Q8IZH2 XRN1_HUMAN
Gene name: XRN1
Protein name: 5'-3' exoribonuclease 1
List of terms from Generic GO subset, which this protein is a part of:
- biosynthetic process GO:0009058
- catabolic process GO:0009056
- cellular nitrogen compound metabolic process GO:0034641
- chromosome organization GO:0051276
- DNA metabolic process GO:0006259
- homeostatic process GO:0042592
- nucleobase-containing compound catabolic process GO:0034655
- translation GO:0006412
Table: Top 10 the most similar proteins, based on disordered regions enriched in particular amino acids. Cosine similarity calculation is described here. The whole list can be downloaded at the Download page
| # | UniProt Accession | Gene Name | Cosine Similarity | Generic GO terms |
|---|---|---|---|---|
| 1 | Q7L4E1 | MIGA2 | 0.77977 |
anatomical structure development
GO:0048856 |
| 2 | Q9HBG4 | ATP6V0A4 | 0.75919 |
homeostatic process
GO:0042592 nervous system process GO:0050877 protein transport GO:0015031 ... |
| 3 | O95718 | ESRRB | 0.74342 |
anatomical structure development
GO:0048856 biosynthetic process GO:0009058 carbohydrate metabolic process GO:0005975 ... |
| 4 | O00338 | SULT1C2 | 0.73576 | |
| 5 | O75626 | PRDM1 | 0.72794 |
anatomical structure development
GO:0048856 biosynthetic process GO:0009058 cell differentiation GO:0030154 ... |
| 6 | Q6ZMV9 | KIF6 | 0.72352 | |
| 7 | Q9Y653 | ADGRG1 | 0.71998 |
anatomical structure development
GO:0048856 anatomical structure formation involved in morphogenesis GO:0048646 cell adhesion GO:0007155 ... |
| 8 | Q8WUD1 | RAB2B | 0.69385 |
protein transport
GO:0015031 signal transduction GO:0007165 transport GO:0006810 ... |
| 9 | Q9H040 | SPRTN | 0.69306 |
biosynthetic process
GO:0009058 cellular nitrogen compound metabolic process GO:0034641 cellular protein modification process GO:0006464 ... |
| 10 | Q9BZF3 | OSBPL6 | 0.6741 |
biosynthetic process
GO:0009058 small molecule metabolic process GO:0044281 transport GO:0006810 |
20 40 60 80 100
AA: MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGR
STMI:
DO_DISOPRED3: D...................................................................................................
DO_IUPRED2A: ...............................................................................................DDDDD
DO_SPOTD: ....................................................................................................
CONSENSUS: ....................................................................................................
CONSENSUS_MOBI: ....................................................................................................
120 140 160 180 200
AA: RFRSAKEAEDKIKKAIEKGETLPTEARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRH
STMI:
DO_DISOPRED3: ....................................................................................................
DO_IUPRED2A: DDDDD.......DDDDD.........DD..................................................DDDDDDDDDDDD..........
DO_SPOTD: ....................................................................................................
CONSENSUS: ....................................................................................................
CONSENSUS_MOBI: ....................................................................................................
220 240 260 280 300
AA: CLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQRVCAPEETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHL
STMI:
DO_DISOPRED3: ................................D...DDDDD...........................................................
DO_IUPRED2A: ..................................D.................................................................
DO_SPOTD: ....................................................................................................
CONSENSUS: ....................................................................................................
CONSENSUS_MOBI: ....................................................................................................
320 340 360 380 400
AA: HINHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFESKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSLCWT
STMI:
DO_DISOPRED3: ..............................................................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A: ....................................................................................................
DO_SPOTD: .................................................................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
CONSENSUS: .................................................................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
CONSENSUS_MOBI: ....................................................................................................
RICH_[AE]: EAAgvAAEEArnykE
RICH_[AK]: AAgvAAeeArnyKeKKKlK
RICH_[AY]: YlneAAgvAAeeArnY
RICH_[K]: KeKKKlKgqenslcwt
RICH_[EK]: EaagvaaEEarnyKEKKKlK
RICH_[EY]: YlnEaagvaaEEarnYkE
420 440 460 480 500
AA: ALDKNEGEMITSKDNLEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSDDFLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIHNISTLKI
STMI:
DO_DISOPRED3: DDDDDDDDDDDDDDDDDDD.................................................................................
DO_IUPRED2A: .........DDDDDD.....................................................................................
DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDD............................................................................
CONSENSUS: DDDDDDDDDDDDDDDDDDD.................................................................................
CONSENSUS_MOBI: ....................................................................................................
RICH_[K]: aldK
520 540 560 580 600
AA: HFELGKPFKPFEQLLAVLPAASKNLLPACYQHLMTNEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERKRNQHSECLM
STMI:
DO_DISOPRED3: ....................................................................................................
DO_IUPRED2A: .....................................................................................DD.............
DO_SPOTD: ....................................................................................................
CONSENSUS: ....................................................................................................
CONSENSUS_MOBI: ....................................................................................................
620 640 660 680 700
AA: CWYDRDTEFIYPSPWPEKFPAIERCCTRYKIISLDAWRVDINKNKITRIDQKALYFCGFPTLKHIRHKFFLKKSGVQVFQQSSRGENMMLEILVDAESDE
STMI:
DO_DISOPRED3: .......................................................................................DDDDDDDDDDDD.
DO_IUPRED2A: ....................................................................................................
DO_SPOTD: ....................................................................................................
CONSENSUS: ....................................................................................................
CONSENSUS_MOBI: ....................................................................................................
720 740 760 780 800
AA: LTVENVASSVLGKSVFVNWPHLEEARVVAVSDGETKFYLEEPPGTQKLYSGRTAPPSKVVHLGDKEQSNWAKEVQGISEHYLRRKGIIINETSAVVYAQL
STMI:
DO_DISOPRED3: ........................................D.D.DDD.DDDDDDDD............................................
DO_IUPRED2A: ...............................................DDDD.......DD........................................
DO_SPOTD: ....................................................................................................
CONSENSUS: ................................................DDD.................................................
CONSENSUS_MOBI: ....................................................................................................
820 840 860 880 900
AA: LTGRKYQINQNGEVRLEKQWSKQVVPFVYQTIVKDIRAFDSRFSNIKTLDDLFPLRSMVFMLGTPYYGCTGEVQDSGDVITEGRIRVIFSIPCEPNLDAL
STMI:
DO_DISOPRED3: ....................................................................................................
DO_IUPRED2A: ....................................................................................................
DO_SPOTD: ....................................................................................................
CONSENSUS: ....................................................................................................
CONSENSUS_MOBI: ....................................................................................................
920 940 960 980 1000
AA: IQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSRRNPHGDHKANVGLNLKFNKKNEEVPGYTKKVGSEWMYSSAAEQLLAEYLERAPELFSY
STMI:
DO_DISOPRED3: ....................................................................................................
DO_IUPRED2A: ...............................................D....................................................
DO_SPOTD: ....................................................................................................
CONSENSUS: ....................................................................................................
CONSENSUS_MOBI: ....................................................................................................
1020 1040 1060 1080 1100
AA: IAKNSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEKIEEEVEKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRD
STMI:
DO_DISOPRED3: ....................................................................................................
DO_IUPRED2A: ....................................................................................................
DO_SPOTD: ....................................................................................................
CONSENSUS: ....................................................................................................
CONSENSUS_MOBI: ....................................................................................................
1120 1140 1160 1180 1200
AA: AEFCLFDRVVNVRENFSVPVGLRGTIIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGRGYRLPTSALVNLSHGSRSETGNQKLTAIVKPQPAVHQHSS
STMI:
DO_DISOPRED3: .............................................................................DDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A: ........................................................................DDDDD...DDDDDDDDDDDDD..DDDDD
DO_SPOTD: ...........................................................................DDDDDDDDDDDDDDDDDDDDDDDDD
CONSENSUS: ...........................................................................DDDDDDDDDDDDDDDDDDDDDDDDD
CONSENSUS_MOBI: ....................................................................................................
RICH_[H]: HqHss
RICH_[S]: SS
RICH_[HS]: HqHSS
RICH_fLPS_[S]: qhSS
1220 1240 1260 1280 1300
AA: SSSVSSGHLGALNHSPQSLFVPTQVPTKDDDEFCNIWQSLQGSGKMQYFQPTIQEKGAVLPQEISQVNQHHKSGFNDNSVKYQQRKHDPHRKFKEECKSP
STMI:
DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A: DDDDDDDDD......DDDDDDDDDD.....................DDD.DDDDDD..DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.
DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
CONSENSUS_MOBI: ....................................................................................................
RICH_[H]: sssvssgHlgalnH
RICH_[K]: KyqqrKhdphrKfKeecKsp
RICH_[Q]: QslQgsgkmQyfQptiQ QvnQhhksgfndnsvkyQQ
RICH_[S]: SSSvSSghlgalnhSpqS
RICH_[CE]: EECksp
RICH_[CK]: KhdphrKfKeeCKsp
RICH_[DF]: FvptqvptkDDDeF
RICH_[EK]: KEEcKsp
RICH_[HN]: NqHHksgfNdN
RICH_[HQ]: QeisQvnQHH
RICH_[HS]: SSSvSSgHlgalnHS
RICH_[IQ]: QptIQekgavlpQeI
RICH_fLPS_[S]: SSSvSS
1320 1340 1360 1380 1400
AA: KAECWSQKMSNKQPNSGIENFLASLNISKENEVQSSHHGEPPSEEHLSPQSFAMGTRMLKEILKIDGSNTVDHKNEIKQIANEIPVSSNRRDEYGLPSQP
STMI:
DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD..DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A: ..DDDDDDDDDDD.DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD...DDD..DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
CONSENSUS_MOBI: ....................................................................................................
RICH_[H]: HHgeppseeH
RICH_[I]: IlkIdgsntvdhkneIkqI
RICH_[K]: KaecwsqKmsnK KeilKidgsntvdhKneiK
RICH_[N]: NkqpNsgieNflaslNiskeN
RICH_[CE]: kaEC
RICH_[CK]: KaeCwsqKmsnK
RICH_[EH]: HHgEppsEEH
RICH_[EK]: KaE
RICH_[IN]: NsgIeNflaslNI NtvdhkNeIkqIaNeI
RICH_[KY]: Yglpsqp
1420 1440 1460 1480 1500
AA: KQNKKLASYMNKPHSANEYHNVQSMDNMCWPAPSQIPPVSTPVTELSRICSLVGMPQPDFSFLRMPQTMTVCQVKLSNGLLVHGPQCHSENEAKEKAALF
STMI:
DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD...............................DDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A: DDDDDDDDDDDDDDDDDDD.DDDDD....DDDDDD.....D...........................................DDDD....DD......
DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDD.................................................................DDDD..
CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.....D...........................................DDDD....DDDDDD..
CONSENSUS_MOBI: ....................................................................................................
RICH_[K]: KqnKKlasymnK
RICH_[N]: NkklasymNkphsaNeyhN
RICH_[HN]: NkpHsaNeyHN
RICH_[KN]: NKKlasymNK
RICH_[KY]: KqnKKlasYmnK
RICH_[MN]: NeyhNvqsMdNM
RICH_[NY]: NkklasYmNkphsaNeYhN
1520 1540 1560 1580 1600
AA: ALQQLGSLGMNFPLPSQVFANYPSAVPPGTIPPAFPPPTGWDHYGSNYALGAANIMPSSSHLFGSMPWGPSVPVPGKPFHHTLYSGTMPMAGGIPGGVHN
STMI:
DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDD.DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD..DDD
DO_IUPRED2A: .............................DDDDDDDD.............................DD........D.DD.DD.DDD..DD...DD..D.
DO_SPOTD: .................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
CONSENSUS: .................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
CONSENSUS_MOBI: ....................................................................................................
RICH_[PY]: PPafPPPtgwdhYgsnY
RICH_[AY]: AfppptgwdhYgsnYAlgAA
RICH_[G]: GtmpmaGGipGG
RICH_[P]: PsavPPgtiPPafPPP
RICH_[GM]: GtMpMaGGipGG
RICH_[HP]: PwgPsvPvPgkPfHH
RICH_fLPS_[P]: fanyPsavPPgtiPPafPPP
1620 1640 1660 1680 1700
AA: QFIPLQVTKKRVANKKNFENKEAQSSQATPVQTSQPDSSNIVKVSPRESSSASLKSSPIAQPASSFQVETASQGHSISHHKSTPISSSRRKSRKLAVNFG
STMI:
DO_DISOPRED3: D...DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A: D...DDD.DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD: DD.....DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
CONSENSUS_MOBI: ..................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
RICH_[QS]: SSQatpvQtSQpdSS
RICH_[K]: KKrvanKKnfenK
RICH_[Q]: QssQatpvQtsQ
RICH_[S]: SqpdSSnivkvSpreSSSaSlkSSpiaqpaSS SqghSiShhkStpiSSSrrkS
RICH_[HI]: HsIsHHkstpI
RICH_[HS]: SqgHSiSHHkStpiSSS
RICH_[IS]: SIShhkStpISSS
RICH_[KN]: KKrvaNKKNfeNK
RICH_fLPS_[S]: SSnivkvSpreSSSaSlkSS
RICH_MOBI_[QS]: SSQatpvQtSQpdSS
RICH_MOBI_[Q]: QssQatpvQtsQ
RICH_MOBI_[S]: SqpdSSnivkvSpreSSSaS SiShhkStpiSSS
RICH_MOBI_[SV]: VkVSpreSSS
RICH_MOBI_[HI]: HsIsHHkstpI
RICH_MOBI_[HS]: SqgHSiSHHkStpiSSS
RICH_MOBI_[IS]: IvkvSpreSSSaSlkSSpI SqghSIShhkStpISSSrrkS
RICH_fLPS_MOBI_[S]: SSnivkvSpreSSSaSlkSS
AA: VSKPSE
STMI:
DO_DISOPRED3: DDDDDD
DO_IUPRED2A: DDD..D
DO_SPOTD: DDDDDD
CONSENSUS: DDDDDD
CONSENSUS_MOBI: DDDDDD