................................................................................................... DO_IUPRED2A: .................................................................................................... DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................................
220 240 260 280 300 AA: IRQHRELIPRSILAMHAQDPQMLDQLSKNITRCGLSNSTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKTCLFQKWQRMVAPPAEPTRQQPSKRRKRK STMI: DO_DISOPRED3: ......................DDD......................................................DDDDDDDDDDDDDDDDDDDDD DO_IUPRED2A: ..................................................................................DDDDDDDDDDDDDDDDDD DO_SPOTD: ................................................................................DDDDDDDDDDDDDDDDDDDD CONSENSUS: ................................................................................DDDDDDDDDDDDDDDDDDDD CONSENSUS_MOBI: ..................................................................................DDDDDDDDDDDDDDDDDD RICH_[PR]: PPaePtRqqPskRRkR RICH_[R]: RqqpskRRkR RICH_MOBI_[R]: RqqpskRRkR RICH_MOBI_[MR]: RqqpskRRkRk
320 340 360 380 400 AA: MSGGSTMSSGGGNTNNSNSKKKSPASTFALSSQVPDVMVVGEPTLMGGEFGDEDERLITRLENTQFDAANGIDDEDSFNNSPALGANSPWNSKPPSSQES STMI: DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_IUPRED2A: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS_MOBI: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDD......................................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD RICH_[PS]: SPalganSPwnSkPPSSqeS RICH_[QS]: SQeS RICH_[AD]: DAAngiDDeDsfnnspAlgA RICH_[AN]: AANgiddedsfNNspAlgAN RICH_[D]: DaangiDDeD RICH_[G]: GGstmssGGG RICH_[N]: NtqfdaaNgiddedsfNN RICH_[S]: SggStmSSgggntnnSnS SpalganSpwnSkppSSqeS RICH_[DF]: FDaangiDDeDsF RICH_[DN]: NtqfDaaNgiDDeDsfNN RICH_[EG]: GEptlmGGEfGdEdE RICH_[FN]: FdaaNgiddedsFNN RICH_[GM]: MsGGstMssGGG RICH_[GN]: GGstmssGGGNtNNsN RICH_[GS]: SGGStmSSGGGntnnSnS RICH_[GV]: VpdVmVVGeptlmGGefG RICH_[KN]: NtNNsNsKKK RICH_[KS]: SnSKKKSpaS RICH_[MV]: VpdVMVVgeptlM RICH_[NP]: NNsPalgaNsPwNskPP RICH_[NS]: SggStmSSgggNtNNSNS RICH_MOBI_[QS]: SQeS RICH_MOBI_[G]: GGstmssGGG RICH_MOBI_[N]: NgiddedsfNNspalgaN RICH_MOBI_[S]: SpwnSkppSSqeS RICH_MOBI_[DN]: NgiDDeDsfNN RICH_MOBI_[GM]: MsGGstMssGGG RICH_MOBI_[GN]: GGstmssGGGNtNNsN RICH_MOBI_[GS]: SGGStmSSGGGntnnSnS RICH_MOBI_[KN]: NtNNsNsKKK RICH_MOBI_[KS]: SnSKKKSpaS RICH_MOBI_[MN]: MsggstMssgggNtNNsN RICH_MOBI_[MR]: MsggstM RICH_MOBI_[MS]: MSggStMSSgggntnnSnS RICH_MOBI_[NS]: SggStmSSgggNtNNSNS RICH_fLPS_MOBI_[N]: sgggNtNNsN sfNNspalgaNspwN
AA: KSENPTSQASQ STMI: DO_DISOPRED3: DDDDDDDDDDD DO_IUPRED2A: DDDDDDDDDDD DO_SPOTD: DDDDDDDDDDD CONSENSUS: DDDDDDDDDDD CONSENSUS_MOBI: DDDDDDDDDDD RICH_[QS]: kSenptSQaSQ RICH_[S]: kS RICH_MOBI_[QS]: kSenptSQaSQ RICH_MOBI_[S]: kS