HHsearch Result

Reference:
H. Cheng, BH. Kim, and N. Grishin (2008). Discrimination between distant homologs and structural analogs: lessons from manually constructed, reliable datasets. J. Mol. Biol. 377(4): 1265-1278
BH. Kim, H. Cheng, and N. Grishin (2009). HorA web server to infer homology between proteins using sequence and structural similarity. Nucleic Acids Res. 37(Web Server issue):W532-8
Comments and suggestions to: grishin@chop.swmed.edu


Query:T542_A.pdb A
Database: SCOP1.69 less than 40% identity downloaded from ASTRAL


Summary of Hits

Click the hit # to scoll down to alignments.

HIT
#
SCOPid PROTEIN SCOP SUPERFAMILY SCOP FOLD SCOP
CLASS
Probability E-value Raw Score
SCOP domains with score better than the threshold (Probability > 0.9)
1 d1uf5a_ N-​carbamoyl-​D-​aminoacid amidohydrolaseCarbon-​nitrogen hydrolaseCarbon-​nitrogen hydrolaseα+β1.000.00412.8
2 d1kqpa_ NH3-​dependent NAD+-​synthetaseAdenine nucleotide alpha hydrolases-​likeAdenine nucleotide alpha hydrolase-​likeα/β1.000.00403.3
3 d1j31a_ Hypothetical protein PH0642Carbon-​nitrogen hydrolaseCarbon-​nitrogen hydrolaseα+β1.000.00393.9
4 d1f89a_ hypothetical protein yl85Carbon-​nitrogen hydrolaseCarbon-​nitrogen hydrolaseα+β1.000.00399.0
5 d1emsa2 NIT-​FHIT fusion protein,​ N-​terminal domainCarbon-​nitrogen hydrolaseCarbon-​nitrogen hydrolaseα+β1.000.00383.8
6 d1gpma1 GMP synthetase,​ central domainAdenine nucleotide alpha hydrolases-​likeAdenine nucleotide alpha hydrolase-​likeα/β1.000.00186.1
7 d1vl2a1 Argininosuccinate synthetase,​ N-​terminal domainAdenine nucleotide alpha hydrolases-​likeAdenine nucleotide alpha hydrolase-​likeα/β0.960.0079.7
8 d1k92a1 Argininosuccinate synthetase,​ N-​terminal domainAdenine nucleotide alpha hydrolases-​likeAdenine nucleotide alpha hydrolase-​likeα/β0.960.0072.5
9 d1jgta1 beta-​Lactam synthetaseAdenine nucleotide alpha hydrolases-​likeAdenine nucleotide alpha hydrolase-​likeα/β0.960.0059.7
10 d1ni5a1 Putative cell cycle protein MesJ,​ N-​terminal domainAdenine nucleotide alpha hydrolases-​likeAdenine nucleotide alpha hydrolase-​likeα/β0.960.0061.6
11 d1sura_ Phosphoadenylyl sulphate (PAPS) reductaseAdenine nucleotide alpha hydrolases-​likeAdenine nucleotide alpha hydrolase-​likeα/β0.950.0051.8
12 d1q15a1 beta-​Lactam synthetaseAdenine nucleotide alpha hydrolases-​likeAdenine nucleotide alpha hydrolase-​likeα/β0.950.0060.2
13 d1ct9a1 Asparagine synthetase B,​ C-​terminal domainAdenine nucleotide alpha hydrolases-​likeAdenine nucleotide alpha hydrolase-​likeα/β0.950.0057.1
SCOP domains with score worse than the threshold (Probability ≤ 0.9)
14 d1ru8a_ Putative N-​type ATP pyrophosphatase PF0828Adenine nucleotide alpha hydrolases-​likeAdenine nucleotide alpha hydrolase-​likeα/β0.870.0041.2
15 d1s3la_ Putative phosphodiesterase MJ0936Metallo-​dependent phosphatasesMetallo-​dependent phosphatasesα+β0.340.0025.3
16 d1ne7a_ Glucosamine 6-​phosphate deaminase/​isomerase NagBNagB/​RpiA/​CoA transferase-​likeNagB/​RpiA/​CoA transferase-​likeα/β0.300.0117.4
17 d1hzpa1 Ketoacyl-​ACP synthase III (FabH)Thiolase-​likeThiolase-​likeα/β0.280.0022.5
18 d1odfa_ Hypothetical protein Ygr205WP-​loop containing nucleoside triphosphate hydrolasesP-​loop containing nucleoside triphosphate hydrolasesα/β0.260.0116.7
19 d1bu6o1 Glycerol kinaseActin-​like ATPase domainRibonuclease H-​like motifα/β0.260.0019.6
20 d1su1a_ Phosphodiesterase yfcEMetallo-​dependent phosphatasesMetallo-​dependent phosphatasesα+β0.250.0022.3
21 d1vlia2 Spore coat polysaccharide biosynthesis protein SpsE,​ N-​terminal domainAldolaseTIM beta/​alpha-​barrelα/β0.240.0018.6
22 d1tvza1 3-​hydroxy-​3-​methylglutaryl CoA synthase MvaSThiolase-​likeThiolase-​likeα/β0.220.0019.6
23 d1uf3a_ Hypothetical protein TT1561Metallo-​dependent phosphatasesMetallo-​dependent phosphatasesα+β0.210.0022.4
24 d1eucb1 Succinyl-​CoA synthetase,​ beta-​chain,​ C-​terminal domainSuccinyl-​CoA synthetase domainsFlavodoxin-​likeα/β0.210.0213.7
25 d1l2ta_ MJ0796P-​loop containing nucleoside triphosphate hydrolasesP-​loop containing nucleoside triphosphate hydrolasesα/β0.200.0213.7

d1uf5a_ N-​carbamoyl-​D-​aminoacid amidohydrolase

Probability: 1.00 E-value:0.00

query          1 SLQLRLALNQIDST--VGDIAGNAEAILRWTRHSAEQGAHLVAFPEMALTGYPVEDLALR     58
                 ::::::::::::::  ::::::::::::::::::::::::::::::::::::::::::::
d1uf5a_        1 TRQMILAVGQQGPIARAETREQVVVRLLDMLTKAASRGANFIVFPELALTTFFPRWHFTD     60

query         59 SSFVEASRT------ALRELAARLAEEGFGELPVLVGYLDRSESAQPKYGQPAGAPRNAA    112
                 :::::::::      ::::::::::::   ::::::::::::::      ::::::::::
d1uf5a_       61 EAELDSFYETEMPGPVVRPLFEKAAEL---GIGFNLGYAELVVE------GGVKRRFNTS    111

query        113 AVLHR-GRVALTFAKHHLPNYGVFD--------EFRYFVPGDT-MPIVRLHGVDIALAIC    162
                 ::::: :::::::::::::::::::        :::::::::: ::::::::::::::::
d1uf5a_      112 ILVDKSGKIVGKYRKIHLPGHKEYEAYRPFQHLEKRYFEPGDLGFPVYDVDAAKMGMFIA    171

query        163 EDLWQDGGRVPAARSAGAGLLLSVNASPYERDKDDT--------RLELVRKRAQEAGCTT    214
                 ::::::: ::::::::::::::::::::::::::::        ::::::::::::::::
d1uf5a_      172 NDRRWPE-AWRVMGLRGAEIICGGYNTPTHNPPVPQHDHLTSFHHLLSMQAGSYQNGAWS    230

query        215 AYLAMIGGQDELVFDGDSIVVDRDGEVVARAPQFSEGCVVLDLDLPAAEAEPPTGVVDDG    274
                 ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
d1uf5a_      231 AAAGKAGMEENCMLLGHSCIVAPTGEIVALTTTLEDEVITAAVDLDRCRELREHIFNFKQ    290

query        275 LRIDRLVISEEPLPAYEAELAGGYADRLDADEEVYSALV    313
                 ::::                            :::::::
d1uf5a_      291 HRQP----------------------------QHYGLIA    301


d1kqpa_ NH3-​dependent NAD+-​synthetase

Probability: 1.00 E-value:0.00

query        297 GYADRLDADEEVYSALVVGLRAYVAKNGFRSVLIGLSGGIDSALVAAIACDAL-------    349
                 :::::::::::: ::::::::::::::::::::::::::::::::::::::::       
d1kqpa_       11 HVKPSIDPKQEI-EDRVNFLKQYVKKTGAKGFVLGISGGQDSTLAGRLAQLAVESIREEG     69

query        350 GAQNVYGVSMPSKYSSDHSKGDAAELARRTGLNFR-TVSIEPMFDAYMASLGL------T    402
                 :::::::::::  :::::::::::::::::::::: :::::::::::::::::      :
d1kqpa_       70 GDAQFIAVRLP--HGTQQDEDDAQLALKFIKPDKSWKFDIKSTVSAFSDQYQQETGDQLT    127

query        403 GLAEENLQSRLRGTTLMAISNQEGHIVLAPGNKSELAVGYSTLYGDSVGAYGPIKDVYKT    462
                 ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
d1kqpa_      128 DFNKGNVKARTRMIAQYAIGGQEGLLVLGTDHAAEAVTGFFTKYGDGGADLLPLTGLTKR    187

query        463 SIFRLAEWRNRAAAERGQTPPIPEASI---TK-------PDYPVLDAILELYVDRDTGAD    512
                 ::::::::: :::::::::::::::::   ::       ::::::::::::         
d1kqpa_      188 QGRTLLKEL-GAPERLYLKEPTADLLDEKPQQSDETELGISYDEIDDYLEG---------    237

query        513 AIVAAGYDRELVVKTLRMVDTAEYKRRQYPPGT    545
                     :::::::::::::::::::::: ::::::
d1kqpa_      238 ----KEVSAKVSEALEKRYSMTEHKR-QVPASM    265


d1j31a_ Hypothetical protein PH0642

Probability: 1.00 E-value:0.00

query          4 LRLALNQIDSTVGDIAGNAEAILRWTRHSAEQGAHLVAFPEMALTGYPVEDLALRSSFVE     63
                 ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
d1j31a_        2 VKVGYIQMEPKILELDKNYSKAEKLIKEASKEGAKLVVLPELFDTGYNFESREEVFDVAQ     61

query         64 A-----SRTALRELAARLAEEGFGELPVLVGYLDRSESAQPKYGQPAGAPRNAAAVLHRG    118
                 :     :::::::::::      ::::::::::::::          :::::::::::::
d1j31a_       62 QIPEGETTTFLMELARE------LGLYIVAGTAEKSG----------NYLYNSAVVVGPR    105

query        119 RVALTFAKHHLPNYGVFDEFRYFVPGDT-MPIVRLHGVDIALAICEDLWQDGGRVPAARS    177
                 ::::::::::::    :::::::::::: ::::::::::::::::::::::: :::::::
d1j31a_      106 GYIGKYRKIHLF----YREKVFFEPGDLGFKVFDIGFAKVGVMICFDWFFPE-SARTLAL    160

query        178 AGAGLLLSVNASPYERDKDDTRLELVRKRAQEAGCTTAYLAMIGGQDELVFDGDSIVVDR    237
                 :::::::::::::     ::::::::::::::::::::::::::::::::::::::::::
d1j31a_      161 KGAEIIAHPANLV-----MPYAPRAMPIRALENRVYTITADRVGEERGLKFIGKSLIASP    215

query        238 DGEVVARAPQFSEGCVVLDLDLPAAEAEPP--TGVVDDGLRID    278
                 ::::::::::::::::::::::::::::::  :::::::::::
d1j31a_      216 KAEVLSIASETEEEIGVVEIDLNLARNKRLNDMNDIFKDRREE    258


d1f89a_ hypothetical protein yl85

Probability: 1.00 E-value:0.00

query          1 SLQLRLALNQIDSTVGDIAGNAEAILRWTRHSAEQ--GAHLVAFPEMALTGYPVEDLALR     58
                 :::::::::::::::::::::::::::::::::::  :::::::::::::::::::::::
d1f89a_        7 SQKIKVALVQLSGSSPDKMANLQRAATFIERAMKEQPDTKLVVLPECFNSPYSTDQFRKY     66

query         59 SSFVE-----ASRTALRELAARLAEEGFGELPVLVGYLDRSESAQPKYGQPAGAPRNAAA    113
                 :::::     ::::::::::::      ::::::::::::::       :::::::::::
d1f89a_       67 SEVINPKEPSTSVQFLSNLANK------FKIILVGGTIPELD-------PKTDKIYNTSI    113

query        114 VLH-RGRVALTFAKHHLPNYGVFDEFRYFVPGDTMPIVRLHGVDIALAICEDLWQDGGRV    172
                 ::: :::::::::::::     ::::::::::::::::::::::::::::::::::: ::
d1f89a_      114 IFNEDGKLIDKHRKVHL-----FHESETLSPGEKSTTIDTKYGKFGVGICYDMRFPE-LA    167

query        173 PAARSAGAGLLLSVNASPYERDKDDTRLELVRKRAQEAGCTTAYLAMIGG-QDELVFDGD    231
                 :::::::::::::::::::::: ::::::::::::::::::::::::::: :::::::::
d1f89a_      168 MLSARKGAFAMIYPSAFNTVTG-PLHWHLLARSRAVDNQVYVMLCSPARNLQSSYHAYGH    226

query        232 SIVVDRDGEVVARAPQFSEGCVVLDLDLPAAEAEPPTGVVDDGLRI    277
                 :::::::::::::::: :::::::::::::::::::::::::::::
d1f89a_      227 SIVVDPRGKIVAEAGE-GEEIIYAELDPEVIESFRQAVPLTKQRRF    271


d1emsa2 NIT-​FHIT fusion protein,​ N-​terminal domain

Probability: 1.00 E-value:0.00

query          1 SLQLRLALNQIDSTVGDIAGNAEAILRWTRHSAEQGAHLVAFPEMALTGYPVEDLALRSS     60
                 :::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::
d1emsa2        3 TGRHFIAVCQMTSD-NDLEKNFQAAKNMIERAGEKKCEMVFLPECFDFIGLNKNEQIDLA     61

query         61 FVE--ASRTALRELAARLAEEGFGELPVLVGYLDRSESAQPKYGQPAGAPRNAAAVL-HR    117
                 :::  ::::::::::::      :::::::::::::::      ::::::::::::: ::
d1emsa2       62 MATDCEYMEKYRELARK------HNIWLSLGGLHHKDP------SDAAHPWNTHLIIDSD    109

query        118 GRVALTFAKHHL-----PNYGVFDEFRYFVPGDTM-PIVRLHGVDIALAICEDLWQDGGR    171
                 ::::::::::::     :::::::::::::::::: :::::::::::::::::::::: :
d1emsa2      110 GVTRAEYNKLHLFDLEIPGKVRLMESEFSKAGTEMIPPVDTPIGRLGLSICYDVRFPE-L    168

query        172 VPAARSAGAGLLLSVNASPYERDKDDTRLELVRKRAQEAGCTTAYLAMIGG-QDELVFDG    230
                 ::::::::::::::::::::::: ::::::::::::::::::::::::::: ::::::::
d1emsa2      169 SLWNRKRGAQLLSFPSAFTLNTG-LAHWETLLRARAIENQCYVVAAAQTGAHNPKRQSYG    227

query        231 DSIVVDRDGEVVARAPQFSEGCVVLDLDLPAAEAEPPTGVVDDGL    275
                 ::::::::::::::::: :::::::::::::::::::::::::::
d1emsa2      228 HSMVVDPWGAVVAQCSE-RVDMCFAEIDLSYVDTLREMQPVFSHR    271


d1gpma1 GMP synthetase,​ central domain

Probability: 1.00 E-value:0.00

query        306 EEVYSALVVGLRAYVAKNGFRSVLIGLSGGIDSALVAAIACDALGAQNVYGVSMPSKYSS    365
                 :::::::::::::::::   ::::::::::::::::::::::::::::::::::::::::
d1gpma1        4 AKIIDDAVARIREQVGD---DKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNGLLRL     60

query        366 DHSKGDAAELARRTGLNFRTVSIEPMFDAYMASLGLTGLAEENLQSRLRGTTLMAISNQE    425
                 ::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::
d1gpma1       61 NEAEQVLDMFGDHFGLNIVHVPAEDRFLSALAGEN-DPEAKRKIIGRVFVEVFDEEALKL    119

query        426 GHI-VLAPGNKSELAVGYSTLYGDSVGAYGPIKDVYKTSIFRLAEWRNRAAAERGQTPPI    484
                 ::: ::::::::::::::::::::    ::::::::::::::::::: ::::::::::::
d1gpma1      120 EDVKWLAQGTIYPDVIESAAKMGL----VEPLKELFKDEVRKIGLEL-GLPYDMLYRHPF    174

query        485 P    485
                 :
d1gpma1      175 P    175


d1vl2a1 Argininosuccinate synthetase,​ N-​terminal domain

Probability: 0.96 E-value:0.00

query        326 RSVLIGLSGGIDSALVAAIACDALGAQNVYGVSMPSKYSSDHSKGDAAELARRTGL-NFR    384
                 :::::::::::::::::::::::  ::::::::::  ::::::::::::::::::: :::
d1vl2a1        2 EKVVLAYSGGLDTSVILKWLCEK--GFDVIAYVAN--VGQKDDFVAIKEKALKTGASKVY     57

query        385 TVSIEPMFDAYM--------ASLGLTGLAEENLQSRLRGTTLMAISNQEGHIVLAPG---    433
                 ::::::::::::        :::::::::::::::::::::::::::::::::::::   
d1vl2a1       58 VEDLRREFVTDYIFTALLGNAMYEGRYLLGTAIARPLIAKRQVEIAEKEGAQYVAHGATG    117

query        434 ---NKSELAVGYSTLYGDSVGAYGP-----IKDVYKTSIFRLAEWRN    472
                    ::::::::::::::: ::::::     :::::::::::::::::
d1vl2a1      118 KGNDQVRFELTYAALNPN-LKVISPWKDPEFLAKFKTDLINYAMEKG    163


d1k92a1 Argininosuccinate synthetase,​ N-​terminal domain

Probability: 0.96 E-value:0.00

query        326 RSVLIGLSGGIDSALVAAIACDALGAQNVYGVSMPSKYSSDHSKGDAAELARRTGL-NFR    384
                 :::::::::::::::::::::::  ::::::::::::::::::::::::::::::: :::
d1k92a1       11 QRIGIAFSGGLDTSAALLWMRQK--GAVPYAYTANLGQPDEEDYDAIPRRAMEYGAENAR     68

query        385 TVSIEPMFDAYMASLGLTGLAEENLQSR-----------LRGTTLMAISNQEGHIVLAPG    433
                 ::::::::::::::::::::::::::::           :::::::::::::::::::::
d1k92a1       69 LIDCRKQLVAEGIAAIQCGAFHNTTGGLTYFNTTPLGRAVTGTMLVAAMKEDGVNIWGDG    128

query        434 ------NKSELAVGYSTLYGDSVGAYGPIKDVY-------KTSIFRLAEWRN    472
                       ::::::::::::::: :::::::::::       ::::::::::::
d1k92a1      129 STYKGNDIERFYRYGLLTNAE-LQIYKPWLDTDFIDELGGRHEMSEFMIACG    179


d1jgta1 beta-​Lactam synthetase

Probability: 0.96 E-value:0.00

query        296 GGYADRLDADEEVYSALVVGLRAYVAK--NGFRSVLIGLSGGIDSALVAAIACDALGAQN    353
                 :::::::::::::::::::::::::::  ::::::::::::::::::::::::::  :::
d1jgta1        1 PGLSRRILPEGEAVAAVRAALEKAVAQRVTPGDTPLVVLSGGIDSSGVAACAHRA--AGE     58

query        354 VYGVSMPSKYSSDHSKGDAAELARRTGLNFRTVSI--EPMFDAYMASLGLTGL-AEENLQ    410
                 :::::::::::::  ::::::::::::::::::::  :::::::::::::::: ::::::
d1jgta1       59 LDTVSMGTDTSNE--FREARAVVDHLRTRHREITIPTTELLAQLPYAVWASESVDPDIIE    116

query        411 SRLRGTTLMAISNQEGHIVLAPGNKSELAVGY    442
                 ::::::::::::::::::::::::::::::::
d1jgta1      117 YLLPLTALYRALDGPERRILTGYGADIPLGGM    148


d1ni5a1 Putative cell cycle protein MesJ,​ N-​terminal domain

Probability: 0.96 E-value:0.00

query        326 RSVLIGLSGGIDSALVAAIACDALGAQ---NVYGVSMPSKYSS--DHSKGDAAELARRTG    380
                 :::::::::::::::::::::::::::   :::::::::::::  :::::::::::::::
d1ni5a1       14 RQILVAFSGGLDSTVLLHQLVQWRTENPGVALRAIHVHHGLSANADAWVTHCENVCQQWQ     73

query        381 LNFRTVSIEPMFDAYMASLGLTGLAEENLQSRLRGTTLMAISNQEGHIVLA---------    431
                 :::::::::         :::::::::::::::::::::::::::::::::         
d1ni5a1       74 VPLVVERVQ---------LAQEGLGIEAQARQARYQAFARTLLPGEVLVTAQHLDDQCET    124

query        432 ------PGNKSELAVGYSTLYGDSVGAYG-PIKDVYKTSIFRLAEWRN    472
                       ::::::::::::::::::::::: ::::::::::::::::::
d1ni5a1      125 FLLALKRGSGPAGLSAMAEVSEFAGTRLIRPLLARTRGELVQWARQYD    172


d1sura_ Phosphoadenylyl sulphate (PAPS) reductase

Probability: 0.95 E-value:0.00

query        305 DEEVYSALVVGLRAYVAKNGFRSVLIGLSGGIDSALVAAIACDALGAQNVYGVSMPSKYS    364
                 ::::::::::::::::::::::::::::::::::::::::::::  ::::::::::::::
d1sura_       24 NAELEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQI--RPDIPVILTDTGYL     81

query        365 SDHSKGDAAELARRTGLNFRTVSIEPMFDAYMASLG-----LTGLAEENLQSRLRGTTLM    419
                 ::::::::::::::::::::::::::::::::::::     :::::::::::::::::::
d1sura_       82 FPETYRFIDELTDKLKLNLKVYRATESAAWQEARYGKLWEQGVEGIEKYNDINKVEPMNR    141

query        420 AISNQEGHIVLAPGNKSELAVGYSTLYGDSVGAYG---PIKDVYKTSIFRLAEWRN    472
                 :::::::::::::::::::::::::::::::::::   ::::::::::::::::::
d1sura_      142 ALKELNAQTWFAGLRREQSGSRANLPVLAIQRGVFKVLPIIDWDNRTIYQYLQKHG    197


d1q15a1 beta-​Lactam synthetase

Probability: 0.95 E-value:0.00

query        295 AGGYADRLDADEEVYSALVVGLRAYVAKNGFRSVLIGL--SGGIDSALVAAIACDALGAQ    352
                 ::::::::::::::::::::::::::::::::::::::  ::::::::::::::::::::
d1q15a1        1 PASNQLLALPREPLLALIDRYLNAPLEDLAPRFDTVGIPLSGGLDSSLVTALASRHFKKL     60

query        353 NVYGVSMPSKYSSDHSKGDAAELARRTGLNF--RTVSIEPMFDAYMASLGLTGL-AEENL    409
                 ::::::::::    :::::::::::::::::  ::::::::::::::::::::: :::::
d1q15a1       61 NTYSIGTELS----NEFEFSQQVADALGTHHQMKILSETEVINGIIESIYYNEIFDGLSA    116

query        410 QSRLRGTTLMAISNQEGHIVLAPGNKSELAVGYS    443
                 ::::::::::::::::::::::::::::::::::
d1q15a1      117 EIQSGLFNVYRQAQGQVSCMLTGYGSDLLFGGIL    150


d1ct9a1 Asparagine synthetase B,​ C-​terminal domain

Probability: 0.95 E-value:0.00

query        296 GGYADRLDADEEVYSALVVGLRAYVAKNGFRSVLIGLSGGIDSALVAAIACDALGAQNVY    355
                 ::::::::::::::::::::::::::::  :::::::::::::::::::::::    :::
d1ct9a1        7 DAVKDNVTDKNELRQALEDSVKSHLMSD--VPYGVLLSGGLDSSIISAITKKY----ALH     60

query        356 GVSMPSKYSSDHSKGDAAELARRTGLNFRTVS--IEPMFDAYMASLGLTG-LAEENLQSR    412
                 :::::::::::  :::::::::::::::::::  :::::::::::::::: :::::::::
d1ct9a1       61 SFAVGLPGSPD--LKAAQEVANHLGTVHHEIHFTVQEGLDAIRDVIYHIETYDVTTIRAS    118

query        413 LRGTTLMAISNQEG-HIVLAPGNKSELAVGY    442
                 :::::::::::::: ::::::::::::::::
d1ct9a1      119 TPMYLMSRKIKAMGIKMVLSGEGSDEVFGGY    149


d1ru8a_ Putative N-​type ATP pyrophosphatase PF0828

Probability: 0.87 E-value:0.00

query        324 GFRSVLIGLSGGIDSALVAAIACDALGAQNVYGVSMPSKYSSDHS---KGDAAELARRTG    380
                 :::::::::::::::::::::::::::::::::::::::::::::   ::::::::::::
d1ru8a_        1 GLADVAVLYSGGKDSNYALYWAIKNRFSVKFLVTMVSENEESYMYTINANLTDLQARALG     60

query        381 LNFRTVSIEPMFDAYMASL    399
                 :::::::::::::::::::
d1ru8a_       61 IPLVKGFTQGEKEKEVEDL     79


d1s3la_ Putative phosphodiesterase MJ0936

Probability: 0.34 E-value:0.00

query          4 LRLALNQIDSTVGDIAGNAEAILRWTRHSAEQGAHLVAF     42
                 ::::::      :::::::::::::::::::::::::::
d1s3la_        1 MKIGIM------SDTHDHLPNIRKAIEIFNDENVETVIH     33


d1ne7a_ Glucosamine 6-​phosphate deaminase/​isomerase NagB

Probability: 0.30 E-value:0.01

query        303 DADEEVYSALVVGLRAYVAKNGFRS---VLIGLSGG-----IDSALVAAIACDALGAQNV    354
                 :::::::::::::::::::::::::   ::::::::     :::::::::::::::::::
d1ne7a_        7 EHYSQASEWAAKYIRNRIIQFNPGPEKYFTLGLPTGSTPLGCYKKLIEYYKNGDLSFKYV     66

query        355 YGVSMPSKY--SSDHSKGDAAELARRT    379
                 :::::::::  ::::::::::::::::
d1ne7a_       67 KTFNMDEYVGLPRDHPESYHSFMWNNF     93


d1hzpa1 Ketoacyl-​ACP synthase III (FabH)

Probability: 0.28 E-value:0.00

query        339 ALVAAIACDALGAQNVYGVSMPSKYSSDHSKGDAAELARRTGL-NFRTVSIEPMFDAYMA    397
                 ::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::
d1hzpa1       68 ACRRALSNAGLSAADIDGVIVTTNTHFLQTPPAAPMVAASLGAKGILGFDLSAGCAGFGY    127

query        398 SLGLTGLAEENLQSRLRGTTLMAISNQEGHIVLAPGNKSELA----VGYSTLYGDSVGAY    453
                 ::::::::::::::::             :::::::::::::    ::::::::::::::
d1hzpa1      128 ALGAAADMIRGGGAAT-------------MLVVGTEKLSPTIDMYDRGNCFIFADGAAAV    174


d1odfa_ Hypothetical protein Ygr205W

Probability: 0.26 E-value:0.01

query        305 DEEVYSALVVGLRAYVAKNGFRSVLIGLSGG-------IDSALVAAIACDALGAQNVYGV    357
                 :::::::::::::::::::::::::::::::       ::::::::::::::::::::::
d1odfa_        5 LDYTIEFLDKYIPEWFETGNKCPLFIFFSGPQGSGKSFTSIQIYNHLMEKYGGEKSIGYA     64

query        358 SMPSKYSSDHSKGD    371
                 ::::::::::::::
d1odfa_       65 SIDDFYLTHEDQLK     78


d1bu6o1 Glycerol kinase

Probability: 0.26 E-value:0.00

query        232 SIVVDRDGEVVARAPQFSEGCVV-----LDLDLPAAEAEPPTGVVDDGLRIDRLVISEEP    286
                 :::::::::::::::: ::::::     ::::                            
d1bu6o1       16 AVVMDHDANIISVSQR-EFEQIYPKPGWVEHD----------------------------     46

query        287 LPAYEAELAGGYADRLDADEEVYSALVVGLRAYVAKNGFRS---VLIGLSGGIDSAL    340
                                   :::::::::::::::::::::::   :::::::::::::
d1bu6o1       47 ------------------PMEIWATQSSTLVEVLTKADISSDQIAAIGITNQRETTI     85


d1su1a_ Phosphodiesterase yfcE

Probability: 0.25 E-value:0.00

query          4 LRLALNQIDSTVGDIAGNAEAILRWTRHSAEQGAHLVAF     42
                 ::::::      :::::::::::::::::::::::::::
d1su1a_        2 MKLMFA------SDIHGSLPATERVLELFAQSGAQWLVI     34


d1vlia2 Spore coat polysaccharide biosynthesis protein SpsE,​ N-​terminal domain

Probability: 0.24 E-value:0.00

query         19 AGNAEAILRWTRHSAEQGAHLVAFP----EMALTGYPVEDLALRSSFVEASRTALRELAA     74
                 :::::::::::::::::::::::::    :::::::::::::::::::::::::::::::
d1vlia2       27 DGKLDQAFALIDAAAEAGADAVKFQMFQADRMYQKDPDVSIFSLVQSMEMPAEWILPLLD     86

query         75 RLAE     78
                 ::::
d1vlia2       87 YCRE     90


d1tvza1 3-​hydroxy-​3-​methylglutaryl CoA synthase MvaS

Probability: 0.22 E-value:0.00

query        338 SALVAAIACDALGAQNVYGVSMPSKYSSDHSKGDAAELARRTGLN--FRTVSIEPMFDAY    395
                 :::::::::::::::::::::::::::::::::::::::::::::  :::::::::::::
d1tvza1       54 GANAAKDIITDEDKKKIGMVIVATESAVDAAKAAAVQIHNLLGIQPFARCFEMKEAXYAA    113

query        396 MASLGLTGLAEENLQSRLRGTTLMAISNQEGHIVLAPGNKS-ELAVGYSTLYGDSVGAY    453
                 :::::::             ::::::::::::::::::::: :::::::::::::::::
d1tvza1      114 TPAIQLA-------------KDYLATRPNEKVLVIATDTARYGLNSGGEPTQGAGAVAM    159


d1uf3a_ Hypothetical protein TT1561

Probability: 0.21 E-value:0.00

query         15 VGDIAGNAEAILRWTRHSAEQGAHLVAF     42
                 ::::::::::::::::::::::::::::
d1uf3a_       11 TSNPMGDLEALEKFVKLAPDTGADAIAL     38


d1eucb1 Succinyl-​CoA synthetase,​ beta-​chain,​ C-​terminal domain

Probability: 0.21 E-value:0.02

query        315 GLRAYVAKNGFRSVLIGLSGGIDSALVAAI----ACDALGAQNVYGVSMPSKYSSDHSKG    370
                 ::::::::::::::::::::::::::::::    ::::::::::::::::     :::::
d1eucb1       63 AFKLLTADPKVEAILVNIFGGIVNXAIIANGITKACRELELKVPLVVRLE-----GTNVH    117

query        371 DAAELARRTGLNFRTVS-IEPMFDAYMASLG    400
                 ::::::::::::::::: :::::::::::::
d1eucb1      118 EAQNILTNSGLPITSAVDLEDAAKKAVASVT    148


d1l2ta_ MJ0796

Probability: 0.20 E-value:0.02

query         23 EAILRWTRHSAEQGAHLVAFPEMALTGYPVEDLALRSSFVEASRTALRELAARLAEEGFG     82
                 ::::::::::::::::::::::::::        :::::::::::::::::::      :
d1l2ta_      150 QQQRVAIARALANNPPIILADQPTGA--------LDSKTGEKIMQLLKKLNEE------D    195

query         83 ELPVLVGYLDRSESAQPKYGQPAGAPRNAAAVLHRGRVAL    122
                 ::::::::::::::          ::::::::::::::::
d1l2ta_      196 GKTVVVVTHDINVA----------RFGERIIYLKDGEVER    225