Thyroid receptor-interacting protein 6
UniProt
Show FASTA Format
>gi|81907771|sp|Q9Z1Y4.1|TRIP6_MOUSE RecName: Full=Thyroid receptor-interacting protein 6; Short=TR-interacting protein 6; Short=TRIP-6; AltName: Full=Zyxin-related protein 1; Short=ZRP-1
MSGPTWLPPKQPEPSRLPQGRSLPRGALGPPTAHGATLQPHPRVNFCPLPPEHCYQPPGVPEDRGPTWVG
SHGTPQRLQGLPPDRGIIRPGSLDAEIDSLTSMLADLDGGRSHAPRRPDRQAFEAPPPHAYRGGSLKPSG
GAVPTPMLPASHYGGPTPASYATASTPAGPAFPVQVKVAQPVRGCGLPRRGASQASGPLPGPHFPLTGRG
EVWGAGYRSHREPGPGVPEGPSGVHIPAGGGRGGGHEPQGPLGQPPEEELERLTKKLVHDMSHPPSGEYF
GRCGGCGEDVVGDGAGVVALDRVFHIGCFVCSTCRAQLRGQHFYAVERRAYCESCYVATLEKCSTCSEPI
LDRILRAMGKAYHPGCFTCVVCHRGLDGIPFTVDATSQIHCIEDFHRKFAPRCSVCGGAIMPEPGQEETV
RIVALDRSFHIGCYKCEECGLLLSSEGECQGCYPLDGHILCKACSAWRIQELSATVTTDC
Show Domain Info by CDD
Show Secondary Structure by PSIPRED
# PSIPRED HFORMAT (PSIPRED V3.2)
Conf: 989999999999999999998789989999989899889999998999999999999999
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: MSGPTWLPPKQPEPSRLPQGRSLPRGALGPPTAHGATLQPHPRVNFCPLPPEHCYQPPGV
10 20 30 40 50 60
Conf: 999999999999999898899999999999877656565211124779999999999998
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: PEDRGPTWVGSHGTPQRLQGLPPDRGIIRPGSLDAEIDSLTSMLADLDGGRSHAPRRPDR
70 80 90 100 110 120
Conf: 997799999889999899999999989999999999999999988899999998666779
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: QAFEAPPPHAYRGGSLKPSGGAVPTPMLPASHYGGPTPASYATASTPAGPAFPVQVKVAQ
130 140 150 160 170 180
Conf: 987789999999999999999999998998778988789999999999999989999999
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: PVRGCGLPRRGASQASGPLPGPHFPLTGRGEVWGAGYRSHREPGPGVPEGPSGVHIPAGG
190 200 210 220 230 240
Conf: 999999999999999037889979988750899999986322466798865785246403
Pred: CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHC
AA: GRGGGHEPQGPLGQPPEEELERLTKKLVHDMSHPPSGEYFGRCGGCGEDVVGDGAGVVAL
250 260 270 280 290 300
Conf: 452334774454223434575221148942485677987987401892589999998099
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCC
AA: DRVFHIGCFVCSTCRAQLRGQHFYAVERRAYCESCYVATLEKCSTCSEPILDRILRAMGK
310 320 330 340 350 360
Conf: 778788432335678799410122899932234600002877567799987999985458
Pred: CCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCEE
AA: AYHPGCFTCVVCHRGLDGIPFTVDATSQIHCIEDFHRKFAPRCSVCGGAIMPEPGQEETV
370 380 390 400 410 420
Conf: 999727887667534588898888779999524589950346100789975112445889
Pred: EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCC
AA: RIVALDRSFHIGCYKCEECGLLLSSEGECQGCYPLDGHILCKACSAWRIQELSATVTTDC
430 440 450 460 470 480
Conf:
Pred:
AA:
Show Conservation Score by AL2CO
1 M -1.000 *
2 S -1.000 *
3 G -1.000 *
4 P -1.000 *
5 T -1.000 *
6 W -1.000 *
7 L -1.000 *
8 P -1.000 *
9 P -1.000 *
10 K -1.000 *
11 Q -1.000 *
12 P -1.000 *
13 E -1.000 *
14 P -1.000 *
15 S -1.000 *
16 R -1.000 *
17 L -1.000 *
18 P -1.000 *
19 Q -1.000 *
20 G -1.000 *
21 R -1.000 *
22 S -1.000 *
23 L -1.000 *
24 P -1.000 *
25 R -1.000 *
26 G -1.000 *
27 A -1.000 *
28 L -1.000 *
29 G -1.000 *
30 P -1.000 *
31 P -1.000 *
32 T -1.000 *
33 A -1.000 *
34 H -1.000 *
35 G -1.000 *
36 A -1.000 *
37 T -1.000 *
38 L -1.000 *
39 Q -1.000 *
40 P -1.000 *
41 H -1.000 *
42 P -1.000 *
43 R -1.000 *
44 V -1.000 *
45 N -1.000 *
46 F -1.000 *
47 C -1.000 *
48 P -1.000 *
49 L -1.000 *
50 P -1.000 *
51 P -1.000 *
52 E -1.000 *
53 H -1.000 *
54 C -1.000 *
55 Y -1.000 *
56 Q -0.431
57 P -0.178
58 P -0.595
59 G -0.504
60 V -0.527
61 P -0.489
62 E -0.576
63 D -0.552
64 R -0.698
65 G -0.330
66 P -0.612
67 T -0.359
68 W -0.588
69 V -0.369
70 G -0.308
71 S -0.567
72 H -0.810
73 G -0.540
74 T -0.526
75 P -0.387
76 Q -0.471
77 R -0.666
78 L -0.659
79 Q -0.659
80 G -0.361
81 L -0.758
82 P -0.504
83 P -0.421
84 D -0.725
85 R -0.531
86 G -0.415
87 I -0.706
88 I -0.576
89 R -0.669
90 P -0.363
91 G -0.067
92 S -0.429
93 L -0.493
94 D -0.409
95 A -0.504
96 E -0.351
97 I -0.557
98 D -0.362
99 S -0.117
100 L -0.261
101 T -0.326
102 S -0.516
103 M -0.604
104 L -0.611
105 A -0.154
106 D -0.034
107 L -0.416
108 D -0.322
109 G -0.408
110 G -0.238
111 R -0.452
112 S -0.486
113 H -0.766
114 A -0.745
115 P -0.667
116 R -0.659
117 R -0.583
118 P -0.501
119 D -0.525
120 R -0.675
121 Q -0.636
122 A -0.488
123 F -0.721
124 E -0.571
125 A -0.721
126 P -0.526
127 P -0.514
128 P -0.634
129 H -0.452
130 A -0.475
131 Y -0.649
132 R -0.507
133 G -0.593
134 G -0.463
135 S -0.656
136 L -0.871
137 K -0.669
138 P -0.357
139 S -0.672
140 G -0.504
141 G -0.554
142 A -0.458
143 V -0.674
144 P -0.701
145 T -0.641
146 P -0.711
147 M -0.755
148 L -0.687
149 P -0.421
150 A -0.465
151 S -0.530
152 H -0.507
153 Y -0.896
154 G -0.657
155 G -0.526
156 P -0.828
157 T -0.756
158 P -0.507
159 A -0.731
160 S -0.511
161 Y -0.757
162 A -0.623
163 T -0.672
164 A -0.652
165 S -0.821
166 T -0.649
167 P -0.596
168 A -0.536
169 G -0.551
170 P -0.663
171 A -0.595
172 F -0.865
173 P -0.058
174 V -0.604
175 Q -0.758
176 V -0.674
177 K -0.689
178 V -0.748
179 A -0.603
180 Q -0.754
181 P -0.745
182 V -0.860
183 R -0.758
184 G -0.703
185 C -0.916
186 G -0.446
187 L -0.713
188 P -0.739
189 R -0.609
190 R -0.553
191 G -0.698
192 A -0.805
193 S -0.809
194 Q -0.684
195 A -0.552
196 S -0.592
197 G -0.603
198 P -0.715
199 L -0.779
200 P -0.666
201 G -0.702
202 P -0.659
203 H -0.822
204 F -0.661
205 P -0.412
206 L -0.666
207 T -0.617
208 G -0.660
209 R -0.778
210 G -0.782
211 E -0.435
212 V -0.759
213 W -0.666
214 G -0.498
215 A -0.743
216 G -0.620
217 Y -0.796
218 R -0.672
219 S -0.531
220 H -0.661
221 R -0.799
222 E -0.594
223 P -0.795
224 G -0.593
225 P -0.718
226 G -0.950
227 V -0.777
228 P -0.725
229 E -0.592
230 G -0.630
231 P -0.879
232 S -0.666
233 G -0.737
234 V -0.935
235 H -0.755
236 I -0.794
237 P -0.775
238 A -0.761
239 G -0.776
240 G -0.685
241 G -0.792
242 R -0.789
243 G -0.706
244 G -0.747
245 G -0.635
246 H -0.644
247 E -0.641
248 P -0.555
249 Q -0.657
250 G -0.750
251 P -0.757
252 L -0.536
253 G -0.858
254 Q -0.812
255 P -0.345
256 P -0.653
257 E -0.825
258 E -0.711
259 E -0.334
260 L -0.229
261 E 0.251
262 R -0.626
263 L -0.339
264 T -0.220
265 K -0.540
266 K -0.817
267 L -0.559
268 V -0.451
269 H -0.459
270 D -0.233
271 M -0.457
272 S -0.359
273 H -0.837
274 P -0.551
275 P -0.738
276 S -0.792
277 G -0.608
278 E -0.498
279 Y -0.455
280 F -0.535
281 G -0.052
282 R -0.591
283 C 1.852
284 G -0.173
285 G -0.558
286 C 2.022
287 G -0.121
288 E -0.211
289 D 0.096
290 V 0.900
291 V -0.510
292 G 0.448
293 D -0.126
294 G -0.129
295 A -0.282
296 G 0.066
297 V 0.419
298 V -0.050
299 A 2.197
300 L 0.825
301 D 0.645
302 R -0.067
303 V 0.173
304 F 1.313
305 H 2.461
306 I 0.247
307 G -0.279
308 C 1.669
309 F 2.625
310 V 0.121
311 C 3.490
312 S -0.743
313 T -0.453
314 C 2.951
315 R -0.231
316 A -0.553
317 Q -0.220
318 L 1.268
319 R 0.510
320 G -0.071
321 Q -0.167
322 H -0.378
323 F 1.772
324 Y 0.807
325 A -0.506
326 V -0.174
327 E 0.090
328 R 0.746
329 R -0.453
330 A 0.551
331 Y 0.371
332 C 3.054
333 E 0.747
334 S -0.599
335 C 1.220
336 Y 1.440
337 V -0.521
338 A -0.104
339 T -0.116
340 L 0.561
341 E 0.630
342 K -0.383
343 C 3.020
344 S -0.219
345 T -0.544
346 C 3.490
347 S -0.552
348 E -0.144
349 P 0.319
350 I 2.223
351 L 0.340
352 D 1.059
353 R 0.288
354 I 0.106
355 L 1.313
356 R 0.234
357 A 3.002
358 M 1.233
359 G 0.698
360 K 0.273
361 A -0.063
362 Y 1.801
363 H 3.490
364 P 0.632
365 G -0.185
366 C 1.980
367 F 2.664
368 T -0.148
369 C 3.490
370 V 0.102
371 V -0.303
372 C 3.490
373 H -0.409
374 R -0.493
375 G -0.092
376 L 1.641
377 D 0.105
378 G 0.073
379 I -0.148
380 P -0.063
381 F 2.148
382 T 0.528
383 V 0.204
384 D 0.943
385 A -0.841
386 T -0.454
387 S 0.507
388 Q 0.156
389 I 1.025
390 H 1.285
391 C 3.006
392 I 0.504
393 E -0.243
394 D 1.824
395 F 1.607
396 H 0.160
397 R -0.081
398 K -0.119
399 F 0.920
400 A 1.360
401 P 0.918
402 R 0.430
403 C 2.989
404 S 0.063
405 V 0.094
406 C 2.981
407 G -0.556
408 G -0.290
409 A 1.145
410 I 2.365
411 M 0.579
412 P 1.235
413 E -0.321
414 P 0.030
415 G 1.672
416 Q 0.258
417 E 0.612
418 E 1.303
419 T 1.219
420 V 0.545
421 R 0.989
422 I 1.470
423 V 0.525
424 A 1.945
425 L 1.700
426 D 0.214
427 R 0.076
428 S 0.246
429 F 1.809
430 H 3.490
431 I 0.173
432 G -0.386
433 C 2.201
434 Y 2.423
435 K 0.253
436 C 3.490
437 E 0.506
438 E 0.269
439 C 2.581
440 G -0.377
441 L -0.579
442 L -0.036
443 L 2.101
444 S -0.054
445 S -0.040
446 E 0.921
447 G -0.017
448 E 0.088
449 C 0.385
450 Q -0.236
451 G -0.081
452 C 1.417
453 Y 2.444
454 P 0.566
455 L -0.093
456 D -0.167
457 G -0.099
458 H 0.640
459 I 0.792
460 L 0.715
461 C 3.490
462 K -0.050
463 A -0.452
464 C 2.653
465 S 0.460
466 A -0.223
467 W -0.382
468 R 0.619
469 I 0.342
470 Q 0.424
471 E -0.478
472 L -1.000 *
473 S -1.000 *
474 A -1.000 *
475 T -1.000 *
476 V -1.000 *
477 T -1.000 *
478 T -1.000 *
479 D -1.000 *
480 C -1.000 *
* gap fraction no less than 0.50; conservation set to M-S
M: mean; S: standard deviation
al2co - The parameters are:
Input alignment file - 137.paln
Output conservation - STDOUT
Weighting scheme - independent-count based
Conservation calculation method - entropy-based
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation - 0.50
10 20 30 40 50 60
MSGPTWLPPK QPEPSRLPQG RSLPRGALGP PTAHGATLQP HPRVNFCPLP PEHCYQPPGV
70 80 90 100 110 120
PEDRGPTWVG SHGTPQRLQG LPPDRGIIRP GSLDAEIDSL TSMLADLDGG RSHAPRRPDR
130 140 150 160 170 180
QAFEAPPPHA YRGGSLKPSG GAVPTPMLPA SHYGGPTPAS YATASTPAGP AFPVQVKVAQ
190 200 210 220 230 240
PVRGCGLPRR GASQASGPLP GPHFPLTGRG EVWGAGYRSH REPGPGVPEG PSGVHIPAGG
250 260 270 280 290 300
GRGGGHEPQG PLGQPPEEEL ERLTKKLVHD MSHPPSGEYF GRCGGCGEDV VGDGAGVVAL
310 320 330 340 350 360
DRVFHIGCFV CSTCRAQLRG QHFYAVERRA YCESCYVATL EKCSTCSEPI LDRILRAMGK
370 380 390 400 410 420
AYHPGCFTCV VCHRGLDGIP FTVDATSQIH CIEDFHRKFA PRCSVCGGAI MPEPGQEETV
430 440 450 460 470 480
RIVALDRSFH IGCYKCEECG LLLSSEGECQ GCYPLDGHIL CKACSAWRIQ ELSATVTTDC
Trip6 is a member of LIM domain proteins, which also includes Zyxin, paxillin, Hic5 and LLP. Wang et al. identified a NES at aa 100-107 and NLSs at aa280-480 and N-terminus half, respectively.
[1]. "LIM domain protein Trip6 has a conserved nuclear export signal, nuclear targeting sequences, and multiple transactivation domains."
Wang Y, Gilmore TD (2001)
Biochim Biophys Acta,
1538:260-72
PubMed
Accurate identification of NESs is difficult because many sequences in the genome match the NES consensus.
Therefore, some published NESs may be mistakenly identified. Please help us improve the accuracy of NESdb
by providing either a positive or negative flag for the NES in this entry. Supporting comments are required to process the flag.