Q92541 RTF1_HUMAN
Gene name: RTF1
Protein name: RNA polymerase-associated protein RTF1 homolog
List of terms from Generic GO subset, which this protein is a part of:
- anatomical structure development GO:0048856
- anatomical structure formation involved in morphogenesis GO:0048646
- biosynthetic process GO:0009058
- cell differentiation GO:0030154
- cell-cell signaling GO:0007267
- cellular nitrogen compound metabolic process GO:0034641
- cellular protein modification process GO:0006464
- chromosome organization GO:0051276
- embryo development GO:0009790
- growth GO:0040007
- signal transduction GO:0007165
Table: Top 10 the most similar proteins, based on disordered regions enriched in particular amino acids. Cosine similarity calculation is described here. The whole list can be downloaded at the Download page
# | UniProt Accession | Gene Name | Cosine Similarity | Generic GO terms |
---|---|---|---|---|
1 | O00203 | AP3B1 | 0.8278 |
anatomical structure development
GO:0048856 cell adhesion GO:0007155 cell differentiation GO:0030154 ... |
2 | P35269 | GTF2F1 | 0.8126 |
biological process involved in symbiotic interaction
GO:0044403 biosynthetic process GO:0009058 cellular nitrogen compound metabolic process GO:0034641 ... |
3 | Q9UIF8 | BAZ2B | 0.7959 |
biosynthetic process
GO:0009058 cellular nitrogen compound metabolic process GO:0034641 chromosome organization GO:0051276 |
4 | Q08945 | SSRP1 | 0.77291 |
biological process involved in symbiotic interaction
GO:0044403 biosynthetic process GO:0009058 cellular nitrogen compound metabolic process GO:0034641 ... |
5 | Q53F19 | NCBP3 | 0.76252 |
cellular nitrogen compound metabolic process
GO:0034641 immune system process GO:0002376 mRNA processing GO:0006397 ... |
6 | Q8WWQ0 | PHIP | 0.76074 |
anatomical structure development
GO:0048856 biosynthetic process GO:0009058 cell cycle GO:0007049 ... |
7 | P46100 | ATRX | 0.75499 |
anatomical structure development
GO:0048856 biosynthetic process GO:0009058 cell cycle GO:0007049 ... |
8 | Q7Z4V5 | HDGFL2 | 0.74557 |
growth
GO:0040007 |
9 | P35659 | DEK | 0.74534 |
biological process involved in symbiotic interaction
GO:0044403 biosynthetic process GO:0009058 cellular nitrogen compound metabolic process GO:0034641 ... |
10 | O75554 | WBP4 | 0.74305 |
cellular nitrogen compound metabolic process
GO:0034641 mRNA processing GO:0006397 |
20 40 60 80 100
AA: MRGRLCVGRAAAAAAAVAVPLAGGQEGSPGGGRRGSRGTTMVKKRKGRVVIDSDTEDSGSDENLDQELLSLAKRKRSDSEEKEPPVSQPAASSDSETSDS
STMI:
DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A: .........D.....DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
CONSENSUS_MOBI: ...................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
RICH_[AG]: GrAAAAAAAvAvplAGGqeG
RICH_[AV]: VgrAAAAAAAVAV
RICH_[A]: AAAAAAAvAvplA
RICH_[D]: DsDteDsgsDenlD
RICH_[G]: GGqeGspGGGrrGsrGttmvkkrkG
RICH_[R]: RRgsRgttmvkkRkgR
RICH_[S]: SdSeekeppvSqpaaSSdSetSdS
RICH_[DL]: DsDteDsgsDenLDqeLLsL
RICH_[DS]: SqpaaSSDSetSDS
RICH_[EL]: EnLdqELLsLakrkrsdsEE
RICH_[ES]: SdSEEkEppvSqpaaSSdSE
RICH_[GR]: GspGGGRRGsRGttmvkkRkGR
RICH_MOBI_[D]: DsDteDsgsDenlD
RICH_MOBI_[G]: GGqeGspGGGrrGsrGttmvkkrkG
RICH_MOBI_[R]: RRgsRgttmvkkRkgR
RICH_MOBI_[S]: SqpaaSSdSetSdS
RICH_MOBI_[DL]: DsDteDsgsDenLDqeLLsL
RICH_MOBI_[DS]: SqpaaSSDSetSDS
RICH_MOBI_[EL]: EnLdqELLsLakrkrsdsEE
RICH_MOBI_[ES]: SdSEEkEppvSqpaaSSdSE
RICH_MOBI_[GR]: GspGGGRRGsRGttmvkkRkGR
RICH_fLPS_MOBI_[D]: iDsDteDsgsDenlD
RICH_fLPS_MOBI_[G]: plaGGqeGspGGGrrGsrGt
120 140 160 180 200
AA: DDEWTFGSNKNKKKGKARKIEKKGTMKKQANKTASSGSSDKDSSAESSAPEEGEVSDSDSNSSSSSSDSDSSSEDEEFHDGYGEDLMGDEEDRARLEQMT
STMI:
DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD..DDDDDDDDDD
DO_IUPRED2A: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
CONSENSUS_MOBI: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
RICH_[AS]: AnktASSgSSdkdSSAeSSA
RICH_[D]: DkDssaessapeegevsDsD DsDssseDeefhDgygeDlmgDeeD
RICH_[E]: EdEEfhdgygEdlmgdEEdrarlEqmt
RICH_[K]: KnKKKgKarKieKKgtmKKqanKtassgssdK
RICH_[R]: RaRleqmt
RICH_[S]: SSgSSdkdSSaeSSapeegevSdSdSnSSSSSSdSdSSS
RICH_[DE]: DkDssaEssapEEgEvsDsD DsDsssEDEEfhDgygEDlmgDEEDrarlE
RICH_[DG]: DGyGeDlmGD
RICH_[DM]: DlMgDeeDrarleqM
RICH_[DS]: DD DkDSSaeSSapeegevSDSDSnSSSSSSDSDSSSeDeefhDgygeD
RICH_[ER]: RaRlEqmt
RICH_[ES]: SSgSSdkdSSaESSapEEgEvSdSdSnSSSS
RICH_[KS]: KKqanKtaSSgSSdKdSS
RICH_MOBI_[AS]: AnktASSgSSdkdSSAeSSA
RICH_MOBI_[D]: DkDssaessapeegevsDsD DsDssseDeefhDgygeDlmgDeeD
RICH_MOBI_[E]: EdEEfhdgygEdlmgdEEdrarlEqmt
RICH_MOBI_[K]: KnKKKgKarKieKKgtmKKqanKtassgssdK
RICH_MOBI_[R]: RaRleqmt
RICH_MOBI_[S]: SSgSSdkdSSaeSS SdSdSnSSSSSSdSdSSS
RICH_MOBI_[DE]: DkDssaEssapEEgEvsDsD DsDsssEDEEfhDgygEDlmgDEEDrarlE
RICH_MOBI_[DG]: DGyGeDlmGD
RICH_MOBI_[DM]: DgygeDlMgDeeDrarleqM
RICH_MOBI_[DS]: DD DkDSSaeSSapeegevSDSDSnSSSSSSDSDSSSeDeefhDgygeD
RICH_MOBI_[EM]: EdlMgdEEdrarlEqMt
RICH_MOBI_[ER]: RaRlEqmt
RICH_MOBI_[ES]: SSgSSdkdSSaESSapEEgEvSdSdSnSSSS
RICH_MOBI_[KS]: KKqanKtaSSgSSdKdSS
RICH_fLPS_MOBI_[S]: aSSgSSdkdSSaeSSapeegevSdSdSnSSSSSSdSdSSS
RICH_fLPS_MOBI_[K]: KnKKKgKarKieKKgtmKKqanK
220 240 260 280 300
AA: EKEREQELFNRIEKREVLKRRFEIKKKLKTAKKKEKKEKKKKQEEEQEKKKLTQIQESQVTSHNKERRSKRDEKLDKKSQAMEELKAEREKRKNRTAELL
STMI:
DO_DISOPRED3: DD.D.....................DD..DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A: DDDDDDDDDDDDD...............DDD.DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
CONSENSUS: DDDDDDDDDDDDD............DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
CONSENSUS_MOBI: DDDDDDDDDDDDDD.............DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
RICH_[E]: EkErEqElfnriE EkkEkkkkqEEEqE
RICH_[K]: KKlKtaKKKeKKeKKKKqeeeqeKKK KerrsKrdeKldKKsqameelKaereKrK
RICH_[Q]: QeeeQekkkltQiQesQ
RICH_[R]: ekeReqelfnR
RICH_[EK]: KKlKtaKKKEKKEKKKKqEEEqEKKKltqiqE KErrsKrdEKldKKsqamEElKaErEKrK
RICH_[EQ]: EkkkkQEEEQEkkkltQiQEsQ
RICH_[ER]: EkEREqElfnR
RICH_[KQ]: KeKKKKQeeeQeKKKltQiQesQ
RICH_[KR]: KeRRsKRdeK KaeReKRKnR
RICH_fLPS_[E]: kEkkEkkkkqEEEqE
RICH_fLPS_[KE]: KKlKtaKKKEKKEKKKKqEEEqEKKK
RICH_fLPS_[K]: KKlKtaKKKeKKeKKKKqeeeqeKKK KldKKsqameelKaereKrK
RICH_MOBI_[E]: EkErEqElfnriE EkkEkkkkqEEEqE
RICH_MOBI_[K]: KtaKKKeKKeKKKKqeeeqeKKK KerrsKrdeKldKKsqameelKaereKrK
RICH_MOBI_[Q]: QeeeQekkkltQiQesQ
RICH_MOBI_[R]: ekeReqelfnR
RICH_MOBI_[EK]: KtaKKKEKKEKKKKqEEEqEKKKltqiqE KErrsKrdEKldKKsqamEE
RICH_MOBI_[EM]: EkErE
RICH_MOBI_[EQ]: EkkkkQEEEQEkkkltQiQEsQ
RICH_MOBI_[ER]: EkEREqElfnR
RICH_MOBI_[KQ]: KeKKKKQeeeQeKKKltQiQesQ
RICH_MOBI_[KR]: KeRRsKRdeK KaeReKRKnR
320 340 360 380 400
AA: AKKQPLKTSEVYSDDEEEEEDDKSSEKSDRSSRTSSSDEEEEKEEIPPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVY
STMI:
DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD................................................
DO_IUPRED2A: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.......................................
DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD................................................
CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD................................................
CONSENSUS_MOBI: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.......................................................
RICH_[D]: DDeeeeeDDksseksD
RICH_[E]: EvysddEEEEEddkssE
RICH_[S]: SddeeeeeddkSSekSdrSSrtSSS
RICH_[DE]: EvysDDEEEEEDDkssEksD
RICH_[DS]: SDDeeeeeDDkSSekSDrSSrtS
RICH_[ES]: SddEEEEEddkSSEkSdrSSrtSSSdEEEEkEE
RICH_fLPS_[SE]: SEvySddEEEEEddkSSEkSdrSSrtSSSdEEEEkEE
RICH_fLPS_[S]: kSSekSdrSSrtSSS
RICH_fLPS_[D]: sDDeeeeeDD
RICH_fLPS_[E]: ktsEvysddEEEEEddkssE ssrtsssdEEEEkEE
RICH_fLPS_[ES]: SSEkSdrSSrtSSSdEEEEkEE
RICH_fLPS_[ED]: EvysDDEEEEEDD
RICH_MOBI_[D]: DDeeeeeDDksseksD
RICH_MOBI_[E]: EvysddEEEEEddkssE
RICH_MOBI_[S]: SSekSdrSSrtSSS
RICH_MOBI_[DE]: EvysDDEEEEEDDkssEksD
RICH_MOBI_[DS]: SDDeeeeeDDkSSekSDrSSrtS
RICH_MOBI_[ES]: SddEEEEEddkSSEkSdrSSrtSSSdEEEEkEE
420 440 460 480 500
AA: RVAEITGVVETAKVYQLGGTRTNKGLQLRHGNDQRVFRLEFVSNQEFTESEFMKWKEAMFSAGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKE
STMI:
DO_DISOPRED3: ....................................................................................................
DO_IUPRED2A: ...................D.DDDDDDD....................................................................DDD.
DO_SPOTD: ....................................................................................................
CONSENSUS: ....................................................................................................
CONSENSUS_MOBI: ....................................................................................................
520 540 560 580 600
AA: RFRKAPPNYAMKKTQLLKEKAMAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVAESHNMKNQQMDPFTRRQCK
STMI:
DO_DISOPRED3: ..............................................................................D..DD..DDDD..DDDDDDDDD
DO_IUPRED2A: ..DDDDDDDD..DDDD...DDDDD..DDDDDDDDDDDDDDDDDDDDDDDDD.......D..............DD...DDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD: ..................................................................................DDDDDDDDDDDDDDDDDD
CONSENSUS: ..............................................................................DDDDDDDDDDDDDDDDDDDDDD
CONSENSUS_MOBI: ....................................................................................................
RICH_[MQ]: MknQQMdpftrrQ
620 640 660 680 700
AA: PTIVSNSRDPAVQAAILAQLNAKYGSGVLPDAPKEMSKGQGKDKDLNSKSASDLSEDLFKVHDFDVKIDLQVPSSESKALAITSKAPPAKDGAPRRSLNL
STMI:
DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD........DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD...
DO_IUPRED2A: DDDDDD....................DDDDDDDDDDDDDDDDDDDDDDDD.DD.......................DDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD...................DDDDDDDDDDDDDDDDDDDDDDD...
CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD...................DDDDDDDDDDDDDDDDDDDDDDDDDD
CONSENSUS_MOBI: ..........................DDDDDDDDDDDDDDDDDDDDDDDD.......................DDDDDDDDDDDDDDDDDDDDDDDDDDD
RICH_[A]: AvqAAilAqlnA AlAitskAppAkdgA
RICH_[K]: KygsgvlpdapKemsKgqgK
RICH_[GK]: KyGsGvlpdapKemsKGqGK
RICH_MOBI_[A]: AlAitskAppAkdgA
RICH_MOBI_[K]: KemsKgqgKdKdlnsK
RICH_MOBI_[R]: RRslnl
AA: EDYKKRRGLI
STMI:
DO_DISOPRED3: DDDD....DD
DO_IUPRED2A: D.........
DO_SPOTD: ......DDDD
CONSENSUS: D.......DD
CONSENSUS_MOBI: DDDDDDDDDD
RICH_MOBI_[R]: edykkRR