Q9BZI7 REN3B_HUMAN
Gene name: UPF3B
Protein name: Regulator of nonsense transcripts 3B
List of terms from Generic GO subset, which this protein is a part of:
- biosynthetic process GO:0009058
- catabolic process GO:0009056
- cellular nitrogen compound metabolic process GO:0034641
- mRNA processing GO:0006397
- nucleobase-containing compound catabolic process GO:0034655
- nucleocytoplasmic transport GO:0006913
- protein transport GO:0015031
- translation GO:0006412
- transport GO:0006810
Table: Top 10 the most similar proteins, based on disordered regions enriched in particular amino acids. Cosine similarity calculation is described here. The whole list can be downloaded at the Download page
| # | UniProt Accession | Gene Name | Cosine Similarity | Generic GO terms |
|---|---|---|---|---|
| 1 | Q8WVS4 | DYNC2I1 | 0.82914 | anatomical structure development GO:0048856 cellular component assembly GO:0022607 cytoskeleton-dependent intracellular transport GO:0030705 ... |
| 2 | P26358 | DNMT1 | 0.82586 | anatomical structure development GO:0048856 biosynthetic process GO:0009058 cell death GO:0008219 ... |
| 3 | Q9UIG0 | BAZ1B | 0.82436 | biosynthetic process GO:0009058 cellular nitrogen compound metabolic process GO:0034641 cellular protein modification process GO:0006464 ... |
| 4 | O14617 | AP3D1 | 0.82007 | anatomical structure development GO:0048856 cell adhesion GO:0007155 cell differentiation GO:0030154 ... |
| 5 | Q8NI27 | THOC2 | 0.8113 | anatomical structure development GO:0048856 biological process involved in symbiotic interaction GO:0044403 cell differentiation GO:0030154 ... |
| 6 | Q13123 | IK | 0.81125 | biological process involved in symbiotic interaction GO:0044403 cell cycle GO:0007049 cellular nitrogen compound metabolic process GO:0034641 ... |
| 7 | Q9NPI7 | KRCC1 | 0.80974 | |
| 8 | O60841 | EIF5B | 0.80927 | biosynthetic process GO:0009058 cellular nitrogen compound metabolic process GO:0034641 translation GO:0006412 |
| 9 | Q8NHQ9 | DDX55 | 0.80589 | |
| 10 | Q9NX58 | LYAR | 0.80552 | anatomical structure development GO:0048856 biosynthetic process GO:0009058 cell differentiation GO:0030154 ... |
20 40 60 80 100 AA: MKEEKEHRPKEKRVTLLTPAGATGSGGGTSGDSSKGEDKQDRNKEKKEALSKVVIRRLPPTLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYIN STMI: DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.................................................... DO_IUPRED2A: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD..........DDDDDDDDDD......D...................... DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.................................................... CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.................................................... CONSENSUS_MOBI: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD................................................... RICH_[G]: GatGsGGGtsGdsskG RICH_[K]: KeeKehrpKeK KgedKqdrnKeKK RICH_[T]: TllTpagaTgsgggT RICH_[EK]: KEEKEhrpKEK RICH_[GK]: GGtsGdssKGedKqdrnKeK RICH_[GS]: SGGGtSGdSS RICH_[GT]: TllTpaGaTGsGGGTsG RICH_fLPS_[G]: ltpaGatGsGGGtsGdsskG RICH_MOBI_[G]: GatGsGGGtsGdsskG RICH_MOBI_[K]: KeeKehrpKeK KgedKqdrnKeKK RICH_MOBI_[T]: TllTpagaTgsgggT RICH_MOBI_[EK]: KEEKEhrpKEK RICH_MOBI_[GK]: GGtsGdssKGedKqdrnKeK RICH_MOBI_[GS]: SGGGtSGdSS RICH_MOBI_[GT]: TllTpaGaTGsGGGTsG
120 140 160 180 200 AA: FKNQEDIILFRDRFDGYVFLDNKGQEYPAIVEFAPFQKAAKKKTKKRDTKVGTIDDDPEYRKFLESYATDNEKMTSTPETLLEEIEAKNRELIAKKTTPL STMI: DO_DISOPRED3: ...............................................DDDDD........................DDDDDDDDD............... DO_IUPRED2A: .........................................DDDDDDDDDDDD...........DDDDDDD..DDDDDDDDD.................. DO_SPOTD: ........................................DDDDDDDDDDDDD..DDD...........DDDDDDDDDDDDDDDDDDDDDDDDDDDDDD. CONSENSUS: .........................................DDDDDDDDDDDD................DDDDDDDDDDDDDDDD............... CONSENSUS_MOBI: .................................................................................................... RICH_[ET]: TsTpETllEE RICH_[KT]: TKKrdTKvgT
220 240 260 280 300 AA: LSFLKNKQRMREEKREERRRREIERKRQREEERRKWKEEEKRKRKDIEKLKKIDRIPERDKLKDEPKIKVHRFLLQAVNQKNLLKKPEKGDEKELDKREK STMI: DO_DISOPRED3: .........DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_IUPRED2A: ...DDDDDD.DDDDDDDDDDDDDDDDDDDDDDDDDDDDD.......DDDDD..DDDDDDDDDDD.DD.DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_SPOTD: ........DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS: ........DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS_MOBI: .....DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD RICH_[D]: DieklkkiDriperDklkD RICH_[E]: EEkrEErrrrEiErkrqrEEErrkwkEEE RICH_[I]: IeklkkIdrI RICH_[K]: KrqreeerrKwKeeeKrKrKdieKlKKidriperdKlKdepKiKvhrfllqavnqKnllKKpeKgdeKeldKreK RICH_[R]: RmReekReeRRRReieRkRqReeeRRkwkeeekRkR RICH_[DI]: DIeklkkIDrIperD RICH_[DK]: KDieKlKKiDriperDKlKD DeKelDKreK RICH_[EK]: EiErKrqrEEErrKwKEEEKrKrKdiEKlKKidripE KnllKKpEKgdEKEldKrEK RICH_[ER]: RmREEkREERRRREiERkRqREEERRkwkEEEkRkRkdiE RICH_[IK]: KrKrKdIeKlKKIdrI RICH_[KL]: KiKvhrfLLqavnqKnLLKKpeKgdeK RICH_[KR]: RKRqReeeRRKwKeeeKRKRKdieKlKK RICH_[LN]: LLqavNqkNLL RICH_MOBI_[D]: DieklkkiDriperDklkD RICH_MOBI_[E]: EEkrEErrrrEiErkrqrEEErrkwkEEE RICH_MOBI_[I]: IeklkkIdrI RICH_MOBI_[K]: KrqreeerrKwKeeeKrKrKdieKlKKidriperdKlKdepKiKvhrfllqavnqKnllKKpeKgdeKeldKreK RICH_MOBI_[L]: LLqavnqknLL RICH_MOBI_[R]: RmReekReeRRRReieRkRqReeeRRkwkeeekRkR RICH_MOBI_[DI]: DIeklkkIDrIperDklkD RICH_MOBI_[DK]: KDieKlKKiDriperDKlKD DeKelDKreK RICH_MOBI_[EI]: EEEkrkrkdIEklkkIdrIpE RICH_MOBI_[EK]: EiErKrqrEEErrKwKEEEKrKrKdiEKlKKidripE KnllKKpEKgdEKEldKrEK RICH_MOBI_[ER]: RmREEkREERRRREiERkRqREEERRkwkEEEkRkRkdiE RICH_MOBI_[IK]: KwKeeeKrKrKdIeKlKKIdrIperdKlKdepKIK RICH_MOBI_[IR]: RkRkdIeklkkIdRIpeR RICH_MOBI_[KL]: KiKvhrfLLqavnqKnLLKKpeKgdeKeL RICH_MOBI_[KR]: RKRqReeeRRKwKeeeKRKRKdieKlKK RICH_MOBI_[LN]: LLqavNqkNLL RICH_fLPS_MOBI_[R]: RmReekReeRRRReieRkRqReeeRR RICH_fLPS_MOBI_[RE]: RmREEkREERRRREiERkRqREEERRkwkEEEkRkR RICH_fLPS_MOBI_[E]: EEkrEErrrrEiErkrqrEEErrkwkEEE RICH_fLPS_MOBI_[K]: KwKeeeKrKrKdieKlKKidriperdKlKdepKiK KnllKKpeKgdeKeldKreK
320 340 360 380 400 AA: AKKLDKENLSDERASGQSCTLPKRSDSELKDEKPKRPEDESGRDYREREREYERDQERILRERERLKRQEEERRRQKERYEKEKTFKRKEEEMKKEKDTL STMI: DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_IUPRED2A: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS_MOBI: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD RICH_[D]: DselkDekpkrpeDesgrD RICH_[E]: EkpkrpEdEsgrdyrErErEyErdqErilrErErlkrqEEE EryEkEktfkrkEEEmkkE RICH_[RY]: RpedesgRdYReReReYeRdqeRilReR RICH_[K]: aKKldK KrsdselKdeKpK KrqeeerrrqKeryeKeKtfKrKeeemKKeKdtl RICH_[R]: RpedesgRdyReReReyeRdqeRilReReRlkRqeeeRRRqkeRyekektfkR RICH_[DE]: DsElkDEkpkrpEDEsgrD RICH_[DK]: aKKlD RICH_[EK]: aKKldKEnlsdE KrsdsElKdEKpKrpEdE KrqEEErrrqKEryEKEKtfKrKEEEmKKEKdtl RICH_[ER]: EkpkRpEdEsgRdyREREREyERdqERilRERERlkRqEEERRRqkERyEkEktfkRkEEE RICH_[EY]: EdEsgrdYrErErEYErdqErilrErE RICH_[KR]: RlKRqeeeRRRqKeRyeKeKtfKRK RICH_MOBI_[D]: DselkDekpkrpeDesgrD RICH_MOBI_[E]: EkpkrpEdEsgrdyrErErEyErdqErilrErErlkrqEEE EryEkEktfkrkEEEmkkE RICH_MOBI_[RY]: RpedesgRdYReReReYeRdqeRilReR RICH_MOBI_[K]: aKKldK KrsdselKdeKpK KrqeeerrrqKeryeKeKtfKrKeeemKKeKdtl RICH_MOBI_[R]: RpedesgRdyReReReyeRdqeRilReReRlkRqeeeRRRqkeRyekektfkR RICH_MOBI_[DE]: DsElkDEkpkrpEDEsgrD RICH_MOBI_[DK]: aKKlD RICH_MOBI_[EK]: aKKldKEnlsdE KrsdsElKdEKpKrpEdE KrqEEErrrqKEryEKEKtfKrKEEEmKKEKdtl RICH_MOBI_[ER]: EkpkRpEdEsgRdyREREREyERdqERilRERERlkRqEEERRRqkERyEkEktfkRkEEE RICH_MOBI_[EY]: EdEsgrdYrErErEYErdqErilrErE RICH_MOBI_[KR]: RlKRqeeeRRRqKeRyeKeKtfKRK RICH_fLPS_MOBI_[R]: RdyReReReyeRdqeRilReReRlkRqeeeRRRqkeR RICH_fLPS_MOBI_[RK]: RdyReReReyeRdqeRilReReRlKRqeeeRRRqKeRyeKeKtfKRKeeemKKeKdtl RICH_fLPS_MOBI_[K]: aKKldK KeryeKeKtfKrKeeemKKeKdtl
420 440 460 480 AA: RDKGKKAESTESIGSSEKTEKKEEVVKRDRIRNKDRPAMQLYQPGARSRNRLCPPDDSTKSGDSAAERKQESGISHRKEGGEE STMI: DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.DDDD...DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_IUPRED2A: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS_MOBI: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.................DDDDDDDDDDDDDDDDDD...DDDDDDDDDDDDDDD RICH_[PR]: RPamqlyqPgaRsRnRlcPP RICH_[E]: EstEsigssEktEkkEE RICH_[K]: rdKgKK KteKKeevvKrdrirnK RICH_[R]: RdRiRnkdRpamqlyqpgaRsRnR RICH_[EK]: rdKgKKaEstE EKtEKKEEvvKrdrirnK RICH_[ER]: EktEkkEEvvkRdRiRnkdR RICH_[ES]: EStESigSSE RICH_[KR]: KteKKeevvKRdRiRnKdR RICH_MOBI_[E]: EstEsigssEktEkkEE RICH_MOBI_[K]: rdKgKK KteKKeevvK RICH_MOBI_[EK]: rdKgKKaEstE RICH_MOBI_[EV]: EktEkkEEVV RICH_MOBI_[KV]: KteKKeeVVK RICH_fLPS_MOBI_[RK]: RdKgKK RICH_fLPS_MOBI_[K]: rdKgKK