HHsearch Result

Reference:
H. Cheng, BH. Kim, and N. Grishin (2008). Discrimination between distant homologs and structural analogs: lessons from manually constructed, reliable datasets. J. Mol. Biol. 377(4): 1265-1278
BH. Kim, H. Cheng, and N. Grishin (2009). HorA web server to infer homology between proteins using sequence and structural similarity. Nucleic Acids Res. 37(Web Server issue):W532-8
Comments and suggestions to: grishin@chop.swmed.edu


Query:T515_B.pdb B
Database: SCOP1.69 less than 40% identity downloaded from ASTRAL


Summary of Hits

Click the hit # to scoll down to alignments.

HIT
#
SCOPid PROTEIN SCOP SUPERFAMILY SCOP FOLD SCOP
CLASS
Probability E-value Raw Score
SCOP domains with score better than the threshold (Probability > 0.9)
1 d7odca2 Eukaryotic ornithine decarboxylasePLP-​binding barrelTIM beta/​alpha-​barrelα/β1.000.00351.1
2 d1twia2 Diaminopimelate decarboxylase LysAPLP-​binding barrelTIM beta/​alpha-​barrelα/β1.000.00339.8
3 d1twia1 Diaminopimelate decarboxylase LysAAlanine racemase C-​terminal domain-​likeDomain of alpha and beta subunits of F1 ATP synthase-​likeAll β1.000.00274.8
4 d1knwa2 Diaminopimelate decarboxylase LysAPLP-​binding barrelTIM beta/​alpha-​barrelα/β1.000.00348.7
5 d1knwa1 Diaminopimelate decarboxylase LysAAlanine racemase C-​terminal domain-​likeDomain of alpha and beta subunits of F1 ATP synthase-​likeAll β1.000.00265.5
6 d1hkva2 Diaminopimelate decarboxylase LysAPLP-​binding barrelTIM beta/​alpha-​barrelα/β1.000.00345.7
7 d1hkva1 Diaminopimelate decarboxylase LysAAlanine racemase C-​terminal domain-​likeDomain of alpha and beta subunits of F1 ATP synthase-​likeAll β1.000.00263.9
8 d7odca1 Eukaryotic ornithine decarboxylase (ODC)Alanine racemase C-​terminal domain-​likeDomain of alpha and beta subunits of F1 ATP synthase-​likeAll β1.000.00224.6
9 d1rcqa2 Alanine racemasePLP-​binding barrelTIM beta/​alpha-​barrelα/β0.980.0094.2
10 d1vfsa2 Alanine racemasePLP-​binding barrelTIM beta/​alpha-​barrelα/β0.970.0090.5
11 d1bd0a2 Alanine racemasePLP-​binding barrelTIM beta/​alpha-​barrelα/β0.970.0087.2
SCOP domains with score worse than the threshold (Probability ≤ 0.9)
12 d1rcqa1 Alanine racemaseAlanine racemase C-​terminal domain-​likeDomain of alpha and beta subunits of F1 ATP synthase-​likeAll β0.700.0029.4
13 d1ct5a_ ​(​Hypothetical​(​ protein ybl036cPLP-​binding barrelTIM beta/​alpha-​barrelα/β0.690.0020.7
14 d1dxea_ 2-​dehydro-​3-​deoxy-​galactarate aldolasePhosphoenolpyruvate/​pyruvate domainTIM beta/​alpha-​barrelα/β0.680.0024.1
15 d1v97a5 Xanthine oxidase,​ C-​terminal domainMolybdenum cofactor-​binding domainMolybdenum cofactor-​binding domainα+β0.600.0028.9
16 d1xi3a_ Thiamin phosphate synthaseThiamin phosphate synthaseTIM beta/​alpha-​barrelα/β0.580.0116.5
17 d1i60a_ Hypothetical protein IolIXylose isomerase-​likeTIM beta/​alpha-​barrelα/β0.510.0019.8
18 d1vfsa1 Alanine racemaseAlanine racemase C-​terminal domain-​likeDomain of alpha and beta subunits of F1 ATP synthase-​likeAll β0.490.0024.2
19 d1qpoa1 Quinolinic acid phosphoribosyltransferase (Nicotinate-​nucleotide pyrophosphorylase,​ NadC),​ C-​terminal domainQuinolinic acid phosphoribosyltransferase (Nicotinate-​nucleotide pyrophosphorylase,​ NadC),​ C-​terminal domainTIM beta/​alpha-​barrelα/β0.470.0017.7
20 d1n62b2 Carbon monoxide (CO) dehydrogenase molybdoproteinMolybdenum cofactor-​binding domainMolybdenum cofactor-​binding domainα+β0.450.0024.8
21 d1fq0a_ KDPG aldolaseAldolaseTIM beta/​alpha-​barrelα/β0.430.0312.6
22 d1izca_ Macrophomate synthasePhosphoenolpyruvate/​pyruvate domainTIM beta/​alpha-​barrelα/β0.420.0018.9
23 d1vlba4 Aldehyde oxidoreductaseMolybdenum cofactor-​binding domainMolybdenum cofactor-​binding domainα+β0.420.0023.9
24 d1vhca_ Hypothetical protein HI0047AldolaseTIM beta/​alpha-​barrelα/β0.410.0114.7
25 d1o4ua1 Quinolinic acid phosphoribosyltransferase (Nicotinate-​nucleotide pyrophosphorylase,​ NadC),​ C-​terminal domainQuinolinic acid phosphoribosyltransferase (Nicotinate-​nucleotide pyrophosphorylase,​ NadC),​ C-​terminal domainTIM beta/​alpha-​barrelα/β0.390.0115.1
26 d2tpsa_ Thiamin phosphate synthaseThiamin phosphate synthaseTIM beta/​alpha-​barrelα/β0.390.0312.9
27 d1t3qb2 Quinoline 2-​oxidoreductase large subunit QorLMolybdenum cofactor-​binding domainMolybdenum cofactor-​binding domainα+β0.390.0023.0
28 d1q6oa_ 3-​keto-​L-​gulonate 6-​phosphate decarboxylaseRibulose-​phoshate binding barrelTIM beta/​alpha-​barrelα/β0.380.0213.5
29 d1bd0a1 Alanine racemaseAlanine racemase C-​terminal domain-​likeDomain of alpha and beta subunits of F1 ATP synthase-​likeAll β0.370.0020.5
30 d1uhe.1 Pyruvoyl dependent aspartate decarboxylase,​ ADCADC-​likeDouble psi beta-​barrelAll β0.340.0021.4
31 d1ppya_ Pyruvoyl dependent aspartate decarboxylase,​ ADCADC-​likeDouble psi beta-​barrelAll β0.330.0021.4
32 d1olta_ Oxygen-​independent coproporphyrinogen III oxidase HemNRadical SAM enzymesTIM beta/​alpha-​barrelα/β0.310.0020.0
33 d1q7za1 Cobalamin-​dependent methionine synthase MetH,​ C-​terminal domainDihydropteroate synthetase-​likeTIM beta/​alpha-​barrelα/β0.270.0019.8
34 d7reqa1 Methylmalonyl-​CoA mutase alpha subunit,​ domain 1Cobalamin (vitamin B12)-​dependent enzymesTIM beta/​alpha-​barrelα/β0.250.0213.8
35 d1k77a_ Hypothetical protein YgbM (EC1530)Xylose isomerase-​likeTIM beta/​alpha-​barrelα/β0.240.0116.6
36 d1foba_ Beta-​1,​4-​galactanase(Trans)glycosidasesTIM beta/​alpha-​barrelα/β0.230.0115.8
37 d1i4na_ Indole-​3-​glycerophosphate synthase,​ IPGSRibulose-​phoshate binding barrelTIM beta/​alpha-​barrelα/β0.220.0213.6
38 d1tqja_ D-​ribulose-​5-​phosphate 3-​epimeraseRibulose-​phoshate binding barrelTIM beta/​alpha-​barrelα/β0.210.0116.0
39 d1nvma2 4-​hydroxy-​2-​oxovalerate aldolase DmpG,​ catalytic domainAldolaseTIM beta/​alpha-​barrelα/β0.200.0511.2
40 d1sgja_ Citrate lyase,​ beta subunitPhosphoenolpyruvate/​pyruvate domainTIM beta/​alpha-​barrelα/β0.200.0017.6

d7odca2 Eukaryotic ornithine decarboxylase

Probability: 1.00 E-value:0.00

query         10 DKAKLTRNMERIAHVREKSGAKALLALKCFATWSVFDLMRDYMDGTTSSSLFEVRLGRER     69
                 ::::::::::::::::  ::::::::::::::::::::::::::::::::::::::::::
d7odca2        1 DLGDILKKHLRWLKAL--PRVTPFYAVKCNDSRAIVSTLAAIGTGFDCASKTEIQLVQGL     58

query         70 FGKETHAYSVA--YGDNEIDEVVSHAD-KIIFNSISQLERFADKAAGIARGLRLNPQRLG    126
                 :::::::::::  :::::::::::::: :::::::::::::::::::::::::::: :::
d7odca2       59 GVPAERVIYANPCKQVSQIKYAASNGVQMMTFDSEIELMKVARAHPKAKLVLRIAT-KFG    117

query        127 EWDVPKVERVMDR------INGFMIHNNCENKDFGLFDRMLGEIEE---RFGALIARVDW    177
                 :::::::::::::      :::::::::::::::::::::::::::   :::::::::::
d7odca2      118 ATLKTSRLLLERAKELNIDVIGVSFHVGSGCTDPDTFVQAVSDARCVFDMATEVGFSMHL    177

query        178 VSLGGGIHFTGDD-YPVDAFSARLRAFSDRY-----GVQIYLEPGEASITKS    223
                 ::::::::::::: :::::::::::::::::     ::::::::::::::::
d7odca2      178 LDIGGGFPGSEDTKLKFEEITSVINPALDKYFPSDSGVRIIAEPGRYYVASA    229


d1twia2 Diaminopimelate decarboxylase LysA

Probability: 1.00 E-value:0.00

query         10 DKAKLTRNMERIAHVREKS------GAKALLALKCFATWSVFDLMRDYMDGTTSSSLFEV     63
                 :::::::::::::::::::      :::::::::::::::::::::::::::::::::::
d1twia2        1 SEEQIKINYNRYIEAFKRWEEETGKEFIVAYAYKANANLAITRLLAKLGCGADVVSGGEL     60

query         64 RLGRERFGK-ETHAYSV-AYGDNEIDEVVSHAD-KIIFNSISQLERFADKA----AGIAR    116
                 ::::::::: ::::::: ::::::::::::::: :::::::::::::::::    :::::
d1twia2       61 YIAKLSNVPSKKIVFNGNCKTKEEIIMGIEANIRAFNVDSISELILINETAKELGETANV    120

query        117 GLRLNP----------------QRLGEWDV-----PKVERVMD----RINGFMIHNNCEN    151
                 ::::::                ::::::::     ::::::::    :::::::::::::
d1twia2      121 AFRINPNVNPKTHPKISTGLKKNKFGLDVESGIAMKAIKMALEMEYVNVVGVHCHIGSQL    180

query        152 KDFGLFDRMLGEIEERFGAL---IARVDWVSLGGGIHFTGDDY----PVDAFSARLRAFS    204
                 ::::::::::::::::::::   ::::::::::::::::::::    :::::::::::::
d1twia2      181 TDISPFIEETRKVMDFVVELKEEGIEIEDVNLGGGLGIPYYKDKQIPTQKDLADAIINTM    240

query        205 -----DRYGVQIYLEPGEASITKS    223
                      :::::::::::::::::::
d1twia2      241 LKYKDKVEMPNLILEPGRSLVATA    264


d1twia1 Diaminopimelate decarboxylase LysA

Probability: 1.00 E-value:0.00

query        208 GVQIYLEPGEASITKSTTLEVTVLDTLY--NKNLAIVDSSIEAHMLDLLIYRETAKVLP-    264
                 :::::::::::::: :::::::::::::  :::::::::::: :::::::::::::::: 
d1twia1       21 AIELAEKFGTPLYV-MGYLLGKVHHIKETPVTKWVMIDAGMN-DMMRPAMYEAYHHIINC     78

query        265 --NEGSHSYMICGKSCLAGDVFGEFRFAEELKVGDRISFQDAAGYTMVKKNWFNGVKMPA    322
                   ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
d1twia1       79 KVKNEKEVVSIAGGLCESSDVFGRDRELDKVEVGDVLAIFDVGAYGISMANNYNARGRPR    138

query        323 IAIRELDGSVRTVREFTYADYEQS    346
                 ::::::::::::::::::::::::
d1twia1      139 MVLTSKKGVFLIRERETYADLIAK    162


d1knwa2 Diaminopimelate decarboxylase LysA

Probability: 1.00 E-value:0.00

query         10 DKAKLTRNMERIAHVREKSGAKALLALKCFATWSVFDLMRDYMDGTTSSSLFEVRLGRER     69
                 ::::::::::::::::     :::::::::::::::::::::::::::::::::::::::
d1knwa2        1 DAQIIRRQIAALKQFD-----VVRFAQKACSNIHILRLMREQGVKVDSVSLGEIERALAA     55

query         70 FGKET------HAYSVAYGDNEIDEVVSHADKIIFNSISQLERFADKAAGIARGLRLNPQ    123
                 :::::      :::::::::::::::::::::::::::::::::::::::::::::::::
d1knwa2       56 GYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVSPGHRVWLRVNPG    115

query        124 ----------------RLGEWDVPKV------ERVMDRINGFMIHNNCENKDFGLFDRML    161
                                 ::::::::::      :::::::::::::::::: :::::::::
d1knwa2      116 FGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGV-DYAHLEQVC    174

query        162 GEIEERFGALIARVDWVSLGGGIHFTGDD----YPVDAFSARLRAFSDRY------GVQI    211
                 :::::::::::::::::::::::::::::    :::::::::::::::::      ::::
d1knwa2      175 GAMVRQVIEFGQDLQAISAGGGLSVPYQQGEEAVDTEHYYGLWNAAREQIARHLGHPVKL    234

query        212 YLEPGEASITKST    224
                 :::::::::::::
d1knwa2      235 EIEPGRFLVAQSG    247


d1knwa1 Diaminopimelate decarboxylase LysA

Probability: 1.00 E-value:0.00

query        193 VDAFSARLRAFSDRYGVQIYLEPGEASITKSTTLEVTVLDTLYNKNLAIVDSSIEAHMLD    252
                 ::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::
d1knwa1        1 PHSLFSTDTDLTAENLLRLPAEFGCPVWVYVLITQVRSVKQMGSRHFVLVDAGFN-DLMR     59

query        253 LLIYRETAKVLP---------NEGSHSYMICGKSCLAGDVFGEF-------RFAEELKVG    296
                 ::::::::::::         :::::::::::::::::::::::       :::::::::
d1knwa1       60 PAMYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAG    119

query        297 DRISFQDAAGYTMVKKNWFNGVKMPAIAIRELDGSVRTVREFTYADYEQS    346
                 ::::::::::::::::::::::::::::::::::::::::::::::::::
d1knwa1      120 DYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLAL    169


d1hkva2 Diaminopimelate decarboxylase LysA

Probability: 1.00 E-value:0.00

query         10 DKAKLTRNMERIAHVREKSGAKALLALKCFATWSVFDLMRDYMDGTTSSSLFEVRLGRER     69
                 ::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::
d1hkva2        1 DEDDFRSRCRETAAAFG-SGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHA     59

query         70 FGKETHAYS--VAYGDNEIDEVVSHAD-KIIFNSISQLERFADKAAGIA----RGLRLNP    122
                 :::::::::  :::::::::::::::: :::::::::::::::::::::    :::::::
d1hkva2       60 SFPPERITLHGNNKSVSELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTV    119

query        123 ----------------QRLGEWDVP--KVERVMDR-------INGFMIHNNCENKDFGLF    157
                                 :::::::::  ::::::::       ::::::::::::::::::
d1hkva2      120 GVEAHTHEFISTAHEDQKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGF    179

query        158 DRMLGEIEERFGAL--------IARVDWVSLGGGIHFTGDDYP----VDAFSARLRAFSD    205
                 ::::::::::::::        :::::::::::::::::::::    :::::::::::::
d1hkva2      180 ELAAHRVIGLLRDVVGEFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVS    239

query        206 RY-------GVQIYLEPGEASITKS    223
                 ::       ::::::::::::::::
d1hkva2      240 DESTAVGLPTPKLVVEPGRAIAGPG    264


d1hkva1 Diaminopimelate decarboxylase LysA

Probability: 1.00 E-value:0.00

query        189 DDYPVDAFSARLRAFSDRYG---VQIYLEPGEASITKSTTL---EVTVLDTLYN--KNLA    240
                 ::::::::::::::::::::   ::::::::::::::::::   ::::::::::  ::::
d1hkva1        8 PNVWPRNTTRDEVGVVCIAGIPLTQLAQEYGTPLFVIITLYEVGTVKDVDVSATAHRRYV     67

query        241 IVDSSIEAHMLDLLIYRETAKVL-----PNEGSHSYMICGKSCLAGDVFGEFRFAEE-LK    294
                 ::::::: :::::::::::::::     ::::::::::::::::::::::::::::: ::
d1hkva1       68 SVDGGMS-DNIRTALYGAQYDVRLVSRVSDAPPVPARLVGKHCESGDIIVRDTWVPDDIR    126

query        295 VGDRISFQDAAGYTMVKKNWFNGVKMPAIAIRELDGSVRTVREFTYADYEQS    346
                 ::::::::::::::::::::::::::::::::::::::::::::::::::::
d1hkva1      127 PGDLVAVAATGAYCYSLSSRYNMVGRPAVVAVHAGNARLVLRRETVDDLLSL    178


d7odca1 Eukaryotic ornithine decarboxylase (ODC)

Probability: 1.00 E-value:0.00

query        197 SARLRAFSDRYGV--QIYLEPGEASITKSTTLEVTVLDTL--YNKNLAI-VDSSIEAHML    251
                 :::::::::::::  :::::::::::  ::::::::::::  ::::::: :::::: :::
d7odca1       10 CHILDEGFTAKDILDQKINDKDAFYV--AFTLAVNIIAKKTVWEQTFMYYVNDGVY-GSF     66

query        252 DLLIYRETAKVLP-------NEGSHSYMICGKSCLAGDVFGEFRFAEELKVGDRISFQDA    304
                 :::::::::::::       ::::::::::::::::::::::::::::::::::::::::
d7odca1       67 NCILYDHAHVKALLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENM    126

query        305 AGYTMVKKNWFNGVKMPAIAIRELDGSV    332
                 ::::::::::::::::::::::::::::
d7odca1      127 GAYTVAAASTFNGFQRPNIYYVMSRPMW    154


d1rcqa2 Alanine racemase

Probability: 0.98 E-value:0.00

query          9 IDKAKLTRNMERIAHVREKSGAKALLALKCFA----TWSVFDLMRDYMDGTTSSSLFEVR     64
                 ::::::::::::::::   :::::::::::::    ::::::::::::::::::::::::
d1rcqa2        1 IDLQALRHNYRLAREA---TGARALAVIKADAYGHGAVRCAEALAAEADGFAVACIEEGL     57

query         65 LGRERFGKETHAYSVAY-GDNEIDEVVSHADKIIFNSISQLERFADKA--AGIARGLRLN    121
                 ::::::::::::::::: ::::::::::::::::::::::::::::::  ::::::::::
d1rcqa2       58 ELREAGIRQPILLLEGFFEASELELIVAHDFWCVVHCAWQLEAIERASLARPLNVWLXMD    117

query        122 P--QRLGEWDVPKVERV-------MDRINGFMIHNNCEN-KDFGLFDRMLGEIEERFGAL    171
                 :  ::::::::::::::       ::::::::::::::: ::::::::::::::::::::
d1rcqa2      118 SGMHRVGFFPEDFRAAHERLRASGKVAKIVMMSHFSRADELDCPRTEEQLAAFSAASQGL    177

query        172 IARVDWVSLGGGIHFTGDDYPVDAFSARL    200
                 :::::::::::::::::::::::::::::
d1rcqa2      178 EGEISLRNSPAVLGWPKVPSDWVRPGILL    206


d1vfsa2 Alanine racemase

Probability: 0.97 E-value:0.00

query         10 DKAKLTRNMERIAHVREKSGAKALLALKCFA----TWSVFDLMRDYM-DGTTSSSLFEVR     64
                 ::::::::::::::::  :::::::::::::    :::::::::::: ::::::::::::
d1vfsa2        1 DLDAVRANVRALRARA--PRSALMAVVKSNAYGHGAVPCARAAQEAGAAWLGTATPEEAL     58

query         65 LGRERFGKETHAYSVAYGDNEIDEVVSHADKIIFNSISQLERFADKAAGIA----RGLRL    120
                 :::::::::::::::::::::::::::::::::::::::::::::::::::    :::::
d1vfsa2       59 ELRAAGIQGRIMCWLWTPGGPWREAIETDIDVSVSGMWALDEVRAAARAAGRTARIQLXA    118

query        121 NPQ--RLGEWDVPKVERVM----------DRINGFMIHNNCENKDFGLFDRM----LGEI    164
                 :::  ::::::::::::::          :::::::::::::::::::::::    ::::
d1vfsa2      119 DTGLGRNGCQPADWAELVGAAVAAQAEGTVQVTGVWSHFACADEPGHPSIRLQLDAFRDM    178

query        165 EERFGALIARVDWVSLGG    182
                 ::::::::::::::::::
d1vfsa2      179 LAYAEKEGVDPEVRHIAN    196


d1bd0a2 Alanine racemase

Probability: 0.97 E-value:0.00

query          9 IDKAKLTRNMERIAHVREKSGAKALLALKCFA----TWSVFDLMRDYM-DGTTSSSLFEV     63
                 :::::::::::::::::: :::::::::::::    :::::::::::: :::::::::::
d1bd0a2        1 VDLDAIYDNVENLRRLLP-DDTHIMAVVKANAYGHGDVQVARTALEAGASRLAVAFLDEA     59

query         64 RLGRERFGKETHAYSVAYGDNEIDEVVSHADKIIFNSISQLERFADKAAG---IARGLRL    120
                 ::::::::::::::::::::::::::::::::::::::::::::::::::   :::::::
d1bd0a2       60 LALREKGIEAPILVLGASRPADAALAAQQRIALTVFRSDWLEEASALYSGPFPIHFHLKM    119

query        121 NPQ--RLGEWDVPKVERVMDRIN--------GFMIHNNCEN-KDFGLFDRMLGEIEERFG    169
                 :::  ::::::::::::::::::        :::::::::: ::::::::::::::::::
d1bd0a2      120 DTGMGRLGVKDEEETKRIVALIERHPHFVLEGLYTHFATADEVNTDYFSYQYTRFLHMLE    179

query        170 ALIARVDWVSLG    181
                 ::::::::::::
d1bd0a2      180 WLPSRPPLVHCA    191


d1rcqa1 Alanine racemase

Probability: 0.70 E-value:0.00

query        222 KSTTLEVTVLDT-----------------LYNKNLAIVDSSIEAHMLDLLIYRETAKVLP    264
                 ::::::::::::                 :::::::::::::::::::::::::::::::
d1rcqa1        5 RALTLESKVISVRDLPAGEPVGYGARYSTERRQRIGVVAMGYADGYPRHAADGTLVFIDG     64

query        265 NEGSHSYMICGKSCLAGDVFGEFRFA-EELKVGDRISFQDAAGYTMVKKNWFNGVK    319
                     ::::::::::  :::::::::: :::::::::::::::::::::::::::::
d1rcqa1       65 ----KPGRLVGRVS--MDMLTVDLTDHPQAGLGSRVELWGPNVPVGALAAQFGSIP    114


d1ct5a_ ​(​Hypothetical​(​ protein ybl036c

Probability: 0.69 E-value:0.00

query         11 KAKLTRNMERIAHVRE----KSGAKALLALKCFATWSVFDLMRDYMDGTTSSSLFEVRLG     66
                 ::::::::::::::::    ::::::::::::::::::::::::::::::::::::::::
d1ct5a_       10 KTQLIAQYESVREVVNAEAKNVKILLLVVSKLKPASDIQILYDHGVREFGENYVQELIEK     69

query         67 RERFGKETHAYSVA----YGDNEIDEVVSHADKIIFNSISQLERFADKAAGIA-------    115
                 ::::::::::::::    :::::::::::::::::::::::::::::::::::       
d1ct5a_       70 AKLLPDDIKWHFIGGLQTNKCKDLAKVPNLYSVETIDSLKKAKKLNESRAKFQPDCNPIL    129

query        116 RGLRLN----PQRLGEWDVPKVERVM-----DRINGFMIHNNCENKDFGLFDRMLGEIEE    166
                 ::::::    ::::::::::::::::     :::::::::::::::::::::::::::::
d1ct5a_      130 CNVQINTSHEDQKSGLNNEAEIFEVIDFFLSEECKYIKLNGLMTIGSWNRDFATLVEWKK    189

query        167 RFGALIARVDWVSLG    181
                 :::::::::::::::
d1ct5a_      190 KIDAKFGTSLKLSMG    204


d1dxea_ 2-​dehydro-​3-​deoxy-​galactarate aldolase

Probability: 0.68 E-value:0.00

query         19 ERIAHVREKSGAKALLALKCFATWSVFDLMRDYMDG----------TTSSSLFEVRLGRE     68
                 ::::::::: ::::::::::::::::::::::::::          ::::::::::::::
d1dxea_        5 NKFKAALAA-KQVQIGCWSALSNPISTEVLGLAGFDWLVLDGEHAPNDISTFIPQLMALK     63

query         69 RFGKETHAYSVAYGDNEIDEVVSHADKII----FNSISQLERFADKAAGIARGLR-----    119
                 :::::::::::::::::::::::::::::    ::::::::::::::::::::::     
d1dxea_       64 GSASAPVVRVPTNEPVIIKRLLDIGFYNFLIPFVETKEEAELAVASTRYPPEGIRGVSVS    123

query        120 LNPQRLGEWDVPKVERVMDRINGFMIHNNCENKDFGLFDRMLGEIEER--FGALIARVDW    177
                 :::::::::::::::::::::      :::::::::::::: ::::::  ::::::::::
d1dxea_      124 HRANMFGTVADYFAQSNKNIT------ILVQIESQQGVDNV-DAIAATEGVDGIFVGPSD    176

query        178 VSLGGGIHFTGDDYPVDAFSARLRAFSDRYGVQIYLEPG    216
                 :::::::::::::::::::::::::::::::::::::::
d1dxea_      177 LAAALGHLGNASHPDVQKAIQHIFNRASAHGKPSGILAP    215


d1v97a5 Xanthine oxidase,​ C-​terminal domain

Probability: 0.60 E-value:0.00

query        142 GFMIHNNCENKDFGLFDRMLGEIEERFGALIARVDWVSLGGGIHFTGDDYPVDAFSARLR    201
                 :::::::::  :::::::::::::: ::::::::::::::::::::::::::::::::::
d1v97a5       65 EMELFVSTQ--NAMKTQSFVAKMLG-VPVNRILVRVKRMGGGFGGKETRSTLVSVAVALA    121

query        202 AFSDRYGVQIYL    213
                 ::::::::::::
d1v97a5      122 AYKTGHPVRCML    133


d1xi3a_ Thiamin phosphate synthase

Probability: 0.58 E-value:0.01

query          6 YYLIDKAKLTRNMERIAHVREKSGAKALLALKCFATW-------SVFDLMRDYMDGTTSS     58
                 :::::::::::::::::::::::::::::::::::::       ::::::::::::::::
d1xi3a_        8 LYVITDRRLKPEVESVREALEGGATAIQMRIKNAPTREMYEIGKTLRQLTREYDALFFVD     67

query         59 SLFEVRLGRERF-----------------GKETHAYSVAYGDNEIDEVVSHA-DKIIFNS    100
                 ::::::::::::                 ::::::::::::::::::::::: :::::::
d1xi3a_       68 DRVDVALAVDADGVQLGPEDMPIEVAKEIAPNLIIGASVYSLEEALEAEKKGADYLGAGS    127

query        101 I-------SQLERFADKAAGIARGLRLNPQRLGEWDVPKVERVMDRINGFMIHNNCENKD    153
                 :       :::::::::::::::::::   :::::::::::::::::::::  :::::::
d1xi3a_      128 VFPTDARVIGLEGLRKIVESVKIPVVA---IGGINKDNAREVLKTGVDGIA--VISAVMG    182

query        154 FGLFDRMLGEIEERFGA    170
                 :::::::::::::::::
d1xi3a_      183 AEDVRKATEELRKIVEE    199


d1i60a_ Hypothetical protein IolI

Probability: 0.51 E-value:0.00

query        100 SISQLERFADKAAGIARGLRL---NPQRLGEWDVPKVERVMD----RINGFMIHNNCENK    152
                 :::::::::::::::::::::   ::::::::::::::::::    ::::::::::::::
d1i60a_       15 NLKLDLELCEKHGYDYIEIRTMDKLPEYLKDHSLDDLAEYFQTHHIKPLALNALVFFNNR     74

query        153 DFGLFDRM---LGEIEERFGALIARVDWVSLGGGIHFTGDDYPVDAFSARLRA---FSDR    206
                 ::::::::   ::::::::::::::::::::::::::::::::::::::::::   ::::
d1i60a_       75 DEKGHNEIITEFKGMMETCKTLGVKYVVAVPLVTEQKIVKEEIKKSSVDVLTELSDIAEP    134

query        207 YGVQIYLEP    215
                 :::::::::
d1i60a_      135 YGVKIALEF    143


d1vfsa1 Alanine racemase

Probability: 0.49 E-value:0.00

query        222 KSTTLEVTVLDT-----------------LYNKNLAIVDSSIEAHMLDLLIYRETAKVLP    264
                 ::::::::::::                 :::::::::::::::::::::::::::::::
d1vfsa1        8 EIMTLRASLALVKTVPAGHGVSYGHHYVTESETHLALVPAGYADGIPRNASGRGPVLVAG     67

query        265 NEGSHSYMICGKSCLAGDVFGEFRFAEELKVGDRISF    301
                     ::::::::::  :::::::::::::::::::::
d1vfsa1       68 ----KIRRAAGRIA--MDQFVVDLGEDLAEAGDEAVI     98


d1qpoa1 Quinolinic acid phosphoribosyltransferase (Nicotinate-​nucleotide pyrophosphorylase,​ NadC),​ C-​terminal domain

Probability: 0.47 E-value:0.00

query         14 LTRNMERIAHVREKSGAKALLALKCFATWSVFDLMRDYMDGTT-----------------     56
                 :::::::::::::::::::::::::::::::::::::::::::                 
d1qpoa1        1 IATATAAWVDAVRGTKAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHV     60

query         57 --SSSLFEVRLGRERFGKETHAYSVAYGDNEIDEVVSHA-DKIIFNSIS--QLERFADKA    111
                   ::::::::::::::::::::::::::::::::::::: :::::::::  :::::::::
d1qpoa1       61 AAAGSVVDALRAVRNAAPDLPCEVEVDSLEQLDAVLPEKPELILLDNFAVWQTQTAVQRR    120

query        112 AGIARGLRLNPQRLGEWDVPKVERVMDRINGFMI    145
                 :::::::::::: :::::::::::::::::::::
d1qpoa1      121 DSRAPTVMLESS-GGLSLQTAATYAETGVDYLAV    153


d1n62b2 Carbon monoxide (CO) dehydrogenase molybdoprotein

Probability: 0.45 E-value:0.00

query        142 GFMIHNNCENKDFGLFDRMLGEIEERFGALIARVDWVSLGGGIHFTGDDYPVDAFSARLR    201
                 :::::::::  :::::::::::::: ::::::::::::::::::::::::::::::::::
d1n62b2       86 ELTLWGTFQ--APHVIRTVVSLISG-LPEHKIHVIAPDIGGGFGNKVGAYSGYVCAVVAS    142

query        202 AFSDRYGVQIYL    213
                 ::::: ::::::
d1n62b2      143 IVLGV-PVKWVE    153


d1fq0a_ KDPG aldolase

Probability: 0.43 E-value:0.03

query          7 YLIDKAKLTRNMERIAHVREKSGAKALLALKCFATWSVFDLMRDYMDGTTSSSLFEVRLG     66
                 :::::::::::::::::::::    :::::::::::::::::::::::::::::::::::
d1fq0a_       46 VTLRTECAVDAIRAIAKEVPE----AIVGAGTVLNPQQLAEVTEAGAQFAISPGLTEPLL    101

query         67 RERFGKETHAYSVAYGDNEIDEVVSHADKI-------IFNSISQLERFADKAAGIARGLR    119
                 ::::::::::::::::::::::::::::::       :::::::::::::::::::::  
d1fq0a_      102 KAATEGTIPLIPGISTVSELMLGMDYGLKEFKFFPAEANGGVKALQAIAGPFSQVRFC--    159

query        120 LNPQRLGEWDVPKVERVMDRINGFMIHNNCENK--------DFGLFDRMLGEIEERFG    169
                     :::::::::::::: ::::::::::::::        :::::::::::::::::
d1fq0a_      160 ----PTGGISPANYRDYL-ALKSVLCIGGSWLVPADALEAGDYDRITKLAREAVEGAK    212


d1izca_ Macrophomate synthase

Probability: 0.42 E-value:0.00

query         19 ERIAHVREKSGAKALLALKCFATWSVFDLMRDYMDGT----------TSSSLFEVRLGRE     68
                 :::::::::::::::::::::::::::::::::::::          :::::::::::::
d1izca_       29 QALKDAMADPSKTLMGVAHGIPSTFVTKVLAATKPDFVWIDVEHGMFNRLELHDAIHAAQ     88

query         69 RFGKE---THAYSVAYGDNEIDEVVSHADKI----IFNSISQLERFADKAAGIARGLR    119
                 :::::   :::::::::::::::::::::::    :::::::::::::::::::::::
d1izca_       89 HHSEGRSLVIVRVPKHDEVSLSTALDAGAAGIVIPHVETVEEVREFVKEMYYGPIGRR    146


d1vlba4 Aldehyde oxidoreductase

Probability: 0.42 E-value:0.00

query        142 GFMIHNNCENKDFGLFDRMLGEIEERFGALIARVDWVSLGGGIHFTGDDYPVDAFSARLR    201
                 :::::::::  :::::::::::::: ::::::::::::::::::::::::  ::::::::
d1vlba4       72 KCYIHSKSI--GVHLHLYMIAPGVG-LEPDQLVLVANPMGGTFGYKFSPT--SEALVAVA    126

query        202 AFSDRYGVQIYL    213
                 ::::::::::::
d1vlba4      127 AMATGRPVHLRY    138


d1vhca_ Hypothetical protein HI0047

Probability: 0.41 E-value:0.01

query         15 TRNMERIAHVREKSGAKALLALKCFATWSVFDLMRDYMDGTTSSSLFEVRLGRERFGKET     74
                 :::::::::::::    :::::::::::::::::::::::::::::::::::::::::::
d1vhca_       53 ADAIRLLRANRPD----FLIAAGTVLTAEQVVLAKSSGADFVVTPGLNPKIVKLCQDLNF    108

query         75 HAYSVAYGDNEIDEVVSHADKII-------FNSISQLERFADKAAGIARGLRLNPQRLGE    127
                 :::::::::::::::::::::::       ::::::::::::::::::::      ::::
d1vhca_      109 PITPGVNNPMAIEIALEMGISAVKFFPAEASGGVKMIKALLGPYAQLQIM------PTGG    162

query        128 WDVPKVERVMDRINGFMIHNNCENK--------DFGLFDRMLGEIEERFGA    170
                 :::::::::: ::::::::::::::        ::::::::::::::::::
d1vhca_      163 IGLHNIRDYL-AIPNIVACGGSWFVEKKLIQSNNWDEIGRLVREVIDIIKE    212


d1o4ua1 Quinolinic acid phosphoribosyltransferase (Nicotinate-​nucleotide pyrophosphorylase,​ NadC),​ C-​terminal domain

Probability: 0.39 E-value:0.01

query         14 LTRNMERIAHVREKSGAKALLALKCFATWSVFDLMRDYMDGTTSS------------SLF     61
                 ::::::::::::  :::::::::::::::::::::::::::::::            :::
d1o4ua1        1 VATTTRRFAEKL--KHAKIAATRKILPGLGVLQKIAVVHGGGDCVMIKDNHLKMYGSAER     58

query         62 EVRLGRERFGKETHAYSVAYGDNEIDEVVSHADK-IIFNSISQ--LERFADKAAGIARGL    118
                 :::::::::::::::::::::::::::::::::: ::::::::  :::::::::::::::
d1o4ua1       59 AVQEVRKIIPFTTKIEVEVENLEDALRAVEAGADIVMLDNLSPEEVKDISRRIKDINPNV    118

query        119 RLNPQRLGEWDVPKVERVMDRINGFMI    145
                 ::::: :::::::::::::::::::::
d1o4ua1      119 IVEVS-GGITEENVSLYDFETVDVISS    144


d2tpsa_ Thiamin phosphate synthase

Probability: 0.39 E-value:0.03

query          9 IDKAKLTRNMERIAHVREKSGAKALLALKCFATWSVFDLMRDYMDGTTSSSLFEVRLGRE     68
                 ::::::::::::::::::::::::::    ::::::::::::::::::::::::::  ::
d2tpsa_       57 LTGEARIKFAEKAQAACREAGVPFIV----NDDVELALNLKADGIHIGQEDANAKE--VR    110

query         69 RFGKETHAYSVAYGDNEIDEVVSHADKII----------------FNSISQLERFADKAA    112
                 :::::::::::::::::::::::::::::                :::::::::::::::
d2tpsa_      111 AAIGDMILGVSAHTMSEVKQAEEDGADYVGLGPIYPTETKKDTRAVQGVSLIEAVRRQGI    170

query        113 GIARGLRLNPQRLGEWDVPKVERVMDRINGFMIHNNCENKDFGLFDRMLGEIEERFGAL    171
                 ::::::     :::::::::::::::::::::  :::::::::::::::::::::::::
d2tpsa_      171 SIPIVG-----IGGITIDNAAPVIQAGADGVS--MISAISQAEDPESAARKFREEIQTY    222


d1t3qb2 Quinoline 2-​oxidoreductase large subunit QorL

Probability: 0.39 E-value:0.00

query        142 GFMIHNNCENKDFGLFDRMLGEIEERFGALIARVDWVSLGGGIHFTGDDYPVDAFSARLR    201
                 :::::::::  :::::::::::::: ::::::::::::::::::::::::::::::::::
d1t3qb2       51 QLILWTATQ--MPSFVRTMVAMFCA-IPEHLIEVRVPDVGGGFGQKAHLHPEELLVCLLS    107

query        202 AFSDRYGVQIYL    213
                 ::::: ::::::
d1t3qb2      108 RALGR-PVRWIE    118


d1q6oa_ 3-​keto-​L-​gulonate 6-​phosphate decarboxylase

Probability: 0.38 E-value:0.02

query         16 RNMERIAHVREKSGAKALLALKCFATWSV-FDLMRDYMDGTTSSS--------LFEVRLG     66
                 ::::::::::  ::::::::::::::::: :::::::::::::::        :::::::
d1q6oa_       43 RAVRDLKALY--PHKIVLADAKIADAGKILSRMCFEANADWVTVICCADINTAKGALDVA    100

query         67 RERFGKETHAYSVAYGDNEIDEVVSHADKIIF-------------NSISQLERFADKAAG    113
                 ::::::::::::::::::::::::::::::::             :::::::::::: ::
d1q6oa_      101 KEFNGDVQIELTGYWTWEQAQQWRDAGIGQVVYHRSRDAQAAGVAWGEADITAIKRL-SD    159

query        114 IARGLRLNPQRLGEWDVPKVERVMDRINGFMIHNNCENKDFGLFDRMLGEIEERFGAL    171
                 ::::::::::::::::::::::::::::     :::::::::::::::::::::::::
d1q6oa_      160 MGFKVTVTGGLALEDLPLFKGIPIHVFI-----AGRSIRDAASPVEAARQFKRSIAEL    212


d1bd0a1 Alanine racemase

Probability: 0.37 E-value:0.00

query        222 KSTTLEVTVLDT-----------------LYNKNLAIVDSSIEAHMLDLLIYRETAKVLP    264
                 ::::::::::::                 ::::::::::::::::::: :::::::::::
d1bd0a1        9 AEFSLHSRLVHVKKLQPGEKVSYGATYTAQTEEWIGTIPIGYADGWLR-RLQHFHVLVDG     67

query        265 NEGSHSYMICGKSCLAGDVFGEFRFAEELKVGDRISFQD    303
                     ::::::::::  ::::::::::: :::::::::::
d1bd0a1       68 ----QKAPIVGRIC--MDQCMIRLPGP-LPVGTKVTLIG     99


d1uhe.1 Pyruvoyl dependent aspartate decarboxylase,​ ADC

Probability: 0.34 E-value:0.00

query        261 KVLPNEGSHSYMICGKSCLAGDVFGEFRFAEELKVGDRISFQDAAGYTMVKKNWFNGVKM    320
                 ::::::::::::::::  :::::::::::::::::::::::::::::::::::::    :
d1uhe.1       47 DVNNGERFSTYVILGK--KRGEICVNGAAARKVAIGDVVIILAYASMNEDEINAH----K    100

query        321 PAIAIRELDGSVRTVREF    338
                 ::::::::::::::::::
d1uhe.1      101 PSIVLVDEKNEILEKGLE    118


d1ppya_ Pyruvoyl dependent aspartate decarboxylase,​ ADC

Probability: 0.33 E-value:0.00

query        261 KVLPNEGSHSYMICGKSCLAGDVFGEFRFAEELKVGDRISFQDAAGYTMVKKNWFNGVKM    320
                 :::::::::::::::::: ::::::::::::::::::::::::::::::::::::    :
d1ppya_       48 NVTNGKRFSTYAIAAERG-SRIISVNGAAAHXASVGDIVIIASFVTMPDEEARTW----R    102

query        321 PAIAIRELDGSVR    333
                 :::::::::::::
d1ppya_      103 PNVAYFEGDNEMK    115


d1olta_ Oxygen-​independent coproporphyrinogen III oxidase HemN

Probability: 0.31 E-value:0.00

query        142 GFMIHNNCENKDFGLFDRMLGEIEERFGA--LIARVDWVSLGGGIHFTGDDYPVDAFSAR    199
                 :::::::::::::::::::::::::::::  :::::::::::::::::::::::::::::
d1olta_       60 GCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRHVSQLHWGGGTPTYLNKAQISRLMKL    119

query        200 LRAFSDRY-GVQIYLE    214
                 :::::::: :::::::
d1olta_      120 LRENFQFNADAEISIE    135


d1q7za1 Cobalamin-​dependent methionine synthase MetH,​ C-​terminal domain

Probability: 0.27 E-value:0.00

query         98 FNSISQLERFADKAAGIARGLRLNPQRLGEWDVPKVERVMDRINGFMIHNNCENKDFGLF    157
                 ::::::::::::::::::::::::::::: ::::::::::::::::::     :::::::
d1q7za1       63 IESQIDVRYVEKIVQTLPYVSNVPLSLDI-QNVDLTERALRAYPGRSL-----FNSAKVD    116

query        158 DRMLGEIEERFGALIARVDWVSLGGGIHFTGDDYPVDAFSARLRAFSDRYGV--QIYLEP    215
                 ::::::::::::::::::::::::::  ::::::::::::::::::::::::  ::::::
d1q7za1      117 EEELEMKINLLKKYGGTLIVLLMGKD--VPKSFEERKEYFEKALKILERHDFSDRVIFDP    174

query        216 G    216
                 :
d1q7za1      175 G    175


d7reqa1 Methylmalonyl-​CoA mutase alpha subunit,​ domain 1

Probability: 0.25 E-value:0.02

query         84 NEIDEVVSHADK-----------------------------IIFNSISQLERFADKAAGI    114
                 ::::::::::::                             :::::::::::::::::::
d7reqa1       97 AFYRRNLAAGQKGLSVAFDLPTHRGYDSDNPRVAGDVGMAGVAIDSIYDMRELFAGIPLD    156

query        115 ARGLRLNPQRLGEWDVPKVERVMDR---------------INGFMIHNNCENKDFGLFDR    159
                 :::::::::::::::::::::::::               ::::::::::::::::::::
d7reqa1      157 QMSVSMTMNGAVLPILALYVVTAEEQGVKPEQLAGTIQNDILKEFMVRNTYIYPPQPSMR    216

query        160 MLGEIEERFGALIARVDWVSLGGGIHFTGDDYPVDAFSARLRAFSD    205
                 ::::::::::::::::::::::::::::::::::::::::::::::
d7reqa1      217 IISEIFAYTSANMPKWNSISISGYHMQEAGATADIEMAYTLADGVD    262


d1k77a_ Hypothetical protein YgbM (EC1530)

Probability: 0.24 E-value:0.01

query         86 IDEVVSHADKIIFN-------------SISQLERFADKAAGIARGLRLNPQRL---GEWD    129
                 ::::::::::::::             ::::::::::::::::::::::::::   ::::
d1k77a_      130 ADRFAPHGKRILVEALSPGVKPHYLFSSQYQALAIVEEVARDNVFIQLDTFHAQKVDGNL    189

query        130 VPKVERVMDRINGFMI-------HNNCENKDFGLFDRMLGEI    164
                 ::::::::::::::::       :::::::::::::::::::
d1k77a_      190 THLIRDYAGKYAHVQIAGLPDRHEPDDGEINYPWLFRLFDEV    231


d1foba_ Beta-​1,​4-​galactanase

Probability: 0.23 E-value:0.01

query         54 GTTSSSLFEVRLGRERFGKETHAYSVAYGDNEIDEVVSHADKIIF-----------NSIS    102
                 :::::::::::::     :::::::::::::::::::::::::::           ::::
d1foba_        6 GADISSLLLLEDE-----GYSYKNLNGQTQALETILADAGINSIRQRVWVNPSDGSYDLD     60

query        103 QLERFADKAAGIARGLRLNPQRLGEWDVPKVERVMDRINGFMIHNNCENKDFGLFDRMLG    162
                 ::::::::::::::::::::::::::::::::::::::::::::     :::::::::::
d1foba_       61 YNLELAKRVKAAGMSLYLDLHLSDTWADPSDQTTPSGWSTTDLG-----TLKWQLYNYTL    115

query        163 EIEERFGALIARVDWVSLG-----GGIHFTGDDYPVDAFSARLRAFSD    205
                 :::::::::::::::::::     ::::::::::::::::::::::::
d1foba_      116 EVCNTFAENDIDIEIISIGNEIRAGLLWPLGETSSYSNIGALLHSGAW    163


d1i4na_ Indole-​3-​glycerophosphate synthase,​ IPGS

Probability: 0.22 E-value:0.02

query         57 SSSLFEVRLGRERFGKETHAYSVAYGDNEIDEVVSHADKIIFN------SISQLERFADK    110
                 :::::::::::::::::::::::::::::::::::::::::::      :::::::::::
d1i4na_      110 YIDTVQVKLASSVGADAILIIARILTAEQIKEIYEAAEELGMDSLVEVHSREDLEKVFSV    169

query        111 AAGIARGLRLNPQRLGEWDVPKVERVMDRI-NGFMIHNNCENKDFGLFDRM    160
                 :::::::::::::::::::::::::::::: ::::::::::::::::::::
d1i4na_      170 IRPKIIGINTRDLDTFEIKKNVLWELLPLVPDDTVVVAESGIKDPRELKDL    220


d1tqja_ D-​ribulose-​5-​phosphate 3-​epimerase

Probability: 0.21 E-value:0.01

query         75 HAYSVAYGDNEIDEVVSHADKIIFN--SISQLERFADKAAG--IARGLRLNPQRLGEWDV    130
                 :::::::::::::::::::::::::  ::::::::::::::  ::::::::::    :::
d1tqja_       68 MIVEPEKYVEDFAKAGADIISVHVEHNASPHLHRTLCQIRELGKKAGAVLNPS----TPL    123

query        131 PKVERVMDRINGFMIHNNCENKDFGLFDRMLGEIEERFGALIARVDW-VSLG    181
                 ::::::::::::::::::::::::::::::::::::::::::::::: ::::
d1tqja_      124 DFLEYVLPVCDLILIMSVNPQSFIPEVLPKIRALRQMCDERGLDPWIEVDGG    175


d1nvma2 4-​hydroxy-​2-​oxovalerate aldolase DmpG,​ catalytic domain

Probability: 0.20 E-value:0.05

query         15 TRNMERIAHVREKSGAKAL--------------LALKCFATWSVFDLMRDYMDGTTSSSL     60
                 :::::::::::::::::::              :::::::::::::::::::::::::::
d1nvma2       28 LDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAGEISHAQIATL     87

query         61 --------FEVRLGRERFGKETHAYSVAYGDNEIDEVVSHADKIIF-----------NSI    101
                         ::::::::::::::::::::::::::::::::::::::           :::
d1nvma2       88 LLPGIGSVHDLKNAYQAGARVVRVATHCTEADVSKQHIEYARNLGMDTVGFLMMSHMIPA    147

query        102 SQLERFADKAAGIARGLRLNPQRLGEWDVP----KVERVMDRI-----NGFMIH    146
                 ::::::::::::::::::::::::::::::    :::::::::     ::::::
d1nvma2      148 EKLAEQGKLMESYGATCIYMADSGGAMSMNDIRDRMRAFKAVLKPETQVGMHAH    201


d1sgja_ Citrate lyase,​ beta subunit

Probability: 0.20 E-value:0.00

query         76 AYSVAYGDNEIDEVVSHADKIIFNSIS-------------------QLERFADKAAGIAR    116
                 :::::::::::::::::::::::::::                   ::::::::::::::
d1sgja_        9 LFAPGNRADLIAKLPRSAPDAVVIDLEDAVPGTAEAKAAARPVAHDAARDLIAAAPHLAV     68

query        117 GLRLNPQRLGEWDVPKVERVMDRINGFMIHNNCENKDFGLFDRMLGEI    164
                 :::::::::: :::::::::::::::::::::::::::::::::::::
d1sgja_       69 FVRVNALHSP-YFEDDLSVLTPELSGVVVPKLEMGAEARQVAQMLQER    115