Hit# SCOP Id Protein Name SCOP Superfamily SCOP Fold SCOP Class Comb score SVM score HH prob DALI Z FAST SN TM score SCOP domains with score better than threshold (Comb score > 2.0 OR SVM score > 0.6 OR HH prob > 0.9) 1 d1ui5a2 A-factor receptor homolog CprB Tetracyclin repressor-like, C-terminal domain Tetracyclin repressor-like, C-terminal domain All a 7.72 1.372 10.2 8.3 0.61 0.32 2 d1t56a2 Ethr repressor Tetracyclin repressor-like, C-terminal domain Tetracyclin repressor-like, C-terminal domain All a 7.41 1.356 9.2 8.6 0.56 0.73 3 d1vi0a2 Hypothetical transcriptional regulator YsiA Tetracyclin repressor-like, C-terminal domain Tetracyclin repressor-like, C-terminal domain All a 7.13 1.375 8.6 8.0 0.54 0.79 4 d1rkta2 Hypothetical transcriptional regulator YfiR Tetracyclin repressor-like, C-terminal domain Tetracyclin repressor-like, C-terminal domain All a 6.64 1.098 8.3 8.4 0.54 0.76 5 d1jt6a2 Multidrug binding protein QacR Tetracyclin repressor-like, C-terminal domain Tetracyclin repressor-like, C-terminal domain All a 6.64 1.100 9.1 9.1 0.55 0.01 6 d1t33a2 Putative transcriptional repressor YbiH Tetracyclin repressor-like, C-terminal domain Tetracyclin repressor-like, C-terminal domain All a 6.23 1.098 8.2 7.3 0.55 0.22 7 d1pb6a2 Hypothetical transcriptional regulator YcdC Tetracyclin repressor-like, C-terminal domain Tetracyclin repressor-like, C-terminal domain All a 5.30 1.019 5.2 6.1 0.49 0.84 8 d1sgma2 Putative transcriptional regulator YxaF Tetracyclin repressor-like, C-terminal domain Tetracyclin repressor-like, C-terminal domain All a 5.23 1.375 6.6 7.9 0.49 0.16 9 d2tcta2 Tetracyclin repressor (Tet-repressor, TetR) Tetracyclin repressor-like, C-terminal domain Tetracyclin repressor-like, C-terminal domain All a 3.75 0.789 6.8 1.8 0.47 0.06 10 d1f7ca_ Graf GTPase activation domain, GAP GTPase activation domain, GAP All a 2.822 -0.730 0.02 4.0 2.6 0.34 11 d1t11a1 Trigger factor, C-terminal domain TF C-terminus (Pfam 05698) TF C-terminus (Pfam 05698) All a 2.685 -0.933 0.08 3.6 2.6 0.38 12 d1kf6a1 Fumarate reductase Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain Spectrin repeat-like All a 2.683 -1.098 0.01 4.5 3.9 0.43 13 d1bg1a1 STAT3b STAT STAT-like All a 2.663 -0.539 0.41 5.6 2.8 0.46 14 d1neka1 Succinate dehydogenase Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain Spectrin repeat-like All a 2.615 -0.780 0.01 4.4 3.8 0.43 15 d1owaa_ Spectrin alpha chain Spectrin repeat Spectrin repeat-like All a 2.438 -0.475 0.08 6.4 2.9 0.40 16 d1s35a2 Spectrin beta chain Spectrin repeat Spectrin repeat-like All a 2.430 -1.208 0.06 5.7 3.7 0.42 17 d1j1ja_ Translin Translin alpha-alpha superhelix All a 2.396 -1.365 0.06 3.9 3.6 0.41 18 d1cuna1 Spectrin alpha chain Spectrin repeat Spectrin repeat-like All a 2.391 -1.236 0.05 6.3 3.0 0.44 19 d1n5ua1 Serum albumin Serum albumin-like Serum albumin-like All a 2.389 -1.162 0.01 4.9 2.7 0.41 20 d1n5ua2 Serum albumin Serum albumin-like Serum albumin-like All a 2.382 -0.344 0.01 5.0 2.5 0.40 21 d1jnra1 Adenylylsulfate reductase A subunit Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain Spectrin repeat-like All a 2.364 -1.493 0.01 4.4 4.0 0.44 22 d1iq0a1 Arginyl-tRNA synthetase (ArgRS) Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases All a 2.352 -0.843 0.03 5.1 2.0 0.43 23 d1a5ta1 delta prime subunit DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain All a 2.349 -0.771 0.03 4.2 3.0 0.42 24 d1n1ba2 (+)-bornyl diphosphate synthase Terpenoid synthases Terpenoid synthases All a 2.314 -0.756 0.02 4.7 1.7 0.51 25 d1s35a1 Spectrin beta chain Spectrin repeat Spectrin repeat-like All a 2.310 -1.119 0.14 5.8 3.3 0.41 26 d1hs7a_ Vam3p N-terminal domain t-snare proteins STAT-like All a 2.307 -0.482 0.03 6.0 4.8 0.43 27 d1fcya_ Retinoic acid receptor gamma (RAR-gamma) Nuclear receptor ligand-binding domain Nuclear receptor ligand-binding domain All a 2.261 -0.588 0.16 4.1 1.8 0.51 28 d1ivsa2 Valyl-tRNA synthetase (ValRS) Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases All a 2.238 -0.841 0.29 4.2 2.7 0.41 29 d1pbwa_ p85 alpha subunit RhoGAP domain GTPase activation domain, GAP GTPase activation domain, GAP All a 2.230 -0.975 0.02 3.1 3.2 0.45 30 d1fx8a_ Glycerol uptake facilitator protein GlpF Aquaporin-like Aquaporin-like mem 2.212 -0.890 0.01 3.0 3.1 0.50 31 d1ls1a1 Signal sequence recognition protein Ffh Domain of the SRP/SRP receptor G-proteins Four-helical up-and-down bundle All a 2.202 -1.046 0.04 3.8 3.4 0.31 32 d1fioa_ Sso1 t-snare proteins STAT-like All a 2.171 -0.245 0.32 4.5 3.4 0.44 33 d1hf8a1 Clathrin assembly lymphoid myeloid leukaemia protein, Calm GAT-like domain Spectrin repeat-like All a 2.161 0.537 0.03 5.5 3.2 0.40 34 d1quua2 alpha-actinin Spectrin repeat Spectrin repeat-like All a 2.127 -1.049 0.05 5.1 2.4 0.33 35 d1pq1a_ Apoptosis regulator Bcl-xL Bcl-2 inhibitors of programmed cell death Toxins' membrane translocation domains mem 2.121 -0.870 0.04 3.5 2.5 0.40 36 d1mija_ Homeo-prospero domain of Prospero protein Homeodomain-like DNA/RNA-binding 3-helical bundle All a 2.110 -1.321 0.01 3.1 2.3 0.40 37 d1sxja1 Replication factor C1 DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain All a 2.099 -1.173 0.01 2.8 2.2 0.40 38 d1hx1b_ BAG-family molecular chaperon regulator-1, BAG1 BAG domain Spectrin repeat-like All a 2.092 -0.169 0.02 6.2 2.7 0.39 39 d1m62a_ Silencer of death domains, Sodd (Bag4) BAG domain Spectrin repeat-like All a 2.09 0.664 5.5 3.2 0.36 0.01 40 d1nq7a_ Orphan nuclear receptor ROR-beta Nuclear receptor ligand-binding domain Nuclear receptor ligand-binding domain All a 2.083 -0.477 0.07 3.4 4.1 0.49 41 d1quua1 alpha-actinin Spectrin repeat Spectrin repeat-like All a 2.081 -1.138 0.21 5.0 2.5 0.42 42 d1hcia1 alpha-actinin Spectrin repeat Spectrin repeat-like All a 2.076 -1.076 0.05 4.9 3.0 0.34 43 d1kxpd2 Vitamin D binding protein Serum albumin-like Serum albumin-like All a 2.074 -1.157 0.01 3.9 2.1 0.42 44 d1gnwa1 Class phi GST Glutathione S-transferase (GST), C-terminal domain Glutathione S-transferase (GST), C-terminal domain All a 2.058 -1.348 0.08 4.4 2.7 0.33 45 d1us7b_ Hsp90 co-chaperone CDC37 Hsp90 co-chaperone CDC37 Hsp90 co-chaperone CDC37 All a 2.048 -1.547 0.03 2.8 3.6 0.40 46 d1j4na_ Aquaporin-1 Aquaporin-like Aquaporin-like mem 2.044 -0.799 0.01 2.7 3.0 0.48 47 d1oedc_ Acetylcholine receptor protein, delta chain Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore mem 2.020 -1.188 0.03 5.0 4.4 0.37 48 d1n5ua3 Serum albumin Serum albumin-like Serum albumin-like All a 2.009 -1.185 0.01 4.7 2.7 0.39 49 d1okta1 Pf GST Glutathione S-transferase (GST), C-terminal domain Glutathione S-transferase (GST), C-terminal domain All a 2.004 -1.453 0.03 4.1 2.5 0.39 50 d1aw9a1 Class phi GST Glutathione S-transferase (GST), C-terminal domain Glutathione S-transferase (GST), C-terminal domain All a 2.001 -1.286 0.07 4.5 2.3 0.39 51 d1cuna2 Spectrin alpha chain Spectrin repeat Spectrin repeat-like All a 1.99 0.671 5.8 2.3 0.42 0.06 52 d1ugoa_ BAG-family molecular chaperone regulator-5, BAG-5 BAG domain Spectrin repeat-like All a 1.75 0.671 4.3 2.5 0.39 0.02 53 d1lkia_ Leukemia inhibitory factor (LIF) 4-helical cytokines 4-helical cytokines All a 1.02 0.672 2.4 2.3 0.36 0.01 SCOP domains with score worse than threshold 54 d1vhma_ Hypothetical protein YebR GAF domain-like Profilin-like a+b 2.00 -0.478 0.03 3.5 2.9 0.35 55 d1v4aa2 Glutamine synthase adenylyltransferase GlnE, N-terminal domain Nucleotidyltransferase Nucleotidyltransferase a+b 1.98 -0.925 0.03 2.8 3.4 0.40 56 d1chua1 L-aspartate oxidase Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain Spectrin repeat-like All a 1.97 -1.275 0.01 4.7 2.2 0.40 57 d1oe8a1 Class alpha GST Glutathione S-transferase (GST), C-terminal domain Glutathione S-transferase (GST), C-terminal domain All a 1.96 -1.172 0.04 4.8 1.7 0.41 58 d1m5ya1 Porin chaperone SurA, peptide-binding domain Porin chaperone SurA, peptide-binding domain Porin chaperone SurA, peptide-binding domain All a 1.94 -0.621 0.15 3.1 2.1 0.33 59 d1kxpd1 Vitamin D binding protein Serum albumin-like Serum albumin-like All a 1.94 -1.364 0.01 3.8 2.9 0.37 60 d1hcia4 alpha-actinin Spectrin repeat Spectrin repeat-like All a 1.92 -0.607 0.10 5.1 2.6 0.40 61 d1f5na1 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain All a 1.92 -0.700 0.38 3.7 2.8 0.41 62 d1n46a_ Thyroid hormone receptor beta (TR-beta) Nuclear receptor ligand-binding domain Nuclear receptor ligand-binding domain All a 1.91 -0.368 0.12 3.7 1.6 0.49 63 d1rc2a_ Aquaporin Z Aquaporin-like Aquaporin-like mem 1.89 -0.987 0.02 3.0 2.6 0.48