65 kDa early nonstructural protein
UniProt
Show FASTA Format
>gi|136974|sp|P16727.1|UL84_HCMVA RecName: Full=65 kDa early nonstructural protein; AltName: Full=Protein UL84
MPRVDPNLRNRARRPRARRGGGGGVGSNSSRHSGKCRRQRRALSAPPLTFLATTTTTTMMGVASTDDDSL
LLKTPDELDKYSGSPQTILTLTDKHDIRQPRVHRGTYHLIQLHLDLRPEELRDPFQILLSTPLQLGEAND
ESQTAPATLQEEETAASHEPEKKKEKQEKKEEDEDDRNDDRERGILCVVSNEDSDVRPAFSLFPARPGCH
ILRSVIDQQLTRMAIVRLSLNLFALRIITPLLKRLPLRRKAAHHTALHDCLALHLPELTFEPTLDINNVT
ENAASVADTAESTDADLTPTLTVRVRHALCWHRVEGGISGPRGLTSRISARLSETTAKTLGPSVFGRLEL
DPNESPPDLTLSSLTLYQDGILRFNVTCDRTEAPADPVAFRLRLRRETVRRPFFSDAPLPYFVPPRSGAA
DEGLEVRVPYELTLKNSHTLRIYRRFYGPYLGVFVPHNRQGLKMPVTVWLPRSWLELTVLVSDENGATFP
RDALLGRLYFISSKHTLNRGCLSAMTHQVKSTLHSRSTSHSPSQQQLSVLGASIALEDLLPMRLASPETE
PQDCKLTENTTEKTSPVTLAMVCGDL
Show Domain Info by CDD
Show Secondary Structure by PSIPRED
# PSIPRED HFORMAT (PSIPRED V3.2)
Conf: 998892111222464322589998889987655222342200279981457532551001
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCC
AA: MPRVDPNLRNRARRPRARRGGGGGVGSNSSRHSGKCRRQRRALSAPPLTFLATTTTTTMM
10 20 30 40 50 60
Conf: 113689532013598422335799831999445677878766774135999721479533
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCC
AA: GVASTDDDSLLLKTPDELDKYSGSPQTILTLTDKHDIRQPRVHRGTYHLIQLHLDLRPEE
70 80 90 100 110 120
Conf: 579212320375223444665555765401222102689314565421012333565644
Pred: CCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCC
AA: LRDPFQILLSTPLQLGEANDESQTAPATLQEEETAASHEPEKKKEKQEKKEEDEDDRNDD
130 140 150 160 170 180
Conf: 432169995259999654310245898870003577586312104547630111100122
Pred: CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCEEEEEEEEEEEECCCC
AA: RERGILCVVSNEDSDVRPAFSLFPARPGCHILRSVIDQQLTRMAIVRLSLNLFALRIITP
190 200 210 220 230 240
Conf: 234545331234533222111148997000357677863212223356444556789980
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
AA: LLKRLPLRRKAAHHTALHDCLALHLPELTFEPTLDINNVTENAASVADTAESTDADLTPT
250 260 270 280 290 300
Conf: 899211124432058998799885322334468757732198532210028999999730
Pred: EEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCE
AA: LTVRVRHALCWHRVEGGISGPRGLTSRISARLSETTAKTLGPSVFGRLELDPNESPPDLT
310 320 330 340 350 360
Conf: 333554314548998754224478996379998413687887445899876348999998
Pred: EEEEEEEECCEEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
AA: LSSLTLYQDGILRFNVTCDRTEAPADPVAFRLRLRRETVRRPFFSDAPLPYFVPPRSGAA
370 380 390 400 410 420
Conf: 876289710001479861698653311770586421589851235876420405999999
Pred: CCCEEEEEECCCCCCCCEEEEEEEEECCCEEEEEECCCCCCEEEEEEEEECCCEEEEEEE
AA: DEGLEVRVPYELTLKNSHTLRIYRRFYGPYLGVFVPHNRQGLKMPVTVWLPRSWLELTVL
430 440 450 460 470 480
Conf: 818874021278723138995403112457432233220000025767889895222220
Pred: EECCCCCEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
AA: VSDENGATFPRDALLGRLYFISSKHTLNRGCLSAMTHQVKSTLHSRSTSHSPSQQQLSVL
490 500 510 520 530 540
Conf: 5510145556533479999821111102456799860898730589
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC
AA: GASIALEDLLPMRLASPETEPQDCKLTENTTEKTSPVTLAMVCGDL
550 560 570 580
Show Conservation Score by AL2CO
1 M -1.000 *
2 P -1.000 *
3 R -1.000 *
4 V -1.000 *
5 D -1.000 *
6 P -1.000 *
7 N -1.000 *
8 L -1.000 *
9 R -1.000 *
10 N -1.000 *
11 R -1.000 *
12 A -1.000 *
13 R -1.000 *
14 R -1.000 *
15 P -1.000 *
16 R -1.000 *
17 A -1.000 *
18 R -1.000 *
19 R -1.000 *
20 G -1.000 *
21 G -1.000 *
22 G -1.000 *
23 G -1.000 *
24 G -1.000 *
25 V -1.000 *
26 G -1.000 *
27 S -1.000 *
28 N -1.000 *
29 S -1.000 *
30 S -1.000 *
31 R -1.000 *
32 H -1.000 *
33 S -1.000 *
34 G -1.000 *
35 K -1.000 *
36 C -1.000 *
37 R -1.000 *
38 R -1.000 *
39 Q -1.000 *
40 R -1.000 *
41 R -1.000 *
42 A -1.000 *
43 L -1.000 *
44 S -1.000 *
45 A -1.000 *
46 P -1.000 *
47 P -1.000 *
48 L -1.000 *
49 T -1.000 *
50 F -1.000 *
51 L -1.000 *
52 A -1.000 *
53 T -1.000 *
54 T -1.000 *
55 T -1.000 *
56 T -1.000 *
57 T -1.000 *
58 T -1.000 *
59 M -1.000 *
60 M -1.000 *
61 G -1.000 *
62 V -1.000 *
63 A -1.000 *
64 S -1.000 *
65 T -1.000 *
66 D -1.000 *
67 D -1.000 *
68 D -1.000 *
69 S -1.000 *
70 L -1.000 *
71 L -1.000 *
72 L -1.000 *
73 K -1.000 *
74 T -1.000 *
75 P -1.000 *
76 D -1.000 *
77 E -1.000 *
78 L -1.000 *
79 D -1.000 *
80 K -1.000 *
81 Y -1.000 *
82 S -1.000 *
83 G -1.000 *
84 S -1.000 *
85 P -1.000 *
86 Q 0.095
87 T 0.230
88 I 0.206
89 L 2.277
90 T 1.106
91 L 1.114
92 T -0.492
93 D 1.018
94 K -0.462
95 H -0.943
96 D -1.351
97 I -0.936
98 R -1.334
99 Q -0.403
100 P 0.310
101 R -1.305
102 V -0.873
103 H -0.918
104 R -0.393
105 G 0.206
106 T 0.189
107 Y -0.444
108 H -0.458
109 L 1.166
110 I 0.939
111 Q 1.182
112 L -0.438
113 H -0.396
114 L -0.858
115 D 0.144
116 L -0.375
117 R 0.911
118 P 1.166
119 E -0.827
120 E 0.931
121 L 1.166
122 R -1.222
123 D -0.936
124 P -0.379
125 F 1.107
126 Q 0.168
127 I 0.889
128 L 0.206
129 L 0.889
130 S 1.020
131 T -0.520
132 P -0.476
133 L 0.255
134 Q -0.923
135 L 0.125
136 G -1.000 *
137 E -1.000 *
138 A -1.000 *
139 N -1.000 *
140 D -1.000 *
141 E -1.000 *
142 S -1.000 *
143 Q -1.000 *
144 T -1.000 *
145 A -1.000 *
146 P -1.000 *
147 A -1.000 *
148 T -1.000 *
149 L -1.000 *
150 Q -1.000 *
151 E -1.000 *
152 E 0.109
153 E -0.965
154 T 0.079
155 A -0.531
156 A -0.532
157 S -0.532
158 H -0.532
159 E 0.874
160 P 0.980
161 E 0.934
162 K -1.000 *
163 K -1.000 *
164 K -1.000 *
165 E -1.000 *
166 K -1.000 *
167 Q -1.000 *
168 E -1.000 *
169 K -1.000 *
170 K -1.000 *
171 E -1.000 *
172 E -1.000 *
173 D -1.000 *
174 E -1.000 *
175 D -1.000 *
176 D -1.000 *
177 R -1.000 *
178 N -1.000 *
179 D -1.000 *
180 D -1.000 *
181 R -1.000 *
182 E 1.029
183 R 0.286
184 G 0.054
185 I -0.897
186 L 0.158
187 C 2.277
188 V 0.175
189 V 0.166
190 S 0.197
191 N 0.868
192 E -1.285
193 D -0.390
194 S 1.189
195 D 1.182
196 V -0.485
197 R -1.322
198 P 0.117
199 A -0.369
200 F 0.281
201 S 0.138
202 L -0.451
203 F 1.182
204 P -0.416
205 A -0.502
206 R -1.668
207 P -0.379
208 G 1.166
209 C 0.310
210 H -0.408
211 I 0.143
212 L -0.429
213 R 0.309
214 S 0.215
215 V -1.238
216 I 0.086
217 D 0.379
218 Q -1.323
219 Q -0.870
220 L -0.785
221 T -1.647
222 R -0.495
223 M -0.449
224 A 0.129
225 I 0.310
226 V 0.104
227 R 2.277
228 L 1.166
229 S 0.143
230 L 1.182
231 N 2.277
232 L 0.053
233 F 2.277
234 A 2.277
235 L 0.310
236 R 0.272
237 I -0.962
238 I 0.115
239 T -0.949
240 P 2.277
241 L -0.390
242 L -0.869
243 K -1.268
244 R 0.048
245 L 1.166
246 P 1.221
247 L 1.065
248 R 1.065
249 R 0.189
250 K -0.929
251 A -1.612
252 A -1.267
253 H -1.294
254 H -0.929
255 T 0.056
256 A 0.058
257 L 0.206
258 H 1.020
259 D 1.020
260 C 1.020
261 L -0.484
262 A -0.982
263 L 1.020
264 H -0.952
265 L -0.495
266 P -0.483
267 E -0.531
268 L 0.098
269 T -0.311
270 F 0.160
271 E -1.296
272 P -1.212
273 T -0.871
274 L -2.193
275 D -0.928
276 I -0.849
277 N -0.495
278 N -0.945
279 V -0.918
280 T 0.208
281 E -1.681
282 N -1.349
283 A -1.368
284 A -1.000 *
285 S -1.000 *
286 V -1.000 *
287 A -1.000 *
288 D -1.000 *
289 T -1.000 *
290 A -1.000 *
291 E -1.000 *
292 S -1.000 *
293 T -1.000 *
294 D -1.000 *
295 A -1.000 *
296 D -1.000 *
297 L -1.000 *
298 T 0.109
299 P -0.491
300 T -0.225
301 L -0.373
302 T 0.929
303 V -0.407
304 R -0.257
305 V 0.309
306 R -1.324
307 H -1.329
308 A -0.923
309 L -0.390
310 C 0.206
311 W 1.189
312 H 1.182
313 R -0.915
314 V -0.924
315 E 1.182
316 G -0.390
317 G -0.390
318 I -0.390
319 S 0.191
320 G 2.277
321 P 1.114
322 R 1.114
323 G 1.106
324 L -0.390
325 T -0.315
326 S -0.390
327 R 0.309
328 I 0.205
329 S -0.947
330 A -0.945
331 R -0.889
332 L 0.394
333 S 0.152
334 E -1.313
335 T -0.389
336 T 0.151
337 A -0.479
338 K -1.634
339 T -0.432
340 L -0.364
341 G -0.403
342 P -1.320
343 S -0.463
344 V -1.296
345 F 1.166
346 G 1.008
347 R -0.378
348 L 0.310
349 E -0.982
350 L -0.984
351 D 0.934
352 P -1.000 *
353 N -0.923
354 E -1.648
355 S 0.432
356 P -0.944
357 P -0.335
358 D -1.327
359 L 0.144
360 T -0.913
361 L 0.187
362 S 0.319
363 S 0.159
364 L 0.310
365 T -0.924
366 L -0.273
367 Y -0.918
368 Q -0.492
369 D 1.189
370 G -0.342
371 I -0.866
372 L 1.107
373 R 0.168
374 F 0.206
375 N -0.390
376 V -0.390
377 T 0.144
378 C -0.915
379 D -1.286
380 R -0.435
381 T -1.604
382 E -1.295
383 A -1.666
384 P -0.411
385 A -1.301
386 D -1.295
387 P -0.438
388 V 0.190
389 A 0.377
390 F 0.143
391 R -0.337
392 L 0.363
393 R 0.246
394 L 2.277
395 R -0.409
396 R -0.415
397 E -1.300
398 T -0.436
399 V 0.144
400 R -1.666
401 R -0.442
402 P 2.277
403 F 0.960
404 F 0.868
405 S 2.277
406 D -0.402
407 A 0.286
408 P 1.166
409 L -0.947
410 P 2.277
411 Y 1.182
412 F 1.182
413 V -0.981
414 P 1.097
415 P -0.500
416 R -0.879
417 S -0.453
418 G -0.933
419 A -1.000 *
420 A -1.000 *
421 D -0.385
422 E -0.531
423 G -0.923
424 L 1.182
425 E -0.363
426 V 2.277
427 R -0.482
428 V 0.101
429 P 2.277
430 Y 0.144
431 E 1.104
432 L 0.144
433 T -1.194
434 L -0.925
435 K -0.390
436 N -1.289
437 S 0.050
438 H 0.225
439 T -0.919
440 L 1.101
441 R 1.166
442 I 0.099
443 Y 1.166
444 R 2.277
445 R 0.868
446 F 0.868
447 Y 2.277
448 G 2.277
449 P 0.143
450 Y -0.401
451 L 1.189
452 G 1.182
453 V -0.291
454 F 2.277
455 V -0.403
456 P 2.277
457 H -0.905
458 N -0.947
459 R 0.271
460 Q -0.947
461 G -0.869
462 L 0.158
463 K -1.636
464 M 0.144
465 P 0.868
466 V 0.319
467 T 0.143
468 V -0.921
469 W 2.277
470 L 0.919
471 P 2.277
472 R 1.065
473 S 0.377
474 W 2.277
475 L 2.277
476 E 1.107
477 L 0.135
478 T -0.832
479 V 0.042
480 L -0.885
481 V -0.985
482 S -0.482
483 D -0.924
484 E -1.232
485 N -0.950
486 G -0.487
487 A -0.410
488 T -1.287
489 F -0.386
490 P -0.918
491 R 1.101
492 D 0.105
493 A -1.304
494 L -0.897
495 L 0.901
496 G 2.277
497 R -0.486
498 L 0.310
499 Y 2.277
500 F 2.277
501 I 0.144
502 S -0.449
503 S -0.390
504 K -0.947
505 H -0.409
506 T -1.247
507 L -0.947
508 N 0.310
509 R 0.319
510 G -0.390
511 C -0.371
512 L -0.869
513 S 0.144
514 A 0.144
515 M -0.388
516 T -0.384
517 H -0.883
518 Q 0.144
519 V 1.166
520 K -0.435
521 S 2.277
522 T -0.931
523 L 0.355
524 H 1.020
525 S -1.000 *
526 R -1.000 *
527 S -1.000 *
528 T -1.000 *
529 S -1.000 *
530 H -1.000 *
531 S -1.000 *
532 P -1.000 *
533 S -1.365
534 Q -1.359
535 Q -0.938
536 Q -0.947
537 L 0.187
538 S 0.309
539 V 0.868
540 L 1.166
541 G 2.277
542 A 0.095
543 S 0.144
544 I -0.190
545 A -1.339
546 L 1.166
547 E -0.941
548 D 1.166
549 L 2.277
550 L -0.420
551 P 0.154
552 M 0.228
553 R -0.860
554 L 0.337
555 A -1.359
556 S -0.454
557 P 0.981
558 E -0.944
559 T -0.407
560 E 0.100
561 P 0.125
562 Q -0.499
563 D -1.350
564 C -0.469
565 K -0.956
566 L -0.500
567 T -0.504
568 E -0.509
569 N -0.962
570 T -0.505
571 T -1.000 *
572 E -1.000 *
573 K -1.000 *
574 T -1.000 *
575 S -1.000 *
576 P 0.934
577 V 0.934
578 T 2.277
579 L 0.097
580 A 2.277
581 M 2.277
582 V 0.980
583 C -1.000 *
584 G -1.000 *
585 D -1.000 *
586 L -1.000 *
* gap fraction no less than 0.50; conservation set to M-S
M: mean; S: standard deviation
al2co - The parameters are:
Input alignment file - 209.paln
Output conservation - STDOUT
Weighting scheme - independent-count based
Conservation calculation method - entropy-based
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation - 0.50
10 20 30 40 50 60
MPRVDPNLRN RARRPRARRG GGGGVGSNSS RHSGKCRRQR RALSAPPLTF LATTTTTTMM
70 80 90 100 110 120
GVASTDDDSL LLKTPDELDK YSGSPQTILT LTDKHDIRQP RVHRGTYHLI QLHLDLRPEE
130 140 150 160 170 180
LRDPFQILLS TPLQLGEAND ESQTAPATLQ EEETAASHEP EKKKEKQEKK EEDEDDRNDD
190 200 210 220 230 240
RERGILCVVS NEDSDVRPAF SLFPARPGCH ILRSVIDQQL TRMAIVRLSL NLFALRIITP
250 260 270 280 290 300
LLKRLPLRRK AAHHTALHDC LALHLPELTF EPTLDINNVT ENAASVADTA ESTDADLTPT
310 320 330 340 350 360
LTVRVRHALC WHRVEGGISG PRGLTSRISA RLSETTAKTL GPSVFGRLEL DPNESPPDLT
370 380 390 400 410 420
LSSLTLYQDG ILRFNVTCDR TEAPADPVAF RLRLRRETVR RPFFSDAPLP YFVPPRSGAA
430 440 450 460 470 480
DEGLEVRVPY ELTLKNSHTL RIYRRFYGPY LGVFVPHNRQ GLKMPVTVWL PRSWLELTVL
490 500 510 520 530 540
VSDENGATFP RDALLGRLYF ISSKHTLNRG CLSAMTHQVK STLHSRSTSH SPSQQQLSVL
550 560 570 580
GASIALEDLL PMRLASPETE PQDCKLTENT TEKTSPVTLA MVCGDL
UL84 is an essential regulatory protein that is capable of shuttling between the nucleus and the cytoplasm. pUL84 has a nonconventional nuclear targeting domain comprising 282 amino acids. It also has two independent NESs, which are located within the proposed NLS.
[1]. "Human cytomegalovirus UL84 protein contains two nuclear export signals and shuttles between the nucleus and the cytoplasm."
Lischka P, Rauh C, Mueller R, Stamminger T (2006)
J Virol,
80:10274-80
PubMed
Accurate identification of NESs is difficult because many sequences in the genome match the NES consensus.
Therefore, some published NESs may be mistakenly identified. Please help us improve the accuracy of NESdb
by providing either a positive or negative flag for the NES in this entry. Supporting comments are required to process the flag.