Q8IZH2 XRN1_HUMAN
Gene name: XRN1
Protein name: 5'-3' exoribonuclease 1
List of terms from Generic GO subset, which this protein is a part of:
- biosynthetic process GO:0009058
- catabolic process GO:0009056
- cellular nitrogen compound metabolic process GO:0034641
- chromosome organization GO:0051276
- DNA metabolic process GO:0006259
- homeostatic process GO:0042592
- nucleobase-containing compound catabolic process GO:0034655
- translation GO:0006412
Table: Top 10 the most similar proteins, based on disordered regions enriched in particular amino acids. Cosine similarity calculation is described here. The whole list can be downloaded at the Download page
| # | UniProt Accession | Gene Name | Cosine Similarity | Generic GO terms |
|---|---|---|---|---|
| 1 | Q7L4E1 | MIGA2 | 0.77977 | anatomical structure development GO:0048856 |
| 2 | Q9HBG4 | ATP6V0A4 | 0.75919 | homeostatic process GO:0042592 nervous system process GO:0050877 protein transport GO:0015031 ... |
| 3 | O95718 | ESRRB | 0.74342 | anatomical structure development GO:0048856 biosynthetic process GO:0009058 carbohydrate metabolic process GO:0005975 ... |
| 4 | O00338 | SULT1C2 | 0.73576 | |
| 5 | O75626 | PRDM1 | 0.72794 | anatomical structure development GO:0048856 biosynthetic process GO:0009058 cell differentiation GO:0030154 ... |
| 6 | Q6ZMV9 | KIF6 | 0.72352 | |
| 7 | Q9Y653 | ADGRG1 | 0.71998 | anatomical structure development GO:0048856 anatomical structure formation involved in morphogenesis GO:0048646 cell adhesion GO:0007155 ... |
| 8 | Q8WUD1 | RAB2B | 0.69385 | protein transport GO:0015031 signal transduction GO:0007165 transport GO:0006810 ... |
| 9 | Q9H040 | SPRTN | 0.69306 | biosynthetic process GO:0009058 cellular nitrogen compound metabolic process GO:0034641 cellular protein modification process GO:0006464 ... |
| 10 | Q9BZF3 | OSBPL6 | 0.6741 | biosynthetic process GO:0009058 small molecule metabolic process GO:0044281 transport GO:0006810 |
20 40 60 80 100 AA: MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR STMI: DO_DISOPRED3: D................................................................................................... DO_IUPRED2A: ...............................................................................................DDDDD DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................................
120 140 160 180 200 AA: RFRSAKEAEDKIKKAIEKGETLPTEARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRH STMI: DO_DISOPRED3: .................................................................................................... DO_IUPRED2A: DDDDD.......DDDDD.........DD..................................................DDDDDDDDDDDD.......... DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................................
220 240 260 280 300 AA: CLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQRVCAPEETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHL STMI: DO_DISOPRED3: ................................D...DDDDD........................................................... DO_IUPRED2A: ..................................D................................................................. DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................................
320 340 360 380 400 AA: HINHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFESKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWT STMI: DO_DISOPRED3: ..............................................................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_IUPRED2A: .................................................................................................... DO_SPOTD: .................................................................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS: .................................................................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS_MOBI: .................................................................................................... RICH_[AE]: EAAgvAAEEArnykE RICH_[AK]: AAgvAAeeArnyKeKKKlK RICH_[AY]: YlneAAgvAAeeArnY RICH_[K]: KeKKKlKgqenslcwt RICH_[EK]: EaagvaaEEarnyKEKKKlK RICH_[EY]: YlnEaagvaaEEarnYkE
420 440 460 480 500 AA: ALDKNEGEMITSKDNLEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSDDFLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIHNISTLKI STMI: DO_DISOPRED3: DDDDDDDDDDDDDDDDDDD................................................................................. DO_IUPRED2A: .........DDDDDD..................................................................................... DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDD............................................................................ CONSENSUS: DDDDDDDDDDDDDDDDDDD................................................................................. CONSENSUS_MOBI: .................................................................................................... RICH_[K]: aldK
520 540 560 580 600 AA: HFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMTNEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRNQHSECLM STMI: DO_DISOPRED3: .................................................................................................... DO_IUPRED2A: .....................................................................................DD............. DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................................
620 640 660 680 700 AA: CWYDRDTEFIYPSPWPEKFPAIERCCTRYKIISLDAWRVDINKNKITRIDQKALYFCGFPTLKHIRHKFFLKKSGVQVFQQSSRGENMMLEILVDAESDE STMI: DO_DISOPRED3: .......................................................................................DDDDDDDDDDDD. DO_IUPRED2A: .................................................................................................... DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................................
720 740 760 780 800 AA: LTVENVASSVLGKSVFVNWPHLEEARVVAVSDGETKFYLEEPPGTQKLYSGRTAPPSKVVHLGDKEQSNWAKEVQGISEHYLRRKGIIINETSAVVYAQL STMI: DO_DISOPRED3: ........................................D.D.DDD.DDDDDDDD............................................ DO_IUPRED2A: ...............................................DDDD.......DD........................................ DO_SPOTD: .................................................................................................... CONSENSUS: ................................................DDD................................................. CONSENSUS_MOBI: ....................................................................................................
820 840 860 880 900 AA: LTGRKYQINQNGEVRLEKQWSKQVVPFVYQTIVKDIRAFDSRFSNIKTLDDLFPLRSMVFMLGTPYYGCTGEVQDSGDVITEGRIRVIFSIPCEPNLDAL STMI: DO_DISOPRED3: .................................................................................................... DO_IUPRED2A: .................................................................................................... DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................................
920 940 960 980 1000 AA: IQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSRRNPHGDHKANVGLNLKFNKKNEEVPGYTKKVGSEWMYSSAAEQLLAEYLERAPELFSY STMI: DO_DISOPRED3: .................................................................................................... DO_IUPRED2A: ...............................................D.................................................... DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................................
1020 1040 1060 1080 1100 AA: IAKNSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEKIEEEVEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRD STMI: DO_DISOPRED3: .................................................................................................... DO_IUPRED2A: .................................................................................................... DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................................
1120 1140 1160 1180 1200 AA: AEFCLFDRVVNVRENFSVPVGLRGTIIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGSRSETGNQKLTAIVKPQPAVHQHSS STMI: DO_DISOPRED3: .............................................................................DDDDDDDDDDDDDDDDDDDDDDD DO_IUPRED2A: ........................................................................DDDDD...DDDDDDDDDDDDD..DDDDD DO_SPOTD: ...........................................................................DDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS: ...........................................................................DDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS_MOBI: .................................................................................................... RICH_[H]: HqHss RICH_[S]: SS RICH_[HS]: HqHSS RICH_fLPS_[S]: qhSS
1220 1240 1260 1280 1300 AA: SSSVSSGHLGALNHSPQSLFVPTQVPTKDDDEFCNIWQSLQGSGKMQYFQPTIQEKGAVLPQEISQVNQHHKSGFNDNSVKYQQRKHDPHRKFKEECKSP STMI: DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_IUPRED2A: DDDDDDDDD......DDDDDDDDDD.....................DDD.DDDDDD..DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD. DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS_MOBI: .................................................................................................... RICH_[H]: sssvssgHlgalnH RICH_[K]: KyqqrKhdphrKfKeecKsp RICH_[Q]: QslQgsgkmQyfQptiQ QvnQhhksgfndnsvkyQQ RICH_[S]: SSSvSSghlgalnhSpqS RICH_[CE]: EECksp RICH_[CK]: KhdphrKfKeeCKsp RICH_[DF]: FvptqvptkDDDeF RICH_[EK]: KEEcKsp RICH_[HN]: NqHHksgfNdN RICH_[HQ]: QeisQvnQHH RICH_[HS]: SSSvSSgHlgalnHS RICH_[IQ]: QptIQekgavlpQeI RICH_fLPS_[S]: SSSvSS
1320 1340 1360 1380 1400 AA: KAECWSQKMSNKQPNSGIENFLASLNISKENEVQSSHHGEPPSEEHLSPQSFAMGTRMLKEILKIDGSNTVDHKNEIKQIANEIPVSSNRRDEYGLPSQP STMI: DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD..DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_IUPRED2A: ..DDDDDDDDDDD.DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD...DDD..DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS_MOBI: .................................................................................................... RICH_[H]: HHgeppseeH RICH_[I]: IlkIdgsntvdhkneIkqI RICH_[K]: KaecwsqKmsnK KeilKidgsntvdhKneiK RICH_[N]: NkqpNsgieNflaslNiskeN RICH_[CE]: kaEC RICH_[CK]: KaeCwsqKmsnK RICH_[EH]: HHgEppsEEH RICH_[EK]: KaE RICH_[IN]: NsgIeNflaslNI NtvdhkNeIkqIaNeI RICH_[KY]: Yglpsqp
1420 1440 1460 1480 1500 AA: KQNKKLASYMNKPHSANEYHNVQSMDNMCWPAPSQIPPVSTPVTELSRICSLVGMPQPDFSFLRMPQTMTVCQVKLSNGLLVHGPQCHSENEAKEKAALF STMI: DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD...............................DDDDDDDDDDDDDDDDDDDDDDDDDD DO_IUPRED2A: DDDDDDDDDDDDDDDDDDD.DDDDD....DDDDDD.....D...........................................DDDD....DD...... DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDD.................................................................DDDD.. CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.....D...........................................DDDD....DDDDDD.. CONSENSUS_MOBI: .................................................................................................... RICH_[K]: KqnKKlasymnK RICH_[N]: NkklasymNkphsaNeyhN RICH_[HN]: NkpHsaNeyHN RICH_[KN]: NKKlasymNK RICH_[KY]: KqnKKlasYmnK RICH_[MN]: NeyhNvqsMdNM RICH_[NY]: NkklasYmNkphsaNeYhN
1520 1540 1560 1580 1600 AA: ALQQLGSLGMNFPLPSQVFANYPSAVPPGTIPPAFPPPTGWDHYGSNYALGAANIMPSSSHLFGSMPWGPSVPVPGKPFHHTLYSGTMPMAGGIPGGVHN STMI: DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDD.DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD..DDD DO_IUPRED2A: .............................DDDDDDDD.............................DD........D.DD.DD.DDD..DD...DD..D. DO_SPOTD: .................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS: .................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS_MOBI: .................................................................................................... RICH_[PY]: PPafPPPtgwdhYgsnY RICH_[AY]: AfppptgwdhYgsnYAlgAA RICH_[G]: GtmpmaGGipGG RICH_[P]: PsavPPgtiPPafPPP RICH_[GM]: GtMpMaGGipGG RICH_[HP]: PwgPsvPvPgkPfHH RICH_fLPS_[P]: fanyPsavPPgtiPPafPPP
1620 1640 1660 1680 1700 AA: QFIPLQVTKKRVANKKNFENKEAQSSQATPVQTSQPDSSNIVKVSPRESSSASLKSSPIAQPASSFQVETASQGHSISHHKSTPISSSRRKSRKLAVNFG STMI: DO_DISOPRED3: D...DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_IUPRED2A: D...DDD.DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_SPOTD: DD.....DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS_MOBI: ..................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD RICH_[QS]: SSQatpvQtSQpdSS RICH_[K]: KKrvanKKnfenK RICH_[Q]: QssQatpvQtsQ RICH_[S]: SqpdSSnivkvSpreSSSaSlkSSpiaqpaSS SqghSiShhkStpiSSSrrkS RICH_[HI]: HsIsHHkstpI RICH_[HS]: SqgHSiSHHkStpiSSS RICH_[IS]: SIShhkStpISSS RICH_[KN]: KKrvaNKKNfeNK RICH_fLPS_[S]: SSnivkvSpreSSSaSlkSS RICH_MOBI_[QS]: SSQatpvQtSQpdSS RICH_MOBI_[Q]: QssQatpvQtsQ RICH_MOBI_[S]: SqpdSSnivkvSpreSSSaS SiShhkStpiSSS RICH_MOBI_[SV]: VkVSpreSSS RICH_MOBI_[HI]: HsIsHHkstpI RICH_MOBI_[HS]: SqgHSiSHHkStpiSSS RICH_MOBI_[IS]: IvkvSpreSSSaSlkSSpI SqghSIShhkStpISSSrrkS RICH_fLPS_MOBI_[S]: SSnivkvSpreSSSaSlkSS
AA: VSKPSE STMI: DO_DISOPRED3: DDDDDD DO_IUPRED2A: DDD..D DO_SPOTD: DDDDDD CONSENSUS: DDDDDD CONSENSUS_MOBI: DDDDDD