Q9HCS7 SYF1_HUMAN
Gene name: XAB2
Protein name: Pre-mRNA-splicing factor SYF1
List of terms from Generic GO subset, which this protein is a part of:
- anatomical structure development GO:0048856
- biosynthetic process GO:0009058
- cellular component assembly GO:0022607
- cellular nitrogen compound metabolic process GO:0034641
- DNA metabolic process GO:0006259
- embryo development GO:0009790
- mRNA processing GO:0006397
- protein-containing complex assembly GO:0065003
- response to stress GO:0006950
- ribonucleoprotein complex assembly GO:0022618
Table: Top 10 the most similar proteins, based on disordered regions enriched in particular amino acids. Cosine similarity calculation is described here. The whole list can be downloaded at the Download page
| # | UniProt Accession | Gene Name | Cosine Similarity | Generic GO terms |
|---|---|---|---|---|
| 1 | P54219 | SLC18A1 | 0.79811 | transport GO:0006810 vesicle-mediated transport GO:0016192 |
| 2 | Q8WWZ7 | ABCA5 | 0.79687 | cell differentiation GO:0030154 transmembrane transport GO:0055085 transport GO:0006810 |
| 3 | O15033 | AREL1 | 0.77975 | catabolic process GO:0009056 cell death GO:0008219 cellular protein modification process GO:0006464 ... |
| 4 | O15259 | NPHP1 | 0.74873 | anatomical structure development GO:0048856 cell adhesion GO:0007155 cell differentiation GO:0030154 ... |
| 5 | Q96FV9 | THOC1 | 0.73039 | anatomical structure development GO:0048856 biological process involved in symbiotic interaction GO:0044403 biosynthetic process GO:0009058 ... |
| 6 | Q9BRT8 | CBWD1 | 0.72945 | |
| 7 | P09848 | LCT | 0.72903 | carbohydrate metabolic process GO:0005975 |
| 8 | O00148 | DDX39A | 0.71501 | cellular nitrogen compound metabolic process GO:0034641 mRNA processing GO:0006397 nucleocytoplasmic transport GO:0006913 ... |
| 9 | Q5TD94 | RSPH4A | 0.71419 | cellular component assembly GO:0022607 cytoskeleton organization GO:0007010 |
| 10 | Q8TC90 | CCER1 | 0.70685 |
20 40 60 80 100 AA: MVVMARLSRPERPDLVFEEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERALKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHE STMI: DO_DISOPRED3: DDDDDDDDDDDD........................................................................................ DO_IUPRED2A: .................................................................................................... DO_SPOTD: DDDDDDDDDDDDDD...................................................................................... CONSENSUS: DDDDDDDDDDDD........................................................................................ CONSENSUS_MOBI: ....................................................................................................
120 140 160 180 200 AA: RAFVFMHKMPRLWLDYCQFLMDQGRVTHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESAEEYIEYLKSSDRLDEAAQRL STMI: DO_DISOPRED3: .................................................................................................... DO_IUPRED2A: .................................................................................................... DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................................
220 240 260 280 300 AA: ATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYA STMI: DO_DISOPRED3: .................................................................................................... DO_IUPRED2A: .................................................................................................... DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................................
320 340 360 380 400 AA: QFEESMIAAKMETASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEWHKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVA STMI: DO_DISOPRED3: .................................................................................................... DO_IUPRED2A: ............DD...D..........................................DDD.............D........D.............. DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................................
420 440 460 480 500 AA: FAKFYEDNGQLDDARVILEKATKVNFKQVDDLASVWCQCGELELRHENYDEALRLLRKATALPARRAEYFDGSEPVQNRVYKSLKVWSMLADLEESLGTF STMI: DO_DISOPRED3: .................................................................................................... DO_IUPRED2A: .................................................................................................... DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................................
520 540 560 580 600 AA: QSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKAYERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYA STMI: DO_DISOPRED3: .................................................................................................... DO_IUPRED2A: .................................................................................................... DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................................
620 640 660 680 700 AA: QLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLSDEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTT STMI: DO_DISOPRED3: .................................................................................................... DO_IUPRED2A: .................................................................................................... DO_SPOTD: .................................................................................................... CONSENSUS: .................................................................................................... CONSENSUS_MOBI: ....................................................................................................
720 740 760 780 800 AA: GAFWQTWKDFEVRHGNEDTIKEMLRIRRSVQATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLAAEAERDQPLRAQSKILFVRS STMI: DO_DISOPRED3: .................................................DDDDDDDDDDDDDDDDDDDD.....D..DDDDDDDDDDDDDDDDDDDDDDD DO_IUPRED2A: ...................................................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.............. DO_SPOTD: ..................................................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD..D CONSENSUS: ..................................................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD CONSENSUS_MOBI: ......................................D.................DDD................DDD...................... RICH_[AE]: EqrAEqlAAEAErdqplrA RICH_[AL]: LLeqrAeqLAAeAerdqpL RICH_[AQ]: QrAeQlAAeAerdQplrAQ RICH_[Q]: QraeQlaaeaerdQplraQ RICH_[R]: RdqplRaqskilfvRs RICH_[DM]: DlapgqsgMDDM RICH_[EL]: LLEqraEqLaaEaErdqpL RICH_[EQ]: EQraEQlaaEaErdQplraQ
820 840 AA: DASREELAELAQQVNPEEIQLGEDEDEDEMDLEPNEVRLEQQSVPAAVFGSLKED STMI: DO_DISOPRED3: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD....DDD.D.D.DD DO_IUPRED2A: ......DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.DDDDD..D DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.D.........DDDDDD CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD....DDDDDDDDDD CONSENSUS_MOBI: ...................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD RICH_[AE]: AsrEElAElA RICH_[E]: EElaElaqqvnpEEiqlgEdEdEdEmdlEpnEvrlE RICH_[R]: dasR RICH_[DE]: EEiqlgEDEDEDEmDlEpnEvrlE RICH_fLPS_[D]: geDeDeDemD RICH_fLPS_[E]: EEiqlgEdEdEdEmdlEpnE RICH_MOBI_[E]: EdEdEdEmdlEpnEvrlE RICH_MOBI_[DE]: EDEDEDEmDlEpnEvrlE