*shown as underlined residues in the full sequence
1MEEIPAQEAAGSPRVQFQSLETQSECLSPEPQFVQDTDMEQGLTGDGETREENKLLIPKQ
KISEEVHSYKVRVGRLKHDITQVPETREVYKSEDRLERLQEILRKFLYLEREFRQITISK
ETFTSEKNNECHEPEKSFSLDSTIDADQRVLRIQNTDDNDKYDMSFNQNSASGKHEHLNL
TEDFQSSECKESLMDLSHLNKWESIPNTEKSYKCDVCGKIFHQSSALTRHQRIHTREKPY
KCKECEKSFSQSSSL
255
Show FASTA Format
>gi|116242863|sp|Q8N720.3|ZN655_HUMAN RecName: Full=Zinc finger protein 655; AltName: Full=Vav-interacting Krueppel-like protein
MEEIPAQEAAGSPRVQFQSLETQSECLSPEPQFVQDTDMEQGLTGDGETREENKLLIPKQKISEEVHSYK
VRVGRLKHDITQVPETREVYKSEDRLERLQEILRKFLYLEREFRQITISKETFTSEKNNECHEPEKSFSL
DSTIDADQRVLRIQNTDDNDKYDMSFNQNSASGKHEHLNLTEDFQSSECKESLMDLSHLNKWESIPNTEK
SYKCDVCGKIFHQSSALTRHQRIHTREKPYKCKECEKSFSQSSSLSRHKRIHTREKPYKCEASDKSCEAS
DKSCSPSSGIIQHKKIHTRAKSYKCSSCERVFSRSVHLTQHQKIHKEMPCKCTVCGSDFCHTSYLLEHQR
VHHEEKAYEYDEYGLAYIKQQGIHFREKPYTCSECGKDFRLNSHLIQHQRIHTGEKAHECNECGKAFSQT
SCLIQHHKMHRKEKSYECNEYEGSFSHSSDLILQQEVLTRQKAFDCDVWEKNSSQRAHLVQHQSIHTKEN
S
Show Domain Info by CDD
Show Secondary Structure by PSIPRED
# PSIPRED HFORMAT (PSIPRED V3.2)
Conf: 988864423699965443332235789999963236777877689877103557898876
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: MEEIPAQEAAGSPRVQFQSLETQSECLSPEPQFVQDTDMEQGLTGDGETREENKLLIPKQ
10 20 30 40 50 60
Conf: 446764575302367476568986446101388883137899898631533530012113
Pred: CCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHC
AA: KISEEVHSYKVRVGRLKHDITQVPETREVYKSEDRLERLQEILRKFLYLEREFRQITISK
70 80 90 100 110 120
Conf: 456799998889876446699975222334679899777843544556750242310358
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC
AA: ETFTSEKNNECHEPEKSFSLDSTIDADQRVLRIQNTDDNDKYDMSFNQNSASGKHEHLNL
130 140 150 160 170 180
Conf: 999999801221027677201013598998867884574345655200102346699987
Pred: CCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: TEDFQSSECKESLMDLSHLNKWESIPNTEKSYKCDVCGKIFHQSSALTRHQRIHTREKPY
190 200 210 220 230 240
Conf: 888432111486673452445779988789967213112598667976733424456699
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: KCKECEKSFSQSSSLSRHKRIHTREKPYKCEASDKSCEASDKSCSPSSGIIQHKKIHTRA
250 260 270 280 290 300
Conf: 987889766522553300101002389898998878424554310000123569888687
Pred: CCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: KSYKCSSCERVFSRSVHLTQHQKIHKEMPCKCTVCGSDFCHTSYLLEHQRVHHEEKAYEY
310 320 330 340 350 360
Conf: 802156773103357999868984321256565210001355599987888322000243
Pred: CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCC
AA: DEYGLAYIKQQGIHFREKPYTCSECGKDFRLNSHLIQHQRIHTGEKAHECNECGKAFSQT
370 380 390 400 410 420
Conf: 201423025869998777745431246661021100146998867885221123432012
Pred: CHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCHH
AA: SCLIQHHKMHRKEKSYECNEYEGSFSHSSDLILQQEVLTRQKAFDCDVWEKNSSQRAHLV
430 440 450 460 470 480
Conf: 11015448799
Pred: HHHCCCCCCCC
AA: QHQSIHTKENS
490
Show Conservation Score by AL2CO
1 M -1.000 *
2 E -1.000 *
3 E -1.000 *
4 I -1.000 *
5 P -1.000 *
6 A -1.000 *
7 Q -1.000 *
8 E -1.000 *
9 A -1.000 *
10 A -1.000 *
11 G -1.000 *
12 S -1.000 *
13 P -1.000 *
14 R -1.000 *
15 V -1.000 *
16 Q -1.000 *
17 F -1.000 *
18 Q -1.000 *
19 S -1.000 *
20 L -1.000 *
21 E -1.000 *
22 T -1.000 *
23 Q -1.000 *
24 S -1.000 *
25 E -1.000 *
26 C -1.000 *
27 L -1.000 *
28 S -1.000 *
29 P -1.000 *
30 E -1.000 *
31 P -1.000 *
32 Q -1.000 *
33 F -0.810
34 V -0.512
35 Q -0.749
36 D -0.494
37 T -0.478
38 D -0.157
39 M -0.958
40 E -0.581
41 Q -0.702
42 G -1.047
43 L -0.699
44 T -1.142
45 G -0.762
46 D -0.103
47 G -0.582
48 E -0.221
49 T -0.680
50 R -0.631
51 E -1.105
52 E -1.014
53 N -0.959
54 K -0.790
55 L -1.032
56 L -0.483
57 I -0.719
58 P -0.949
59 K -0.590
60 Q -0.717
61 K -0.749
62 I -0.481
63 S -0.559
64 E -0.735
65 E -0.346
66 V -0.621
67 H -0.660
68 S -0.626
69 Y -0.583
70 K -0.927
71 V -0.908
72 R -0.842
73 V -0.793
74 G -0.699
75 R -0.305
76 L -1.031
77 K -0.918
78 H -1.028
79 D -1.146
80 I -1.204
81 T -0.977
82 Q -1.182
83 V -0.866
84 P -0.826
85 E -1.056
86 T -0.900
87 R -0.905
88 E -0.464
89 V -0.757
90 Y -0.831
91 K -0.971
92 S -1.004
93 E -0.371
94 D -1.000 *
95 R -0.666
96 L -0.612
97 E -0.505
98 R -0.878
99 L -0.545
100 Q -0.860
101 E -0.705
102 I -0.902
103 L -0.912
104 R -0.400
105 K -0.887
106 F -0.642
107 L -1.121
108 Y -1.259
109 L -1.000 *
110 E -1.000 *
111 R -1.000 *
112 E -1.113
113 F -0.952
114 R -0.628
115 Q -0.993
116 I -0.425
117 T -0.689
118 I -1.078
119 S -0.572
120 K -0.724
121 E -0.521
122 T -0.581
123 F -0.437
124 T -0.601
125 S -0.473
126 E -0.067
127 K 0.078
128 N -0.660
129 N -0.228
130 E -0.658
131 C 0.348
132 H -0.689
133 E -0.645
134 P 0.142
135 E -0.151
136 K -0.165
137 S -0.530
138 F 0.675
139 S -0.811
140 L -1.130
141 D -1.075
142 S -0.739
143 T -1.081
144 I 0.134
145 D -0.720
146 A -1.042
147 D -0.288
148 Q -0.627
149 R -0.321
150 V -0.428
151 L -0.238
152 R -0.252
153 I -0.186
154 Q -0.192
155 N 0.142
156 T -0.482
157 D 0.097
158 D -0.565
159 N 0.398
160 D -0.841
161 K -0.335
162 Y 0.167
163 D -0.267
164 M 0.404
165 S -0.733
166 F 1.156
167 N -0.869
168 Q -1.074
169 N -0.919
170 S -0.672
171 A -1.053
172 S 0.584
173 G -0.694
174 K -0.989
175 H 0.684
176 E -0.641
177 H -0.462
178 L -0.488
179 N 1.087
180 L -0.432
181 T 0.106
182 E 0.758
183 D -0.231
184 F 0.734
185 Q -0.543
186 S 1.057
187 S -0.794
188 E -0.263
189 C 1.048
190 K -0.242
191 E 0.528
192 S -0.683
193 L 1.462
194 M -0.880
195 D -1.100
196 L -0.961
197 S -0.768
198 H -1.007
199 L 0.835
200 N -0.667
201 K -0.957
202 W 0.732
203 E -0.372
204 S -0.333
205 I -0.349
206 P 0.992
207 N 0.157
208 T 0.226
209 E 0.290
210 K 0.692
211 S 0.215
212 Y 0.792
213 K -0.708
214 C 1.226
215 D -0.855
216 V -0.258
217 C 1.712
218 G -0.071
219 K 0.775
220 I -0.304
221 F 2.075
222 H -0.789
223 Q -1.127
224 S -1.001
225 S -0.807
226 A -1.087
227 L 0.881
228 T -0.673
229 R -0.941
230 H 1.368
231 Q -0.381
232 R -0.188
233 I -0.004
234 H 2.003
235 T 0.185
236 R 0.412
237 E 0.770
238 K 1.010
239 P 0.546
240 Y 0.936
241 K -0.578
242 C 2.292
243 K -0.871
244 E -0.478
245 C 2.376
246 E 0.002
247 K 1.020
248 S -0.486
249 F 2.322
250 S -0.722
251 Q -1.141
252 S -1.003
253 S -0.720
254 S -1.091
255 L 0.904
256 S -0.566
257 R -0.946
258 H 2.443
259 K -0.361
260 R -0.088
261 I -0.041
262 H 1.905
263 T 0.699
264 R 0.372
265 E 0.224
266 K 0.717
267 P 0.701
268 Y 1.057
269 K -0.592
270 C 2.041
271 E -0.863
272 A -0.426
273 S 1.845
274 D 0.252
275 K 1.204
276 S 0.057
277 C 2.066
278 E -0.777
279 A -0.778
280 S 1.180
281 D -0.126
282 K 0.391
283 S -0.696
284 C 1.382
285 S -0.379
286 P -1.146
287 S -0.837
288 S -0.703
289 G -1.029
290 I 1.188
291 I -0.523
292 Q -1.017
293 H 1.905
294 K -0.175
295 K -0.324
296 I -0.189
297 H 2.559
298 T 0.383
299 R 0.916
300 A 0.587
301 K 1.050
302 S 0.639
303 Y 1.047
304 K -0.534
305 C 3.025
306 S -0.800
307 S -0.527
308 C 2.346
309 E 0.023
310 R 1.042
311 V -0.410
312 F 1.884
313 S -0.773
314 R -1.091
315 S -0.773
316 V -0.753
317 H -1.048
318 L 1.238
319 T -0.724
320 Q -0.888
321 H 3.025
322 Q -0.133
323 K -0.211
324 I -0.136
325 H 2.685
326 K 0.885
327 E 0.641
328 M 1.205
329 P 0.422
330 C 1.428
331 K -0.585
332 C 2.341
333 T -0.803
334 V -0.269
335 C 2.270
336 G -0.061
337 S 0.679
338 D -0.322
339 F 1.570
340 C -0.629
341 H -1.074
342 T -0.844
343 S -0.828
344 Y -0.983
345 L 1.388
346 L -0.695
347 E -1.066
348 H 2.692
349 Q -0.219
350 R 0.003
351 V -0.176
352 H 2.376
353 H 0.323
354 E 0.386
355 E 0.197
356 K 1.356
357 A 0.528
358 Y 1.386
359 E -0.612
360 Y 1.872
361 D -0.781
362 E -0.483
363 Y 2.227
364 G 0.095
365 L 0.862
366 A -0.124
367 Y 1.768
368 I -0.298
369 K -0.851
370 Q 1.734
371 Q -0.073
372 G -0.195
373 I 0.064
374 H 2.363
375 F 0.535
376 R 0.431
377 E 0.543
378 K 1.186
379 P 1.136
380 Y 1.290
381 T -0.580
382 C 3.025
383 S -0.816
384 E -0.418
385 C 2.054
386 G 0.039
387 K 1.284
388 D -0.233
389 F 2.365
390 R -0.652
391 L -1.079
392 N -0.691
393 S -0.659
394 H -0.959
395 L 0.836
396 I -0.611
397 Q -0.962
398 H 2.018
399 Q -0.376
400 R -0.102
401 I -0.246
402 H 2.688
403 T 0.448
404 G 0.676
405 E 0.293
406 K 1.218
407 A 0.697
408 H 1.400
409 E -0.675
410 C 2.065
411 N -0.832
412 E -0.290
413 C 2.295
414 G 0.152
415 K 1.071
416 A -0.160
417 F 2.128
418 S -0.818
419 Q -1.177
420 T -0.860
421 S -0.612
422 C -0.979
423 L 1.276
424 I -0.721
425 Q -0.973
426 H 1.830
427 H -0.343
428 K -0.051
429 M -0.194
430 H 2.677
431 R 0.702
432 K 0.554
433 E 0.325
434 K 0.798
435 S 0.656
436 Y 1.322
437 E -0.697
438 C 1.734
439 N -0.868
440 E -0.383
441 Y 1.604
442 E 0.073
443 G 1.021
444 S -0.213
445 F 1.809
446 S -0.696
447 H -1.067
448 S -0.861
449 S -0.769
450 D -0.991
451 L 1.234
452 I -0.760
453 L -1.018
454 Q 1.463
455 Q -0.100
456 E -0.425
457 V -0.092
458 L 1.401
459 T 0.414
460 R 0.374
461 Q 0.150
462 K 1.175
463 A 0.764
464 F 1.364
465 D -0.729
466 C 1.610
467 D -0.851
468 V -0.699
469 W 1.637
470 E -0.224
471 K 0.660
472 N -0.290
473 S 1.487
474 S -0.687
475 Q -1.072
476 R -0.851
477 A -0.850
478 H -1.017
479 L 1.670
480 V -0.812
481 Q -1.008
482 H 1.790
483 Q -0.140
484 S -0.181
485 I -0.237
486 H 1.969
487 T 0.309
488 K 0.076
489 E 1.289
490 N 0.726
491 S -1.000 *
* gap fraction no less than 0.50; conservation set to M-S
M: mean; S: standard deviation
al2co - The parameters are:
Input alignment file - 207.paln
Output conservation - STDOUT
Weighting scheme - independent-count based
Conservation calculation method - entropy-based
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation - 0.50
10 20 30 40 50 60
MEEIPAQEAA GSPRVQFQSL ETQSECLSPE PQFVQDTDME QGLTGDGETR EENKLLIPKQ
70 80 90 100 110 120
KISEEVHSYK VRVGRLKHDI TQVPETREVY KSEDRLERLQ EILRKFLYLE REFRQITISK
130 140 150 160 170 180
ETFTSEKNNE CHEPEKSFSL DSTIDADQRV LRIQNTDDND KYDMSFNQNS ASGKHEHLNL
190 200 210 220 230 240
TEDFQSSECK ESLMDLSHLN KWESIPNTEK SYKCDVCGKI FHQSSALTRH QRIHTREKPY
250 260 270 280 290 300
KCKECEKSFS QSSSLSRHKR IHTREKPYKC EASDKSCEAS DKSCSPSSGI IQHKKIHTRA
310 320 330 340 350 360
KSYKCSSCER VFSRSVHLTQ HQKIHKEMPC KCTVCGSDFC HTSYLLEHQR VHHEEKAYEY
370 380 390 400 410 420
DEYGLAYIKQ QGIHFREKPY TCSECGKDFR LNSHLIQHQR IHTGEKAHEC NECGKAFSQT
430 440 450 460 470 480
SCLIQHHKMH RKEKSYECNE YEGSFSHSSD LILQQEVLTR QKAFDCDVWE KNSSQRAHLV
490
QHQSIHTKEN S
Full length VIK-1 is nuclear with some cytoplasmic presence. The N-terminal portin (1-255) is exclusively cytoplasmic. AAs 294-356 is the proposed NLS, but it doesn't resemble classical NLS.
[1]. "Characterization of VIK-1: a new Vav-interacting Kruppel-like protein."
Houlard M, Romero-Portillo F, Germani A, Depaux A, Regnier-Ricard F, Gisselbrecht S, Varin-Blank N (2005)
Oncogene,
24:28-38
PubMed
Accurate identification of NESs is difficult because many sequences in the genome match the NES consensus.
Therefore, some published NESs may be mistakenly identified. Please help us improve the accuracy of NESdb
by providing either a positive or negative flag for the NES in this entry. Supporting comments are required to process the flag.