Q9H0D6 XRN2_HUMAN
Gene name: XRN2
Protein name: 5'-3' exoribonuclease 2
List of terms from Generic GO subset, which this protein is a part of:
- anatomical structure development GO:0048856
- biosynthetic process GO:0009058
- catabolic process GO:0009056
- cell differentiation GO:0030154
- cellular nitrogen compound metabolic process GO:0034641
- DNA metabolic process GO:0006259
- mRNA processing GO:0006397
- nucleobase-containing compound catabolic process GO:0034655
- reproduction GO:0000003
- ribosome biogenesis GO:0042254
Table: Top 10 the most similar proteins, based on disordered regions enriched in particular amino acids. Cosine similarity calculation is described here. The whole list can be downloaded at the Download page
| # | UniProt Accession | Gene Name | Cosine Similarity | Generic GO terms |
|---|---|---|---|---|
| 1 | Q9BUJ2 | HNRNPUL1 | 0.60414 | cellular nitrogen compound metabolic process GO:0034641 mRNA processing GO:0006397 |
| 2 | Q8N7X1 | RBMXL3 | 0.60308 | cellular nitrogen compound metabolic process GO:0034641 mRNA processing GO:0006397 |
| 3 | O75526 | RBMXL2 | 0.60031 | cellular nitrogen compound metabolic process GO:0034641 mRNA processing GO:0006397 |
| 4 | Q8NG27 | PJA1 | 0.58186 | catabolic process GO:0009056 cellular protein modification process GO:0006464 |
| 5 | P38159 | RBMX | 0.581 | biosynthetic process GO:0009058 cell differentiation GO:0030154 cellular component assembly GO:0022607 ... |
| 6 | Q15415 | RBMY1F | 0.57214 | cellular nitrogen compound metabolic process GO:0034641 mRNA processing GO:0006397 reproduction GO:0000003 |
| 7 | Q96T37 | RBM15 | 0.56655 | anatomical structure development GO:0048856 anatomical structure formation involved in morphogenesis GO:0048646 biological process involved in symbiotic interaction GO:0044403 ... |
| 8 | Q86US8 | SMG6 | 0.5629 | biosynthetic process GO:0009058 catabolic process GO:0009056 cellular nitrogen compound metabolic process GO:0034641 ... |
| 9 | P0DJD4 | RBMY1C | 0.56167 | cellular nitrogen compound metabolic process GO:0034641 mRNA processing GO:0006397 |
| 10 | Q8TDD1 | DDX54 | 0.56146 | cellular nitrogen compound metabolic process GO:0034641 ribosome biogenesis GO:0042254 signal transduction GO:0007165 |
20 40 60 80 100 AA: MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYM STMI: DO_DISOPRED3: ..........................DDDDDDDDDD................................................................ DO_IUPRED2A: ...............................DDDDDD..D......................DDDDDDDDD.D........................... DO_SPOTD: .................................................................................................... CONSENSUS: ...............................DDDDD................................................................ CONSENSUS_MOBI: ....................................................................................................
120 140 160 180 200 AA: AIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDASA STMI: DO_DISOPRED3: ............DDDDDDDDD.........................DDD................................................... DO_IUPRED2A: ............DDDDDDDDDDDDDDDD.D...................................................................... DO_SPOTD: .................................................................................................... CONSENSUS: ............DDDDDDDDD............................................................................... CONSENSUS_MOBI: ....................................................................................................
220 240 260 280 300 AA: PGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGE STMI: DO_DISOPRED3: ...............................................................DDDDDDDDDD...DDDD.D.................. DO_IUPRED2A: .....DDDDDDDDDDDDD....DDD..........................D...........................D.........D.......... DO_SPOTD: ...........................................................................DDDDDDDDDDDDDDDDDD....... CONSENSUS: ............................................................................DDDDDD.......D.......... CONSENSUS_MOBI: ....................................................................................................
320 340 360 380 400 AA: FIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENAIDRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVE STMI: DO_DISOPRED3: .................................................................................................... DO_IUPRED2A: .................................................................................................... DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................................
420 440 460 480 500 AA: DSIFKKRKDDEDSFRRRQKEKRKRMKRDQPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYEMRMQNNSSPSISPNTSFTSDGSPSPLGGIKRKAEDSD STMI: DO_DISOPRED3: ....DDD...DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD..DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_IUPRED2A: ......DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_SPOTD: ..............DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS: ......D...DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS_MOBI: .......DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD RICH_[PS]: SSPSiSPntSftSdgSPSP RICH_[E]: Edsd RICH_[N]: NNsspsispN RICH_[R]: RRRqkekRkRmkR RICH_[S]: SSpSiSpntSftSdgSpS RICH_[DE]: DsD RICH_[KR]: RRRqKeKRKRmKR RICH_[MN]: NprqaayeMrMqNN RICH_[NS]: NNSSpSiSpNtSftS RICH_fLPS_[R]: edsfRRRqkekRkRmkRdqp RICH_MOBI_[D]: DDeDsfrrrqkekrkrmkrD RICH_MOBI_[E]: Edsd RICH_MOBI_[K]: KddedsfrrrqKeKrKrmK RICH_MOBI_[N]: NprqaayemrmqNNsspsispN RICH_MOBI_[R]: RRRqkekRkRmkR RICH_MOBI_[S]: SSpSiSpntSftSdgSpS RICH_MOBI_[DK]: DDeDsfrrrqKeKrKrmKrD RICH_MOBI_[DR]: DDeDsfRRRqkekRkRmkRD RICH_MOBI_[FK]: FrrrqKeKrKrmKrdqpaF RICH_MOBI_[FR]: FRRRqkekRkRmkRdqpaF RICH_MOBI_[IS]: SISpntSftSdgSpSplggI RICH_MOBI_[KR]: KddedsfRRRqKeKRKRmKR RICH_MOBI_[MN]: NprqaayeMrMqNN RICH_MOBI_[MS]: MrMqnnSSpSiSpntSftS RICH_MOBI_[NS]: NNSSpSiSpNtSftS
520 540 560 580 600 AA: SEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMG STMI: DO_DISOPRED3: DDDDDDDD............................................................................................ DO_IUPRED2A: DDDDDDDDD........................................................................................... DO_SPOTD: DDDDDDDD............................................................................................ CONSENSUS: DDDDDDDD............................................................................................ CONSENSUS_MOBI: DDDDDDDD............................................................................................ RICH_[E]: sEpEpE RICH_[DE]: sEpEpED RICH_MOBI_[E]: sEpEpE
620 640 660 680 700 AA: VFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSLGGDVLFVGKHHPLHDFILELY STMI: DO_DISOPRED3: .................................................................................................... DO_IUPRED2A: ......................................................................DDD........................... DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................................
720 740 760 780 800 AA: QTGSTEPVEVPPELCHGIQGKFSLDEEAILPDQIVCSPVPMLRDLTQNTVVSINFKDPQFAEDYIFKAVMLPGARKPAAVLKPSDWEKSSNGRQWKPQLG STMI: DO_DISOPRED3: .............................................................................................DDDDDDD DO_IUPRED2A: ..........D.....................................................................DDDDDDDD.D.DDDDDDDDD DO_SPOTD: .......................................................................................DDDDDDD...DDD CONSENSUS: .......................................................................................D.DDDDDDDDDDD CONSENSUS_MOBI: ....................................................................................................
820 840 860 880 900 AA: FNRDRRPVHLDQAAFRTLGHVMPRGSGTGIYSNAAPPPVTYQGNLYRPLLRGQAQIPKLMSNMRPQDSWRGPPPLFQQQRFDRGVGAEPLLPWNRMLQTQ STMI: DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_IUPRED2A: DDD...............D......DDDDDDDDDD......DDDD..........DDDDDDDDDDDDDDDDDDDDDDDDDDD....DD..DDD..DDD.. DO_SPOTD: DDDDDDD.............................................DD....DDDDDDDDDDD.DDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS: DDDDDDD...........D......DDDDDDDDDD......DDDD.......DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS_MOBI: .................................................................................................... RICH_[PQ]: PQdswrgPPPlfQQQ RICH_[PR]: RPqdswRgPPPlfqqqRfdR RICH_[QR]: RpQdswRgppplfQQQRfdR RICH_[QY]: Q RICH_[Q]: QdswrgppplfQQQ QtQ RICH_[R]: RpqdswRgppplfqqqRfdR RICH_[MQ]: QaQipklMsnMrpQ RICH_[NQ]: NrmlQtQ
920 940 AA: NAAFQPNQYQMLAGPGGYPPRRDDRGGRQGYPREGRKYPLPPPSGRYNWN STMI: DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_IUPRED2A: DD.DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS_MOBI: ..........DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD RICH_[PR]: PggyPPRRddRggRqgyPR RICH_[PY]: PnqYqmlagPggYPP YPregrkYPlPPPsgrY RICH_[QY]: naafQpnQYQmlagpggY RICH_[G]: GpGGypprrddrGGrqGypreG RICH_[RY]: YqmlagpggYppRRddRggR RICH_[Q]: naafQpnQyQ RICH_[R]: RRddRggRqgypRegR RICH_[Y]: YqmlagpggY RICH_[GP]: GPGGyPPrrddrGGrqGyP RICH_[GR]: GpGGyppRRddRGGRqGypReGR RICH_[GY]: YqmlaGpGGYpprrddrGG RICH_[NQ]: NaafQpNQyQ RICH_MOBI_[PY]: YPregrkYPlPPPsgrY RICH_MOBI_[G]: GpGGypprrddrGGrqGypreG RICH_MOBI_[RY]: YppRRddRggRqgYpRegRkY RICH_MOBI_[R]: RRddRggRqgypRegR RICH_MOBI_[Y]: YpprrddrggrqgY YplpppsgrY RICH_MOBI_[GR]: GpGGyppRRddRGGRqGypReGR RICH_MOBI_[GY]: GpGGYpprrddrGGrqGYpreGrkYplpppsG RICH_fLPS_MOBI_[Y]: rqgYpregrkYplpppsgrY