Q92541 RTF1_HUMAN
Gene name: RTF1
Protein name: RNA polymerase-associated protein RTF1 homolog
List of terms from Generic GO subset, which this protein is a part of:
- anatomical structure development GO:0048856
- anatomical structure formation involved in morphogenesis GO:0048646
- biosynthetic process GO:0009058
- cell differentiation GO:0030154
- cell-cell signaling GO:0007267
- cellular nitrogen compound metabolic process GO:0034641
- cellular protein modification process GO:0006464
- chromosome organization GO:0051276
- embryo development GO:0009790
- growth GO:0040007
- signal transduction GO:0007165
Table: Top 10 the most similar proteins, based on disordered regions enriched in particular amino acids. Cosine similarity calculation is described here. The whole list can be downloaded at the Download page
| # | UniProt Accession | Gene Name | Cosine Similarity | Generic GO terms |
|---|---|---|---|---|
| 1 | O00203 | AP3B1 | 0.8278 | anatomical structure development GO:0048856 cell adhesion GO:0007155 cell differentiation GO:0030154 ... |
| 2 | P35269 | GTF2F1 | 0.8126 | biological process involved in symbiotic interaction GO:0044403 biosynthetic process GO:0009058 cellular nitrogen compound metabolic process GO:0034641 ... |
| 3 | Q9UIF8 | BAZ2B | 0.7959 | biosynthetic process GO:0009058 cellular nitrogen compound metabolic process GO:0034641 chromosome organization GO:0051276 |
| 4 | Q08945 | SSRP1 | 0.77291 | biological process involved in symbiotic interaction GO:0044403 biosynthetic process GO:0009058 cellular nitrogen compound metabolic process GO:0034641 ... |
| 5 | Q53F19 | NCBP3 | 0.76252 | cellular nitrogen compound metabolic process GO:0034641 immune system process GO:0002376 mRNA processing GO:0006397 ... |
| 6 | Q8WWQ0 | PHIP | 0.76074 | anatomical structure development GO:0048856 biosynthetic process GO:0009058 cell cycle GO:0007049 ... |
| 7 | P46100 | ATRX | 0.75499 | anatomical structure development GO:0048856 biosynthetic process GO:0009058 cell cycle GO:0007049 ... |
| 8 | Q7Z4V5 | HDGFL2 | 0.74557 | growth GO:0040007 |
| 9 | P35659 | DEK | 0.74534 | biological process involved in symbiotic interaction GO:0044403 biosynthetic process GO:0009058 cellular nitrogen compound metabolic process GO:0034641 ... |
| 10 | O75554 | WBP4 | 0.74305 | cellular nitrogen compound metabolic process GO:0034641 mRNA processing GO:0006397 |
20 40 60 80 100 AA: MRGRLCVGRAAAAAAAVAVPLAGGQEGSPGGGRRGSRGTTMVKKRKGRVVIDSDTEDSGSDENLDQELLSLAKRKRSDSEEKEPPVSQPAASSDSETSDS STMI: DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_IUPRED2A: .........D.....DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS_MOBI: ...................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD RICH_[AG]: GrAAAAAAAvAvplAGGqeG RICH_[AV]: VgrAAAAAAAVAV RICH_[A]: AAAAAAAvAvplA RICH_[D]: DsDteDsgsDenlD RICH_[G]: GGqeGspGGGrrGsrGttmvkkrkG RICH_[R]: RRgsRgttmvkkRkgR RICH_[S]: SdSeekeppvSqpaaSSdSetSdS RICH_[DL]: DsDteDsgsDenLDqeLLsL RICH_[DS]: SqpaaSSDSetSDS RICH_[EL]: EnLdqELLsLakrkrsdsEE RICH_[ES]: SdSEEkEppvSqpaaSSdSE RICH_[GR]: GspGGGRRGsRGttmvkkRkGR RICH_MOBI_[D]: DsDteDsgsDenlD RICH_MOBI_[G]: GGqeGspGGGrrGsrGttmvkkrkG RICH_MOBI_[R]: RRgsRgttmvkkRkgR RICH_MOBI_[S]: SqpaaSSdSetSdS RICH_MOBI_[DL]: DsDteDsgsDenLDqeLLsL RICH_MOBI_[DS]: SqpaaSSDSetSDS RICH_MOBI_[EL]: EnLdqELLsLakrkrsdsEE RICH_MOBI_[ES]: SdSEEkEppvSqpaaSSdSE RICH_MOBI_[GR]: GspGGGRRGsRGttmvkkRkGR RICH_fLPS_MOBI_[D]: iDsDteDsgsDenlD RICH_fLPS_MOBI_[G]: plaGGqeGspGGGrrGsrGt
120 140 160 180 200 AA: DDEWTFGSNKNKKKGKARKIEKKGTMKKQANKTASSGSSDKDSSAESSAPEEGEVSDSDSNSSSSSSDSDSSSEDEEFHDGYGEDLMGDEEDRARLEQMT STMI: DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD..DDDDDDDDDD DO_IUPRED2A: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS_MOBI: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD RICH_[AS]: AnktASSgSSdkdSSAeSSA RICH_[D]: DkDssaessapeegevsDsD DsDssseDeefhDgygeDlmgDeeD RICH_[E]: EdEEfhdgygEdlmgdEEdrarlEqmt RICH_[K]: KnKKKgKarKieKKgtmKKqanKtassgssdK RICH_[R]: RaRleqmt RICH_[S]: SSgSSdkdSSaeSSapeegevSdSdSnSSSSSSdSdSSS RICH_[DE]: DkDssaEssapEEgEvsDsD DsDsssEDEEfhDgygEDlmgDEEDrarlE RICH_[DG]: DGyGeDlmGD RICH_[DM]: DlMgDeeDrarleqM RICH_[DS]: DD DkDSSaeSSapeegevSDSDSnSSSSSSDSDSSSeDeefhDgygeD RICH_[ER]: RaRlEqmt RICH_[ES]: SSgSSdkdSSaESSapEEgEvSdSdSnSSSS RICH_[KS]: KKqanKtaSSgSSdKdSS RICH_MOBI_[AS]: AnktASSgSSdkdSSAeSSA RICH_MOBI_[D]: DkDssaessapeegevsDsD DsDssseDeefhDgygeDlmgDeeD RICH_MOBI_[E]: EdEEfhdgygEdlmgdEEdrarlEqmt RICH_MOBI_[K]: KnKKKgKarKieKKgtmKKqanKtassgssdK RICH_MOBI_[R]: RaRleqmt RICH_MOBI_[S]: SSgSSdkdSSaeSS SdSdSnSSSSSSdSdSSS RICH_MOBI_[DE]: DkDssaEssapEEgEvsDsD DsDsssEDEEfhDgygEDlmgDEEDrarlE RICH_MOBI_[DG]: DGyGeDlmGD RICH_MOBI_[DM]: DgygeDlMgDeeDrarleqM RICH_MOBI_[DS]: DD DkDSSaeSSapeegevSDSDSnSSSSSSDSDSSSeDeefhDgygeD RICH_MOBI_[EM]: EdlMgdEEdrarlEqMt RICH_MOBI_[ER]: RaRlEqmt RICH_MOBI_[ES]: SSgSSdkdSSaESSapEEgEvSdSdSnSSSS RICH_MOBI_[KS]: KKqanKtaSSgSSdKdSS RICH_fLPS_MOBI_[S]: aSSgSSdkdSSaeSSapeegevSdSdSnSSSSSSdSdSSS RICH_fLPS_MOBI_[K]: KnKKKgKarKieKKgtmKKqanK
220 240 260 280 300 AA: EKEREQELFNRIEKREVLKRRFEIKKKLKTAKKKEKKEKKKKQEEEQEKKKLTQIQESQVTSHNKERRSKRDEKLDKKSQAMEELKAEREKRKNRTAELL STMI: DO_DISOPRED3: DD.D.....................DD..DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_IUPRED2A: DDDDDDDDDDDDD...............DDD.DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS: DDDDDDDDDDDDD............DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS_MOBI: DDDDDDDDDDDDDD.............DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD RICH_[E]: EkErEqElfnriE EkkEkkkkqEEEqE RICH_[K]: KKlKtaKKKeKKeKKKKqeeeqeKKK KerrsKrdeKldKKsqameelKaereKrK RICH_[Q]: QeeeQekkkltQiQesQ RICH_[R]: ekeReqelfnR RICH_[EK]: KKlKtaKKKEKKEKKKKqEEEqEKKKltqiqE KErrsKrdEKldKKsqamEElKaErEKrK RICH_[EQ]: EkkkkQEEEQEkkkltQiQEsQ RICH_[ER]: EkEREqElfnR RICH_[KQ]: KeKKKKQeeeQeKKKltQiQesQ RICH_[KR]: KeRRsKRdeK KaeReKRKnR RICH_fLPS_[E]: kEkkEkkkkqEEEqE RICH_fLPS_[KE]: KKlKtaKKKEKKEKKKKqEEEqEKKK RICH_fLPS_[K]: KKlKtaKKKeKKeKKKKqeeeqeKKK KldKKsqameelKaereKrK RICH_MOBI_[E]: EkErEqElfnriE EkkEkkkkqEEEqE RICH_MOBI_[K]: KtaKKKeKKeKKKKqeeeqeKKK KerrsKrdeKldKKsqameelKaereKrK RICH_MOBI_[Q]: QeeeQekkkltQiQesQ RICH_MOBI_[R]: ekeReqelfnR RICH_MOBI_[EK]: KtaKKKEKKEKKKKqEEEqEKKKltqiqE KErrsKrdEKldKKsqamEE RICH_MOBI_[EM]: EkErE RICH_MOBI_[EQ]: EkkkkQEEEQEkkkltQiQEsQ RICH_MOBI_[ER]: EkEREqElfnR RICH_MOBI_[KQ]: KeKKKKQeeeQeKKKltQiQesQ RICH_MOBI_[KR]: KeRRsKRdeK KaeReKRKnR
320 340 360 380 400 AA: AKKQPLKTSEVYSDDEEEEEDDKSSEKSDRSSRTSSSDEEEEKEEIPPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVY STMI: DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD................................................ DO_IUPRED2A: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD....................................... DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD................................................ CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD................................................ CONSENSUS_MOBI: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD....................................................... RICH_[D]: DDeeeeeDDksseksD RICH_[E]: EvysddEEEEEddkssE RICH_[S]: SddeeeeeddkSSekSdrSSrtSSS RICH_[DE]: EvysDDEEEEEDDkssEksD RICH_[DS]: SDDeeeeeDDkSSekSDrSSrtS RICH_[ES]: SddEEEEEddkSSEkSdrSSrtSSSdEEEEkEE RICH_fLPS_[SE]: SEvySddEEEEEddkSSEkSdrSSrtSSSdEEEEkEE RICH_fLPS_[S]: kSSekSdrSSrtSSS RICH_fLPS_[D]: sDDeeeeeDD RICH_fLPS_[E]: ktsEvysddEEEEEddkssE ssrtsssdEEEEkEE RICH_fLPS_[ES]: SSEkSdrSSrtSSSdEEEEkEE RICH_fLPS_[ED]: EvysDDEEEEEDD RICH_MOBI_[D]: DDeeeeeDDksseksD RICH_MOBI_[E]: EvysddEEEEEddkssE RICH_MOBI_[S]: SSekSdrSSrtSSS RICH_MOBI_[DE]: EvysDDEEEEEDDkssEksD RICH_MOBI_[DS]: SDDeeeeeDDkSSekSDrSSrtS RICH_MOBI_[ES]: SddEEEEEddkSSEkSdrSSrtSSSdEEEEkEE
420 440 460 480 500 AA: RVAEITGVVETAKVYQLGGTRTNKGLQLRHGNDQRVFRLEFVSNQEFTESEFMKWKEAMFSAGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKE STMI: DO_DISOPRED3: .................................................................................................... DO_IUPRED2A: ...................D.DDDDDDD....................................................................DDD. DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................................
520 540 560 580 600 AA: RFRKAPPNYAMKKTQLLKEKAMAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVAESHNMKNQQMDPFTRRQCK STMI: DO_DISOPRED3: ..............................................................................D..DD..DDDD..DDDDDDDDD DO_IUPRED2A: ..DDDDDDDD..DDDD...DDDDD..DDDDDDDDDDDDDDDDDDDDDDDDD.......D..............DD...DDDDDDDDDDDDDDDDDDDDDD DO_SPOTD: ..................................................................................DDDDDDDDDDDDDDDDDD CONSENSUS: ..............................................................................DDDDDDDDDDDDDDDDDDDDDD CONSENSUS_MOBI: .................................................................................................... RICH_[MQ]: MknQQMdpftrrQ
620 640 660 680 700 AA: PTIVSNSRDPAVQAAILAQLNAKYGSGVLPDAPKEMSKGQGKDKDLNSKSASDLSEDLFKVHDFDVKIDLQVPSSESKALAITSKAPPAKDGAPRRSLNL STMI: DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD........DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD... DO_IUPRED2A: DDDDDD....................DDDDDDDDDDDDDDDDDDDDDDDD.DD.......................DDDDDDDDDDDDDDDDDDDDDDDD DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD...................DDDDDDDDDDDDDDDDDDDDDDD... CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD...................DDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS_MOBI: ..........................DDDDDDDDDDDDDDDDDDDDDDDD.......................DDDDDDDDDDDDDDDDDDDDDDDDDDD RICH_[A]: AvqAAilAqlnA AlAitskAppAkdgA RICH_[K]: KygsgvlpdapKemsKgqgK RICH_[GK]: KyGsGvlpdapKemsKGqGK RICH_MOBI_[A]: AlAitskAppAkdgA RICH_MOBI_[K]: KemsKgqgKdKdlnsK RICH_MOBI_[R]: RRslnl
AA: EDYKKRRGLI STMI: DO_DISOPRED3: DDDD....DD DO_IUPRED2A: D......... DO_SPOTD: ......DDDD CONSENSUS: D.......DD CONSENSUS_MOBI: DDDDDDDDDD RICH_MOBI_[R]: edykkRR