Zinc finger CCCH-type antiviral protein 1(Zinc finger antiviral protein) (rZAP)
UniProt
Show FASTA Format
>gi|47117346|sp|Q8K3Y6.1|ZCCHV_RAT RecName: Full=Zinc finger CCCH-type antiviral protein 1; AltName: Full=Zinc finger antiviral protein; Short=ZAP; Short=rZAP
MADPGVCCFITKILCAHGGRMTLEELLGEIRLPEAQLYELLETAGPDRFVLLETGGQAGITRSVVATTRA
RVCRRKYCQRPCDSLHLCKLNLLGRCHYAQSQRNLCKYSHDVLSEQNFQILKNHELSGLNQEELACLLVQ
SDPFFLPEICKSYKGEGRKQTCGQPQPCERLHICEHFTRGNCSYLNCLRSHNLMDRKVLTIMREHGLSPD
VVQNIQDICNNKHARRNPPGTRAAHPHRRGGAHRDRSKSRDRFLHNSLEFLSPVVSPLGSGPPSPDVTSC
KDSLEDVSVDVTQKFKYLGTHDRAQLSPVSSKAAGVQGPSQMRASQEFSEDGNLDDIFSRNRSDSSSSRA
SAAKVAQRNEAVAMKMGMEVKGKKEAPDIDRVPFLNSYIDGVTMEKASVSGIPGKKFTANDLENLLLLND
TWKNVAKPQDLQTTGRITDSGQDKAFLQNKYGGNPVWASASTHNAPNGSSQIMDETPNVSKSSTSGFAIK
PAIAGGKEAVYSGVQSPRSQVLAVPGEATTPVQSNRLPQSPLSSSSHRAAASGSPGKNSTHTSVSPAIES
SRMTSDPDEYLLRYILNPLFRMDNHGPKEICQDHLYKGCQQSHCDRSHFHLPYRWQMFVYTTWRDFQDME
SIEQAYCDPHVELILIENHQINFQKMTCDSYPIRRLSTPSYEEKPLSAVFATKWIWYWKNEFNEYIQYGN
ESPGHTSSDINSAYLESFFQSCPRGVLPFQAGSQKYELSFQGMIQTNIASKTQRHVVRRPVFVSSNDVEQ
KRRGPE
Show Domain Info by CDD
Show Secondary Structure by PSIPRED
# PSIPRED HFORMAT (PSIPRED V3.2)
Conf: 984458999999996199834878897303999789999999829990999971887774
Pred: CCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCCC
AA: MADPGVCCFITKILCAHGGRMTLEELLGEIRLPEAQLYELLETAGPDRFVLLETGGQAGI
10 20 30 40 50 60
Conf: 115997122465565788899996456777858765468888887668542377011999
Pred: CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
AA: TRSVVATTRARVCRRKYCQRPCDSLHLCKLNLLGRCHYAQSQRNLCKYSHDVLSEQNFQI
70 80 90 100 110 120
Conf: 986258999998999999413997541123232144554468999999832112222268
Pred: HHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: LKNHELSGLNQEELACLLVQSDPFFLPEICKSYKGEGRKQTCGQPQPCERLHICEHFTRG
130 140 150 160 170 180
Conf: 788888888534698268999997599967786599996300000299998888999999
Pred: CCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
AA: NCSYLNCLRSHNLMDRKVLTIMREHGLSPDVVQNIQDICNNKHARRNPPGTRAAHPHRRG
190 200 210 220 230 240
Conf: 978888887654677885424776799999999999888889888744352012334698
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: GAHRDRSKSRDRFLHNSLEFLSPVVSPLGSGPPSPDVTSCKDSLEDVSVDVTQKFKYLGT
250 260 270 280 290 300
Conf: 888899989967778999997677755567899765457799999887521000126552
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: HDRAQLSPVSSKAAGVQGPSQMRASQEFSEDGNLDDIFSRNRSDSSSSRASAAKVAQRNE
310 320 330 340 350 360
Conf: 100136777689888999885457787888632246778899999776665453235788
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: AVAMKMGMEVKGKKEAPDIDRVPFLNSYIDGVTMEKASVSGIPGKKFTANDLENLLLLND
370 380 390 400 410 420
Conf: 889889899976656434789883212467899885579865679999887788999755
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: TWKNVAKPQDLQTTGRITDSGQDKAFLQNKYGGNPVWASASTHNAPNGSSQIMDETPNVS
430 440 450 460 470 480
Conf: 667777777876248977435798898976788999976667789899999999833457
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: KSSTSGFAIKPAIAGGKEAVYSGVQSPRSQVLAVPGEATTPVQSNRLPQSPLSSSSHRAA
490 500 510 520 530 540
Conf: 789999999887789885689878999642122334766545889986442010205899
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCC
AA: ASGSPGKNSTHTSVSPAIESSRMTSDPDEYLLRYILNPLFRMDNHGPKEICQDHLYKGCQ
550 560 570 580 590 600
Conf: 999798675677350884089321579708999861495652887113410013224789
Pred: CCCCCCCCCCCCCCCEEECCCCCEECCCHHHHHHHHCCCCCCEEEECCCCEECCCCCCCC
AA: QSHCDRSHFHLPYRWQMFVYTTWRDFQDMESIEQAYCDPHVELILIENHQINFQKMTCDS
610 620 630 640 650 660
Conf: 770224799989879998767407999935799816747899999988888689999883
Pred: CCEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCHHHHHHHHH
AA: YPIRRLSTPSYEEKPLSAVFATKWIWYWKNEFNEYIQYGNESPGHTSSDINSAYLESFFQ
670 680 690 700 710 720
Conf: 09984099974782899982742222045662430134777789899997840999
Pred: HCCCCCEEEEECCEEEEEECCCCEEECCCCCCEECCCCCCCCCCHHHHHHHHHCCC
AA: SCPRGVLPFQAGSQKYELSFQGMIQTNIASKTQRHVVRRPVFVSSNDVEQKRRGPE
730 740 750 760 770
Show Conservation Score by AL2CO
1 M 2.134
2 A 1.326
3 D 2.134
4 P 1.424
5 G 0.104
6 V 2.134
7 C 0.930
8 C 0.807
9 F 1.271
10 I 0.826
11 T 2.134
12 K 1.413
13 I 0.471
14 L 2.134
15 C 2.134
16 A 1.430
17 H 1.431
18 G 0.492
19 G 2.134
20 R 2.134
21 M 1.243
22 T 0.393
23 L 0.843
24 E 0.184
25 E 0.143
26 L 2.134
27 L 2.134
28 G -0.642
29 E 0.187
30 I 0.434
31 R -0.668
32 L 2.134
33 P 0.487
34 E 1.427
35 A -0.663
36 Q 1.405
37 L 1.294
38 Y -0.340
39 E 0.800
40 L 0.803
41 L 2.134
42 E -0.475
43 T -0.488
44 A 2.134
45 G 2.134
46 P 1.425
47 D 0.163
48 R 2.134
49 F 2.134
50 V 0.495
51 L 0.212
52 L 1.405
53 E 1.238
54 T -0.328
55 G -0.063
56 G -0.103
57 Q -0.501
58 A 0.101
59 G 0.926
60 I 0.182
61 T -0.137
62 R 0.488
63 S -0.310
64 V 2.134
65 V 1.295
66 A 2.134
67 T 0.767
68 T 2.134
69 R -0.069
70 A 1.230
71 R 2.134
72 V 1.427
73 C 2.134
74 R 2.134
75 R 2.134
76 K 1.424
77 Y 0.119
78 C 2.134
79 Q -0.781
80 R 0.055
81 P -0.495
82 C 2.134
83 D 0.400
84 S -0.099
85 L 2.134
86 H 2.134
87 L 2.134
88 C 2.134
89 K 2.134
90 L 1.428
91 N 2.134
92 L 1.428
93 L 0.543
94 G 0.476
95 R 1.428
96 C 2.134
97 H -0.094
98 Y 0.904
99 A 0.793
100 Q 0.199
101 S 0.767
102 Q 0.018
103 R 0.831
104 N -0.034
105 L 0.211
106 C 2.134
107 K 1.229
108 Y 1.248
109 S 0.842
110 H 1.229
111 D 0.362
112 V 0.883
113 L 1.062
114 S 1.229
115 E 0.777
116 Q -0.293
117 N 1.229
118 F -0.075
119 Q -0.059
120 I 0.704
121 L 0.731
122 K 0.011
123 N -1.020
124 H 0.183
125 E -0.279
126 L 1.390
127 S -0.043
128 G -0.042
129 L 2.134
130 N 0.727
131 Q 0.446
132 E 0.180
133 E 1.232
134 L 2.134
135 A -0.304
136 C 0.528
137 L 1.282
138 L 2.134
139 V -0.128
140 Q 0.194
141 S 0.719
142 D 1.229
143 P 2.134
144 F 1.526
145 F 0.842
146 L 0.508
147 P 0.778
148 E 0.985
149 I 0.541
150 C 0.178
151 K 0.513
152 S -0.438
153 Y 1.241
154 K 1.233
155 G 0.841
156 E 0.177
157 G 0.728
158 R 0.320
159 K -0.080
160 Q 0.147
161 T 0.170
162 C 1.524
163 G -0.704
164 Q -0.064
165 P -0.448
166 Q -0.601
167 P -0.597
168 C 1.524
169 E -0.550
170 R 0.118
171 L 1.524
172 H 2.134
173 I 0.751
174 C 2.134
175 E 0.740
176 H 0.839
177 F 1.230
178 T 0.522
179 R 0.455
180 G 2.134
181 N -0.286
182 C 1.524
183 S 0.081
184 Y 0.858
185 L -0.481
186 N 0.413
187 C 1.027
188 L -0.276
189 R 1.262
190 S 1.099
191 H 1.602
192 N 0.423
193 L 0.573
194 M 0.546
195 D 0.597
196 R 0.441
197 K -0.248
198 V 0.275
199 L 0.870
200 T -0.442
201 I -0.272
202 M 0.967
203 R 0.054
204 E -0.423
205 H 0.351
206 G 0.222
207 L 0.584
208 S -0.405
209 P -0.956
210 D -0.401
211 V -0.257
212 V -0.283
213 Q -0.581
214 N 0.598
215 I 0.195
216 Q 0.436
217 D -0.191
218 I 0.281
219 C -0.023
220 N -0.209
221 N 0.490
222 K -0.386
223 H 0.591
224 A -0.921
225 R -0.378
226 R -0.746
227 N -0.330
228 P -0.234
229 P -0.697
230 G -0.377
231 T -1.326
232 R 0.492
233 A -0.511
234 A -0.756
235 H -0.864
236 P -0.336
237 H -0.778
238 R 0.218
239 R 0.632
240 G -0.503
241 G -0.918
242 A -0.724
243 H -1.025
244 R -0.432
245 D -0.724
246 R 1.031
247 S -0.213
248 K -0.240
249 S 0.104
250 R 0.192
251 D 0.223
252 R 0.194
253 F -0.757
254 L -0.543
255 H -0.689
256 N -0.215
257 S -0.790
258 L -0.835
259 E -0.289
260 F -0.193
261 L -0.513
262 S -0.068
263 P -0.256
264 V -0.558
265 V -0.286
266 S -0.467
267 P -0.394
268 L -0.700
269 G -0.440
270 S -0.425
271 G -0.453
272 P -0.819
273 P -0.103
274 S -0.589
275 P 0.051
276 D -0.147
277 V -0.772
278 T -0.586
279 S -0.067
280 C -0.967
281 K -0.849
282 D -0.695
283 S -0.221
284 L -0.521
285 E -0.109
286 D -0.360
287 V -0.884
288 S -0.708
289 V -0.956
290 D 0.064
291 V 0.232
292 T -0.246
293 Q -0.593
294 K 0.063
295 F -0.216
296 K -0.777
297 Y -0.947
298 L 0.087
299 G 0.088
300 T 0.571
301 H -0.846
302 D -0.357
303 R -0.714
304 A -0.263
305 Q -0.325
306 L 0.094
307 S -0.543
308 P -0.557
309 V -0.788
310 S -0.256
311 S -0.512
312 K -0.759
313 A -0.327
314 A -0.775
315 G -1.004
316 V -0.763
317 Q -0.379
318 G -0.680
319 P -0.578
320 S -0.495
321 Q -0.574
322 M -0.828
323 R -0.712
324 A -0.670
325 S -0.515
326 Q -0.664
327 E -0.615
328 F -0.423
329 S -0.563
330 E -0.692
331 D -0.477
332 G -0.542
333 N -0.810
334 L -0.879
335 D -0.514
336 D -0.742
337 I -0.537
338 F -0.351
339 S -0.887
340 R -0.700
341 N -0.216
342 R -1.110
343 S -0.709
344 D -0.953
345 S -0.728
346 S -1.136
347 S -0.913
348 S -0.997
349 R -0.866
350 A -1.094
351 S -1.044
352 A -1.129
353 A -1.040
354 K -1.030
355 V -1.145
356 A -1.002
357 Q -0.903
358 R -0.890
359 N -1.005
360 E -1.085
361 A -1.096
362 V -1.075
363 A -0.475
364 M -1.283
365 K -1.032
366 M -0.992
367 G -0.939
368 M -0.683
369 E -0.880
370 V -1.366
371 K -0.847
372 G -0.482
373 K -0.658
374 K -0.779
375 E -0.752
376 A -1.074
377 P -0.616
378 D -0.853
379 I -0.894
380 D -0.952
381 R -0.988
382 V -0.752
383 P -0.262
384 F -0.982
385 L -0.865
386 N -0.791
387 S -0.577
388 Y -1.124
389 I -1.117
390 D -0.483
391 G -0.346
392 V -0.942
393 T -0.604
394 M -1.168
395 E -0.748
396 K -1.178
397 A -0.715
398 S -0.522
399 V -0.791
400 S -0.947
401 G -0.585
402 I -0.778
403 P -1.094
404 G -1.076
405 K -0.948
406 K -1.028
407 F -0.652
408 T -0.720
409 A -0.882
410 N -0.891
411 D -0.974
412 L -0.776
413 E -0.923
414 N -1.143
415 L -0.949
416 L -0.928
417 L -0.869
418 L -1.003
419 N -0.860
420 D -0.783
421 T -1.279
422 W -0.844
423 K -0.977
424 N -0.824
425 V -1.022
426 A -0.577
427 K -1.254
428 P -1.007
429 Q -1.100
430 D -1.055
431 L -0.753
432 Q -0.992
433 T -0.840
434 T -0.623
435 G -0.613
436 R -0.566
437 I -0.490
438 T -0.936
439 D -0.907
440 S -0.781
441 G -0.704
442 Q -1.076
443 D -0.839
444 K -1.006
445 A -0.589
446 F -0.519
447 L -0.742
448 Q -0.850
449 N -0.726
450 K -0.919
451 Y -0.861
452 G -1.122
453 G -0.923
454 N -1.063
455 P -1.223
456 V -1.067
457 W -0.593
458 A -0.966
459 S -1.009
460 A -0.816
461 S -0.784
462 T -0.907
463 H -0.569
464 N -1.360
465 A -1.273
466 P -0.903
467 N -1.037
468 G -0.633
469 S -1.034
470 S -0.872
471 Q -0.646
472 I -0.369
473 M -1.167
474 D -1.148
475 E -0.943
476 T -0.153
477 P -0.517
478 N -0.934
479 V -0.542
480 S -1.161
481 K -0.864
482 S -0.003
483 S -0.408
484 T -0.783
485 S -1.091
486 G -1.058
487 F -0.819
488 A -0.895
489 I -0.763
490 K -0.813
491 P -0.767
492 A -0.518
493 I -0.950
494 A -0.931
495 G -0.460
496 G -1.101
497 K -0.710
498 E -0.540
499 A -1.169
500 V -1.191
501 Y -1.060
502 S -0.862
503 G -0.383
504 V -0.843
505 Q -0.423
506 S -0.343
507 P -1.018
508 R -0.639
509 S -0.899
510 Q -1.040
511 V -0.531
512 L -0.816
513 A -0.953
514 V -1.061
515 P -0.554
516 G -0.775
517 E -0.952
518 A -1.036
519 T -0.294
520 T -0.376
521 P -0.907
522 V -1.152
523 Q -1.182
524 S -1.065
525 N -0.619
526 R -0.619
527 L -0.890
528 P -1.096
529 Q -1.079
530 S -1.388
531 P -1.124
532 L -1.172
533 S -0.687
534 S -0.564
535 S -0.468
536 S -1.111
537 H -0.936
538 R -0.342
539 A -0.722
540 A -1.073
541 A -0.958
542 S -1.003
543 G -0.891
544 S -0.826
545 P -1.204
546 G -1.084
547 K -1.073
548 N -0.951
549 S -1.155
550 T -0.677
551 H -1.274
552 T -1.111
553 S -0.988
554 V -1.083
555 S -0.794
556 P -0.797
557 A -0.671
558 I -1.394
559 E -1.036
560 S -1.223
561 S -0.485
562 R -0.868
563 M -1.234
564 T -1.232
565 S -1.132
566 D -1.099
567 P -1.045
568 D -1.153
569 E -1.399
570 Y -1.035
571 L -0.743
572 L -0.894
573 R -0.966
574 Y -0.437
575 I -0.576
576 L -0.976
577 N 0.341
578 P -0.568
579 L -0.512
580 F -0.090
581 R -0.826
582 M -0.241
583 D -0.454
584 N 0.219
585 H -0.735
586 G 0.303
587 P -0.025
588 K -0.257
589 E 0.139
590 I 2.134
591 C 2.134
592 Q 0.224
593 D 0.171
594 H 0.252
595 L 1.559
596 Y -0.962
597 K -0.217
598 G -0.089
599 C 2.134
600 Q -0.300
601 Q -0.857
602 S -0.631
603 H -0.480
604 C 2.134
605 D -0.591
606 R 0.267
607 S -0.422
608 H 2.134
609 F 1.559
610 H 0.097
611 L 2.134
612 P 2.134
613 Y 1.584
614 R 0.626
615 W 2.134
616 Q 2.134
617 M -0.043
618 F -0.554
619 V -0.752
620 Y -0.752
621 T -1.006
622 T -0.197
623 W 2.134
624 R -0.722
625 D 1.130
626 F 0.818
627 Q -0.488
628 D -0.733
629 M 1.589
630 E 1.543
631 S -0.939
632 I 0.816
633 E 2.134
634 Q 0.357
635 A 0.455
636 Y 1.293
637 C 1.498
638 D 0.914
639 P 2.134
640 H -0.259
641 V -0.084
642 E -1.040
643 L -0.643
644 I -0.271
645 L -0.291
646 I -0.222
647 E 0.008
648 N -0.415
649 H -0.423
650 Q -0.894
651 I 0.520
652 N 0.797
653 F 2.134
654 Q -0.171
655 K -0.520
656 M 2.134
657 T 0.320
658 C 0.539
659 D 0.015
660 S -0.826
661 Y -0.770
662 P 0.467
663 I 0.415
664 R 1.320
665 R 2.134
666 L 0.898
667 S 1.547
668 T 1.575
669 P 1.123
670 S 2.134
671 Y 0.015
672 E -0.613
673 E -0.544
674 K -1.088
675 P -0.447
676 L -0.879
677 S -0.561
678 A -0.468
679 V -0.539
680 F 1.261
681 A 0.223
682 T 2.134
683 K 0.229
684 W 2.134
685 I 0.482
686 W 2.134
687 Y 2.134
688 W 2.134
689 K 0.246
690 N 0.394
691 E 0.208
692 F -0.491
693 N 0.189
694 E -0.648
695 Y 1.320
696 I 0.439
697 Q 0.219
698 Y 2.134
699 G 2.134
700 N 0.198
701 E -0.212
702 S -1.025
703 P -0.743
704 G -0.285
705 H 0.225
706 T -0.840
707 S -0.624
708 S 0.327
709 D 0.101
710 I 0.596
711 N 0.369
712 S 2.134
713 A -0.508
714 Y 1.308
715 L 1.375
716 E 2.134
717 S 0.074
718 F 0.060
719 F 0.891
720 Q 0.018
721 S -0.690
722 C -0.257
723 P 0.579
724 R -0.503
725 G 0.971
726 V 0.906
727 L 0.462
728 P 0.099
729 F 2.134
730 Q 0.500
731 A 0.599
732 G 1.589
733 S -0.355
734 Q 0.175
735 K -0.252
736 Y 1.035
737 E 1.148
738 L 1.559
739 S 1.306
740 F 2.134
741 Q -0.526
742 G 0.533
743 M 2.134
744 I 0.638
745 Q 2.134
746 T 1.555
747 N 2.134
748 I 0.189
749 A -0.405
750 S 1.380
751 K 0.056
752 T 0.783
753 Q 1.130
754 R 0.815
755 H -0.438
756 V 1.346
757 V -0.070
758 R 2.134
759 R 2.134
760 P 2.134
761 V -0.557
762 F 1.103
763 V 0.070
764 S 1.026
765 S -0.730
766 N -0.812
767 D 0.034
768 V 0.406
769 E -0.373
770 Q -0.228
771 K -0.314
772 R 0.312
773 R -0.220
774 G -0.203
775 P -0.304
776 E 1.234
* gap fraction no less than 0.50; conservation set to M-S
M: mean; S: standard deviation
al2co - The parameters are:
Input alignment file - 113.paln
Output conservation - STDOUT
Weighting scheme - independent-count based
Conservation calculation method - entropy-based
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation - 0.50
10 20 30 40 50 60
MADPGVCCFI TKILCAHGGR MTLEELLGEI RLPEAQLYEL LETAGPDRFV LLETGGQAGI
70 80 90 100 110 120
TRSVVATTRA RVCRRKYCQR PCDSLHLCKL NLLGRCHYAQ SQRNLCKYSH DVLSEQNFQI
130 140 150 160 170 180
LKNHELSGLN QEELACLLVQ SDPFFLPEIC KSYKGEGRKQ TCGQPQPCER LHICEHFTRG
190 200 210 220 230 240
NCSYLNCLRS HNLMDRKVLT IMREHGLSPD VVQNIQDICN NKHARRNPPG TRAAHPHRRG
250 260 270 280 290 300
GAHRDRSKSR DRFLHNSLEF LSPVVSPLGS GPPSPDVTSC KDSLEDVSVD VTQKFKYLGT
310 320 330 340 350 360
HDRAQLSPVS SKAAGVQGPS QMRASQEFSE DGNLDDIFSR NRSDSSSSRA SAAKVAQRNE
370 380 390 400 410 420
AVAMKMGMEV KGKKEAPDID RVPFLNSYID GVTMEKASVS GIPGKKFTAN DLENLLLLND
430 440 450 460 470 480
TWKNVAKPQD LQTTGRITDS GQDKAFLQNK YGGNPVWASA STHNAPNGSS QIMDETPNVS
490 500 510 520 530 540
KSSTSGFAIK PAIAGGKEAV YSGVQSPRSQ VLAVPGEATT PVQSNRLPQS PLSSSSHRAA
550 560 570 580 590 600
ASGSPGKNST HTSVSPAIES SRMTSDPDEY LLRYILNPLF RMDNHGPKEI CQDHLYKGCQ
610 620 630 640 650 660
QSHCDRSHFH LPYRWQMFVY TTWRDFQDME SIEQAYCDPH VELILIENHQ INFQKMTCDS
670 680 690 700 710 720
YPIRRLSTPS YEEKPLSAVF ATKWIWYWKN EFNEYIQYGN ESPGHTSSDI NSAYLESFFQ
730 740 750 760 770
SCPRGVLPFQ AGSQKYELSF QGMIQTNIAS KTQRHVVRRP VFVSSNDVEQ KRRGPE
ZAP is an antiviral protein which specifically eliminates the viral mRNA in the cytoplasm. In the N-terminus of ZAP, there are four CCCH-type zinc finger motifs, which has been shown to bind to the AU-rich element in mRNAs in similar systems. ZAP was shown to shuttle between the cytoplasm and the nucleus with the help of two NLSs and one NES. The putative NES is located between 284-291.
[1]. "ZAP is a CRM1-dependent nucleocytoplasmic shuttling protein."
Liu L, Chen G, Ji X, Gao G (2004)
Biochem Biophys Res Commun,
321:517-23
PubMed
Accurate identification of NESs is difficult because many sequences in the genome match the NES consensus.
Therefore, some published NESs may be mistakenly identified. Please help us improve the accuracy of NESdb
by providing either a positive or negative flag for the NES in this entry. Supporting comments are required to process the flag.