E3 ubiquitin-protein ligase MDM2
UniProt
Show FASTA Format
>gi|266516|sp|Q00987.1|MDM2_HUMAN RecName: Full=E3 ubiquitin-protein ligase Mdm2; AltName: Full=Double minute 2 protein; Short=Hdm2; AltName: Full=Oncoprotein Mdm2; AltName: Full=p53-binding protein Mdm2
MCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEK
QQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVVVNQQESSDSGTSVSENRCHLEGGSDQKDLVQ
ELQEEKPSSSHLVSRPSTSSRRRAISETEENSDELSGERQRKRHKSDSISLSFDESLALCVIREICCERS
SSSESTGTPSNPDLDAGVSEHSGDWLDQDSVSDQFSVEFEVESLDSEDYSLSEEGQELSDEDDEVYQVTV
YQAGESDTDSFEEDPEISLADYWKCTSCNEMNPPLPSHCNRCWALRENWLPEDKGKDKGEISEKAKLENS
TQAEEGFDVPDCKKTIVNDSRESCVEENDDKITQASQSQESEDYSQPSTSSSIIYSSQEDVKEFEREETQ
DKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMIVLTYF
P
Show Domain Info by CDD
Show Secondary Structure by PSIPRED
# PSIPRED HFORMAT (PSIPRED V3.2)
Conf: 988666854699886555578644421225468998987809999820189999989999
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
AA: MCNTNMSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQY
10 20 30 40 50 60
Conf: 987413892355521125662347458875460114899999984200013567789899
Pred: HHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
AA: IMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVVVNQQESSDSGT
70 80 90 100 110 120
Conf: 831122367899984101343203799999888899877655456877768745433000
Pred: CCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: SVSENRCHLEGGSDQKDLVQELQEEKPSSSHLVSRPSTSSRRRAISETEENSDELSGERQ
130 140 150 160 170 180
Conf: 024555665555420245554311002589988788999999998731257788779889
Pred: CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: RKRHKSDSISLSFDESLALCVIREICCERSSSSESTGTPSNPDLDAGVSEHSGDWLDQDS
190 200 210 220 230 240
Conf: 875666511342047777678955655685576505774412799999988888545733
Pred: CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCC
AA: VSDQFSVEFEVESLDSEDYSLSEEGQELSDEDDEVYQVTVYQAGESDTDSFEEDPEISLA
250 260 270 280 290 300
Conf: 433345444479999863113453312768999899978642000024765545676788
Pred: CCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCC
AA: DYWKCTSCNEMNPPLPSHCNRCWALRENWLPEDKGKDKGEISEKAKLENSTQAEEGFDVP
310 320 330 340 350 360
Conf: 765334479977510126765566665577777889998877533522332323220012
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
AA: DCKKTIVNDSRESCVEENDDKITQASQSQESEDYSQPSTSSSIIYSSQEDVKEFEREETQ
370 380 390 400 410 420
Conf: 222121258999987671144576520016605745300229989997535999988874
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCH
AA: DKEESVESSLPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQ
430 440 450 460 470 480
Conf: 47644543279
Pred: HHHHHHHHCCC
AA: PIQMIVLTYFP
490
Show Conservation Score by AL2CO
1 M -1.000 *
2 C -1.000 *
3 N -1.000 *
4 T -1.000 *
5 N -1.000 *
6 M 0.913
7 S 1.436
8 V 0.194
9 P -0.064
10 T 0.197
11 D 0.107
12 G 0.178
13 A -0.150
14 V -0.812
15 T -0.090
16 T 1.220
17 S 0.072
18 Q -0.406
19 I -0.847
20 P -0.220
21 A -0.171
22 S -0.338
23 E -0.353
24 Q -0.196
25 E -0.360
26 T 0.011
27 L 0.651
28 V 1.547
29 R 0.787
30 P 2.213
31 K 0.846
32 P 0.071
33 L 0.347
34 L 2.485
35 L 0.442
36 K 0.199
37 L 1.303
38 L 3.700
39 K 0.390
40 S -0.713
41 V 1.086
42 G 3.096
43 A 2.662
44 Q -0.283
45 K 0.677
46 D 1.553
47 T 0.039
48 Y 1.595
49 T 3.700
50 M -0.153
51 K 0.833
52 E 1.838
53 V 0.926
54 L 1.113
55 F -0.480
56 Y 1.563
57 L 2.769
58 G 1.440
59 Q 0.753
60 Y 1.977
61 I 1.867
62 M -0.248
63 T -0.476
64 K 1.966
65 R 0.171
66 L 2.800
67 Y 1.266
68 D 2.651
69 E 0.984
70 K -0.111
71 Q 0.324
72 Q 1.533
73 H 1.141
74 I 0.187
75 V 2.270
76 Y 0.152
77 C 2.398
78 S -0.268
79 N -0.109
80 D 2.294
81 L 0.280
82 L 1.936
83 G 0.969
84 D 0.115
85 L 1.338
86 F 1.150
87 G 0.835
88 V 0.413
89 P -0.204
90 S 0.473
91 F 2.284
92 S 1.348
93 V 0.358
94 K 0.039
95 E 1.152
96 H 0.195
97 R 1.050
98 K -0.274
99 I 1.107
100 Y 0.161
101 T -0.251
102 M 0.412
103 I 0.415
104 Y -0.717
105 R 0.333
106 N -0.066
107 L 0.249
108 V -0.389
109 V -0.204
110 V 0.491
111 N -0.168
112 Q -0.968
113 Q -0.764
114 E -0.471
115 S -0.509
116 S -0.632
117 D -0.664
118 S -0.519
119 G -0.844
120 T -0.520
121 S -0.463
122 V -1.037
123 S -1.146
124 E -0.435
125 N -0.657
126 R -0.585
127 C -1.154
128 H -1.072
129 L -0.909
130 E -0.705
131 G -0.420
132 G -0.922
133 S -0.662
134 D -0.702
135 Q -0.400
136 K -0.482
137 D -0.929
138 L -0.968
139 V -0.879
140 Q -0.737
141 E -0.342
142 L -0.663
143 Q -0.747
144 E -0.817
145 E -0.845
146 K -0.770
147 P -0.953
148 S -0.544
149 S -0.603
150 S -0.939
151 H -0.985
152 L -1.234
153 V -1.302
154 S -0.837
155 R -0.880
156 P -0.542
157 S -0.708
158 T -0.383
159 S -0.483
160 S -0.408
161 R -0.637
162 R -0.545
163 R -0.901
164 A -0.896
165 I -1.189
166 S -0.723
167 E -0.687
168 T -0.689
169 E -0.681
170 E -0.489
171 N -0.431
172 S -0.506
173 D -0.943
174 E -0.440
175 L -0.993
176 S -0.576
177 G -1.134
178 E -0.404
179 R -0.843
180 Q -0.460
181 R -0.617
182 K -0.259
183 R -0.293
184 H -0.643
185 K 0.051
186 S 0.318
187 D 0.481
188 S -0.335
189 I -0.790
190 S 0.008
191 L 0.305
192 S -0.362
193 F 0.474
194 D 0.200
195 E 0.304
196 S -0.006
197 L 0.064
198 A 0.183
199 L 0.489
200 C 0.024
201 V -0.128
202 I -0.145
203 R -0.030
204 E -0.579
205 I -0.285
206 C -0.913
207 C -0.446
208 E -0.495
209 R -0.443
210 S -0.385
211 S -0.681
212 S -0.669
213 S -0.623
214 E -0.153
215 S 0.294
216 T -0.668
217 G 0.006
218 T -0.477
219 P -0.967
220 S -0.455
221 N -0.806
222 P -0.301
223 D -0.215
224 L -0.707
225 D -0.256
226 A -0.401
227 G -0.673
228 V -0.551
229 S -0.580
230 E -0.451
231 H -0.588
232 S -0.035
233 G -0.188
234 D 0.532
235 W -0.001
236 L -0.766
237 D -0.397
238 Q -0.906
239 D 0.033
240 S -0.744
241 V -0.683
242 S -0.453
243 D 0.512
244 Q -0.475
245 F -0.406
246 S 0.065
247 V 0.405
248 E 0.044
249 F -0.552
250 E 0.454
251 V -0.701
252 E 0.106
253 S -0.182
254 L -0.939
255 D -0.343
256 S -0.488
257 E 0.485
258 D -0.523
259 Y -0.978
260 S -0.688
261 L -1.035
262 S -0.535
263 E 0.220
264 E -0.742
265 G -0.038
266 Q -0.629
267 E -0.811
268 L -0.686
269 S -0.541
270 D -0.841
271 E -0.566
272 D -0.731
273 D -0.847
274 E -0.840
275 V -0.466
276 Y -0.911
277 Q -0.829
278 V -0.962
279 T -0.422
280 V -0.572
281 Y -0.640
282 Q -0.239
283 A -0.731
284 G -0.318
285 E -0.701
286 S 0.205
287 D -0.107
288 T -0.787
289 D -0.335
290 S 0.269
291 F -0.516
292 E 0.019
293 E 0.051
294 D 0.624
295 P -0.082
296 E 0.544
297 I -0.220
298 S 0.168
299 L -0.283
300 A -0.814
301 D 0.861
302 Y -0.679
303 W 0.602
304 K -0.465
305 C 1.585
306 T -0.308
307 S -0.415
308 C 1.021
309 N -0.277
310 E -0.030
311 M -1.100
312 N 1.524
313 P -0.090
314 P 2.402
315 L -0.551
316 P -0.296
317 S 0.208
318 H 0.419
319 C 1.856
320 N -1.291
321 R -0.126
322 C 1.856
323 W 0.652
324 A -0.081
325 L 0.180
326 R 0.699
327 E -0.039
328 N 0.621
329 W 1.209
330 L 0.633
331 P 0.386
332 E 0.122
333 D -0.910
334 K -0.236
335 G -0.164
336 K -0.048
337 D -0.831
338 K -0.470
339 G -0.787
340 E -0.882
341 I -0.575
342 S -0.658
343 E -0.660
344 K -0.564
345 A -1.045
346 K -0.655
347 L -0.548
348 E -1.069
349 N -1.002
350 S -0.616
351 T -1.075
352 Q -0.880
353 A -0.575
354 E -0.760
355 E -0.520
356 G -0.113
357 F -0.304
358 D 1.050
359 V 0.360
360 P 0.771
361 D 0.684
362 C -0.122
363 K -0.680
364 K -0.262
365 T -0.757
366 I -0.639
367 V -0.323
368 N -0.615
369 D -0.321
370 S -0.593
371 R -0.923
372 E -0.506
373 S -0.620
374 C -1.155
375 V -1.052
376 E -0.524
377 E -0.609
378 N -0.766
379 D -0.394
380 D -0.704
381 K -1.116
382 I -1.143
383 T -0.587
384 Q -0.631
385 A -0.628
386 S -0.275
387 Q -0.999
388 S 0.110
389 Q -0.964
390 E 0.092
391 S -0.548
392 E -0.228
393 D -0.542
394 Y -0.977
395 S -0.153
396 Q -0.842
397 P -0.312
398 S -0.461
399 T -0.647
400 S -0.000
401 S -0.983
402 S -0.120
403 I -0.918
404 I -0.615
405 Y -1.181
406 S -0.572
407 S -1.061
408 Q -0.465
409 E -0.390
410 D -0.921
411 V -0.946
412 K -1.078
413 E -0.745
414 F -1.261
415 E -0.958
416 R -0.543
417 E -0.926
418 E -0.353
419 T -0.660
420 Q -0.805
421 D -0.621
422 K -0.561
423 E -1.064
424 E -0.823
425 S -0.663
426 V -1.060
427 E -0.289
428 S -1.266
429 S -0.957
430 L -0.621
431 P -0.254
432 L -1.008
433 N -0.465
434 A -0.485
435 I -0.446
436 E 0.503
437 P 0.725
438 C 3.116
439 V -0.385
440 I 1.133
441 C 3.700
442 Q -0.513
443 G -0.317
444 R 1.093
445 P 1.598
446 K 1.406
447 N 1.049
448 G 1.181
449 C 0.303
450 I 1.185
451 V 1.209
452 H 3.064
453 G 1.236
454 K 0.277
455 T 0.814
456 G 1.543
457 H 3.700
458 L 0.726
459 M -0.008
460 A 0.306
461 C 3.700
462 F 1.762
463 T -0.319
464 C 3.700
465 A 1.878
466 K 0.077
467 K 0.271
468 L 1.271
469 K 0.375
470 K 0.256
471 R -0.261
472 N -0.452
473 K 0.556
474 P -0.266
475 C 3.700
476 P 3.700
477 V 0.174
478 C 3.700
479 R 0.593
480 Q 0.370
481 P -0.357
482 I 2.669
483 Q -0.186
484 M -0.340
485 I 2.120
486 V 1.293
487 L 0.852
488 T 0.303
489 Y 2.097
490 F 0.677
491 P -1.000 *
* gap fraction no less than 0.50; conservation set to M-S
M: mean; S: standard deviation
al2co - The parameters are:
Input alignment file - 16.paln
Output conservation - STDOUT
Weighting scheme - independent-count based
Conservation calculation method - entropy-based
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation - 0.50
10 20 30 40 50 60
MCNTNMSVPT DGAVTTSQIP ASEQETLVRP KPLLLKLLKS VGAQKDTYTM KEVLFYLGQY
70 80 90 100 110 120
IMTKRLYDEK QQHIVYCSND LLGDLFGVPS FSVKEHRKIY TMIYRNLVVV NQQESSDSGT
130 140 150 160 170 180
SVSENRCHLE GGSDQKDLVQ ELQEEKPSSS HLVSRPSTSS RRRAISETEE NSDELSGERQ
190 200 210 220 230 240
RKRHKSDSIS LSFDESLALC VIREICCERS SSSESTGTPS NPDLDAGVSE HSGDWLDQDS
250 260 270 280 290 300
VSDQFSVEFE VESLDSEDYS LSEEGQELSD EDDEVYQVTV YQAGESDTDS FEEDPEISLA
310 320 330 340 350 360
DYWKCTSCNE MNPPLPSHCN RCWALRENWL PEDKGKDKGE ISEKAKLENS TQAEEGFDVP
370 380 390 400 410 420
DCKKTIVNDS RESCVEENDD KITQASQSQE SEDYSQPSTS SSIIYSSQED VKEFEREETQ
430 440 450 460 470 480
DKEESVESSL PLNAIEPCVI CQGRPKNGCI VHGKTGHLMA CFTCAKKLKK RNKPCPVCRQ
490
PIQMIVLTYF P
2LZG (NMR)
4XXB (X-Ray,2.40 Å resolution)
2F1Y (X-Ray,1.70 Å resolution)
2FOP (X-Ray,2.10 Å resolution)
2VJE (X-Ray,2.20 Å resolution)
3MQS (X-Ray,2.40 Å resolution)
HDM2 is over-expressed in a variety of human tumors and acts as an inhibitor of p53. HDM2 continuously shuttles between the nucleus and the cytoplasm. The export was mediated by an NES (aa 191-205), which functions independently to export GST fusion protein.
[1]. "Nucleo-cytoplasmic shuttling of the hdm2 oncoprotein regulates the levels of the p53 protein via a pathway used by the human immunodeficiency virus rev protein"
Roth, J., Dobbelstein, M., Freedman, D.A., Shenk, T., Levine, A.J. (1998)
EMBO J,
17:554-564
PubMed[2]. "A comparison of the activity, sequence specificity, and CRM1-dependence of different nuclear export signals"
Henderson, B.R., Eleftheriou, A. (2000)
Exp Cell Res,
256:213-224
PubMed
Accurate identification of NESs is difficult because many sequences in the genome match the NES consensus.
Therefore, some published NESs may be mistakenly identified. Please help us improve the accuracy of NESdb
by providing either a positive or negative flag for the NES in this entry. Supporting comments are required to process the flag.