Show FASTA Format
>gi|284172479|ref|NP_443178.2| nostrin isoform 1 [Homo sapiens]
MKSTADLHQKLGKAIELEAIKPTYQVLNVQEKKRKSLDNEVEKTANLVISNWNQQIKAKKKLMVSTKKHE
ALFQLVESSKQSMTEKEKRKLLNKLTKSTEKLEKEDENYYQKNMAGYSTRLKWENTLENCYQSILELEKE
RIQLLCNNLNQYSQHISLFGQTLTTCHTQIHCAISKIDIEKDIQAVMEETAILSTENKSEFLLTDYFEED
PNSAMDKERRKSLLKPKLLRLQRDIEKASKDKEGLERMLKTYSSTSSFSDAKSQKDTAALMDENNLKLDL
LEANSYKLSSMLAELEQRPQPSHPCSNSIFRWREKEHTHSYVKISRPFLMKRLENIVSKASSGGQSNPGS
STPAPGAAQLSSRLCKALYSFQARQDDELNLEKGDIVIIHEKKEGGWWFGSLNGKKGHFPAAYVEELPSN
AGNTATKA
Show Domain Info by CDD
Show Secondary Structure by PSIPRED
# PSIPRED HFORMAT (PSIPRED V3.2)
Conf: 944479999997889998622047888876543211226889887788763679999877
Pred: CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AA: MKSTADLHQKLGKAIELEAIKPTYQVLNVQEKKRKSLDNEVEKTANLVISNWNQQIKAKK
10 20 30 40 50 60
Conf: 787766766888987872034678688888887655567777543288999868677776
Pred: HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AA: KLMVSTKKHEALFQLVESSKQSMTEKEKRKLLNKLTKSTEKLEKEDENYYQKNMAGYSTR
70 80 90 100 110 120
Conf: 736987999999899999999999999999999999856176999998784665307868
Pred: HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
AA: LKWENTLENCYQSILELEKERIQLLCNNLNQYSQHISLFGQTLTTCHTQIHCAISKIDIE
130 140 150 160 170 180
Conf: 879999999422687787631115554359867489889841113557888899998741
Pred: HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AA: KDIQAVMEETAILSTENKSEFLLTDYFEEDPNSAMDKERRKSLLKPKLLRLQRDIEKASK
190 200 210 220 230 240
Conf: 057899999997225887525647979999775444887899999998855554239999
Pred: HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AA: DKEGLERMLKTYSSTSSFSDAKSQKDTAALMDENNLKLDLLEANSYKLSSMLAELEQRPQ
250 260 270 280 290 300
Conf: 998897510010123466543244510111000110015789999999999999986545
Pred: CCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
AA: PSHPCSNSIFRWREKEHTHSYVKISRPFLMKRLENIVSKASSGGQSNPGSSTPAPGAAQL
310 320 330 340 350 360
Conf: 644421301345577575445689878982202597000421894011236762331699
Pred: CCCCCEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCCCCCCCEEECCCC
AA: SSRLCKALYSFQARQDDELNLEKGDIVIIHEKKEGGWWFGSLNGKKGHFPAAYVEELPSN
370 380 390 400 410 420
Conf: 99998889
Pred: CCCCCCCC
AA: AGNTATKA
Show Conservation Score by AL2CO
1 M -1.000 *
2 K -1.000 *
3 S -1.000 *
4 T -1.000 *
5 A -1.000 *
6 D -1.000 *
7 L -1.000 *
8 H -1.000 *
9 Q -1.000 *
10 K -1.000 *
11 L -1.000 *
12 G -1.000 *
13 K -1.000 *
14 A -1.000 *
15 I -1.000 *
16 E -1.000 *
17 L -1.000 *
18 E -1.000 *
19 A -1.000 *
20 I -1.000 *
21 K -1.000 *
22 P -1.000 *
23 T -1.000 *
24 Y -1.000 *
25 Q -1.000 *
26 V -1.000 *
27 L -1.000 *
28 N -1.000 *
29 V -1.000 *
30 Q -1.000 *
31 E -1.000 *
32 K 1.131
33 K 0.304
34 R 1.124
35 K 1.992
36 S 0.112
37 L 0.080
38 D 1.233
39 N -0.595
40 E -0.130
41 V 0.429
42 E 0.885
43 K 1.370
44 T -0.047
45 A 0.146
46 N 0.758
47 L -0.707
48 V -0.228
49 I -0.675
50 S 0.438
51 N 0.188
52 W -0.213
53 N 0.060
54 Q 0.238
55 Q 0.074
56 I -0.162
57 K 1.007
58 A -0.288
59 K 0.950
60 K 0.813
61 K 0.339
62 L 0.022
63 M 0.293
64 V -0.180
65 S -0.317
66 T 0.526
67 K 1.855
68 K 0.362
69 H -0.163
70 E 1.015
71 A 0.537
72 L 0.432
73 F -0.544
74 Q -0.325
75 L -0.523
76 V -0.362
77 E -0.019
78 S 0.180
79 S -0.187
80 K 0.145
81 Q -0.214
82 S -0.448
83 M -0.396
84 T -0.267
85 E -0.171
86 K 0.012
87 E 0.780
88 K -0.309
89 R 0.159
90 K 1.064
91 L 0.498
92 L -0.301
93 N -0.204
94 K 0.589
95 L -0.181
96 T 0.439
97 K 0.224
98 S -0.380
99 T -0.358
100 E 0.443
101 K 0.090
102 L 0.080
103 E -0.346
104 K 0.444
105 E 0.035
106 D 0.184
107 E -0.468
108 N 0.592
109 Y 0.540
110 Y -0.388
111 Q 0.141
112 K -0.469
113 N -0.040
114 M -0.534
115 A -0.004
116 G -0.003
117 Y -0.233
118 S 0.133
119 T -0.276
120 R 1.108
121 L -0.079
122 K -0.257
123 W 0.100
124 E 0.328
125 N -0.339
126 T -0.354
127 L -0.018
128 E -0.597
129 N 0.143
130 C -0.229
131 Y -0.880
132 Q 0.172
133 S -0.265
134 I -0.011
135 L 0.500
136 E -0.145
137 L -0.117
138 E 0.131
139 K 0.455
140 E 0.716
141 R 0.182
142 I 0.837
143 Q -0.474
144 L -0.621
145 L 0.258
146 C -0.015
147 N 0.157
148 N -0.687
149 L 0.180
150 N -0.608
151 Q -0.098
152 Y 1.233
153 S -0.542
154 Q -0.555
155 H -0.704
156 I -0.256
157 S -0.038
158 L -0.681
159 F -0.011
160 G -0.352
161 Q -0.145
162 T -0.348
163 L -0.075
164 T -0.722
165 T -0.093
166 C -0.273
167 H -0.760
168 T 0.234
169 Q 0.450
170 I 0.941
171 H -0.468
172 C -0.202
173 A -0.259
174 I 0.482
175 S -0.086
176 K -0.404
177 I 0.198
178 D 0.575
179 I -0.506
180 E -0.120
181 K -0.292
182 D -0.226
183 I 0.154
184 Q 0.421
185 A -0.607
186 V -0.144
187 M -0.500
188 E -0.345
189 E -0.586
190 T -0.484
191 A -0.650
192 I -0.287
193 L -0.640
194 S -0.772
195 T -0.761
196 E -0.627
197 N -0.712
198 K -0.629
199 S -0.095
200 E -0.124
201 F -0.181
202 L -0.492
203 L 0.641
204 T -0.836
205 D 0.481
206 Y -0.446
207 F -0.469
208 E -0.470
209 E 0.190
210 D 0.065
211 P -0.860
212 N -0.431
213 S -0.369
214 A -0.643
215 M 0.188
216 D -0.086
217 K -0.531
218 E -0.037
219 R -0.263
220 R 0.269
221 K -0.235
222 S -0.637
223 L -0.389
224 L -0.479
225 K -0.573
226 P -0.499
227 K -0.830
228 L -0.183
229 L -0.530
230 R -0.497
231 L -0.011
232 Q -0.586
233 R -0.207
234 D -0.607
235 I -0.140
236 E -0.389
237 K -0.379
238 A -0.477
239 S -0.439
240 K -0.014
241 D -0.412
242 K -0.092
243 E -0.361
244 G -0.311
245 L -0.190
246 E -0.042
247 R -0.449
248 M -0.191
249 L -0.536
250 K -0.264
251 T -0.437
252 Y -0.512
253 S -0.537
254 S -0.203
255 T -0.589
256 S -0.215
257 S -0.335
258 F -0.604
259 S -0.542
260 D -0.203
261 A -0.408
262 K -0.300
263 S -0.410
264 Q -0.474
265 K -0.312
266 D -0.785
267 T -0.185
268 A -0.770
269 A -0.500
270 L -0.352
271 M -0.400
272 D -0.763
273 E -0.300
274 N -0.832
275 N -0.534
276 L -0.758
277 K -0.830
278 L -0.760
279 D -0.567
280 L -0.751
281 L -0.616
282 E -0.124
283 A -0.555
284 N -0.467
285 S -0.660
286 Y -0.820
287 K -0.452
288 L -0.551
289 S -0.502
290 S -0.642
291 M -0.609
292 L -0.620
293 A -0.635
294 E -0.329
295 L -0.758
296 E -0.688
297 Q -0.480
298 R -0.476
299 P -0.601
300 Q -0.395
301 P -0.271
302 S -0.648
303 H -0.602
304 P -0.614
305 C -0.860
306 S -0.582
307 N -0.563
308 S -1.064
309 I -0.927
310 F -0.932
311 R -0.738
312 W -1.089
313 R -0.455
314 E -0.532
315 K -0.658
316 E -0.744
317 H -0.724
318 T -0.725
319 H -0.582
320 S -0.681
321 Y -0.823
322 V -0.733
323 K -0.923
324 I -0.971
325 S -0.552
326 R -0.907
327 P -0.719
328 F -0.786
329 L -0.886
330 M -0.852
331 K -0.145
332 R -0.582
333 L -0.955
334 E -0.178
335 N -0.511
336 I -0.851
337 V -0.995
338 S -0.728
339 K -0.647
340 A -0.686
341 S -0.507
342 S -0.834
343 G -0.682
344 G -0.882
345 Q -0.882
346 S -0.753
347 N -0.887
348 P -0.804
349 G -0.973
350 S -0.709
351 S -0.887
352 T -0.701
353 P -0.418
354 A -0.798
355 P -0.758
356 G -0.766
357 A -0.863
358 A -0.515
359 Q -0.539
360 L -0.856
361 S -0.396
362 S -0.785
363 R -0.768
364 L -0.759
365 C 1.611
366 K 1.871
367 A 1.988
368 L 1.332
369 Y 3.716
370 S 0.408
371 F 3.077
372 Q 0.168
373 A 2.257
374 R 0.414
375 Q -0.087
376 D -0.179
377 D 0.908
378 E 2.279
379 L 2.793
380 N 0.779
381 L 2.674
382 E -0.201
383 K 0.746
384 G 2.473
385 D 2.782
386 I 1.092
387 V 3.008
388 I -0.655
389 I 2.720
390 H -0.351
391 E 0.151
392 K 0.968
393 K 0.099
394 E 0.445
395 G 0.541
396 G 2.961
397 W 4.746
398 W 1.321
399 F -0.191
400 G 2.518
401 S -0.144
402 L 0.095
403 N 0.603
404 G 2.237
405 K 0.175
406 K 0.004
407 G 6.716
408 H 1.065
409 F 3.025
410 P 6.716
411 A -0.137
412 A 2.637
413 Y 4.124
414 V 2.476
415 E 1.372
416 E 0.774
417 L 1.940
418 P 0.757
419 S -1.000 *
420 N -1.000 *
421 A -1.000 *
422 G -1.000 *
423 N -1.000 *
424 T -1.000 *
425 A -1.000 *
426 T -1.000 *
427 K -1.000 *
428 A -1.000 *
* gap fraction no less than 0.50; conservation set to M-S
M: mean; S: standard deviation
al2co - The parameters are:
Input alignment file - 145.paln
Output conservation - STDOUT
Weighting scheme - independent-count based
Conservation calculation method - entropy-based
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation - 0.50
10 20 30 40 50 60
MKSTADLHQK LGKAIELEAI KPTYQVLNVQ EKKRKSLDNE VEKTANLVIS NWNQQIKAKK
70 80 90 100 110 120
KLMVSTKKHE ALFQLVESSK QSMTEKEKRK LLNKLTKSTE KLEKEDENYY QKNMAGYSTR
130 140 150 160 170 180
LKWENTLENC YQSILELEKE RIQLLCNNLN QYSQHISLFG QTLTTCHTQI HCAISKIDIE
190 200 210 220 230 240
KDIQAVMEET AILSTENKSE FLLTDYFEED PNSAMDKERR KSLLKPKLLR LQRDIEKASK
250 260 270 280 290 300
DKEGLERMLK TYSSTSSFSD AKSQKDTAAL MDENNLKLDL LEANSYKLSS MLAELEQRPQ
310 320 330 340 350 360
PSHPCSNSIF RWREKEHTHS YVKISRPFLM KRLENIVSKA SSGGQSNPGS STPAPGAAQL
370 380 390 400 410 420
SSRLCKALYS FQARQDDELN LEKGDIVIIH EKKEEGWWFG SLNGKKGHFP AAYVEELPSN
AGNTATKA
NOSTRIN belongs to the F-BAR protein family and functions as an adaptor protein in caveolar trafficking of endothelial nitric oxide synthase. NOSTRINβ is an isoform of NOSTRIN, resulting from alternative splicing. NOSTRINβ is identical to aa 79-506 of Nostrin. NOSTRINβ is mainly nuclear, whereas Nostrin is cytoplasmic. Wiesenthal et al. identified a putative NES at aa 135-144 and NLSs. However, the NLSs are not functioning in full length Nostrin, possibly due to the fact that the F-BAR domain, which is only present in Nostrin can mediate strong association with cytoplasmic membrane.
[1]. "NOSTRINbeta--a shortened NOSTRIN variant with a role in transcriptional regulation."
Wiesenthal A, Hoffmeister M, Siddique M, Kovacevic I, Oess S, Muller-Esterl W, Siehoff-Icking A (2009)
Traffic,
10:26-34
PubMed
Accurate identification of NESs is difficult because many sequences in the genome match the NES consensus.
Therefore, some published NESs may be mistakenly identified. Please help us improve the accuracy of NESdb
by providing either a positive or negative flag for the NES in this entry. Supporting comments are required to process the flag.