NESdb

Hematopoietic SH2 domain-containing protein UniProt

Adaptor in lymphocytes of unknown function X

Homo sapiens (Human)

LMB Sensitive ^{Ref.1The carboxyl-terminal segment of the adaptor protein ALX directs its nuclear export during T cell activation., Shapiro et al., J Biol Chem, 2005}

*highlighted yellow in the full sequence

L203A/L207A/L210A ^{Ref.1The carboxyl-terminal segment of the adaptor protein ALX directs its nuclear export during T cell activation., Shapiro et al., J Biol Chem, 2005}

Unknown

Undetermined

Unknown

Show FASTA Format

>gi|74732160|sp|Q96JZ2.1|HSH2D_HUMAN RecName: Full=Hematopoietic SH2 domain-containing protein; Short=Hematopoietic SH2 protein; AltName: Full=Adaptor in lymphocytes of unknown function X
MTEAGKLPLPLPPRLDWFVHTQMGQLAQDGVPEWFHGAISREDAENLLESQPLGSFLIRVSHSHVGYTLS
YKAQSSCCHFMVKLLDDGTFMIPGEKVAHTSLDALVTFHQQKPIEPRRELLTQPCRQKDPANVDYEDLFL
YSNAVAEEAACPVSAPEEASPKPVLCHQSKERKPSAEMNRITTKEATSSCPPKSPLGETRQKLWRSLKML
PERGQRVRQQLKSHLATVNLSSLLDVRRSTVISGPGTGKGSQDHSGDPTSGDRGYTDPCVATSLKSPSQP
QAPKDRKVPTRKAERSVSCIEVTPGDRSWHQMVVRALSSQESKPEHQGLAEPENDQLPEEYQQPPPFAPG
YC

Show Domain Info by CDD

Show Secondary Structure by PSIPRED

    	# PSIPRED HFORMAT (PSIPRED V3.2)

Conf: 965799999997111002533135455599998834436788899742189996169972
Pred: CCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEE
  AA: MTEAGKLPLPLPPRLDWFVHTQMGQLAQDGVPEWFHGAISREDAENLLESQPLGSFLIRV
              10        20        30        40        50        60


Conf: 178767299774199310489953099983555998756789999999831788988730
Pred: ECCCCCEEEEEEECCCEEEEEEEECCCCCEEECCCCCCCCCHHHHHHHHHCCCCCCCCCE
  AA: SHSHVGYTLSYKAQSSCCHFMVKLLDDGTFMIPGEKVAHTSLDALVTFHQQKPIEPRREL
              70        80        90       100       110       120


Conf: 005787789999992444210444444357999999989999854344455899500245
Pred: ECCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
  AA: LTQPCRQKDPANVDYEDLFLYSNAVAEEAACPVSAPEEASPKPVLCHQSKERKPSAEMNR
             130       140       150       160       170       180


Conf: 884565779999999503334321027779546985531001122236878777767864
Pred: CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
  AA: ITTKEATSSCPPKSPLGETRQKLWRSLKMLPERGQRVRQQLKSHLATVNLSSLLDVRRST
             190       200       210       220       230       240


Conf: 468999999999999999999999899866678899999999989999862235777886
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
  AA: VISGPGTGKGSQDHSGDPTSGDRGYTDPCVATSLKSPSQPQAPKDRKVPTRKAERSVSCI
             250       260       270       280       290       300


Conf: 6889985256788876217999877779899888998866799999999999
Pred: CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
  AA: EVTPGDRSWHQMVVRALSSQESKPEHQGLAEPENDQLPEEYQQPPPFAPGYC
             310       320       330       340       350

Show Conservation Score by AL2CO

1     M      -1.000    *
2     T      -1.000    *
3     E      -1.000    *
4     A      -1.000    *
5     G      -1.000    *
6     K      -1.000    *
7     L      -1.000    *
8     P      -1.000    *
9     L      -1.000    *
10    P      -1.000    *
11    L      -1.000    *
12    P      -1.000    *
13    P      -1.000    *
14    R      -1.000    *
15    L       0.271
16    D      -0.236
17    W       3.035
18    F       1.402
19    V      -0.327
20    H       0.436
21    T       0.782
22    Q       1.674
23    M       0.103
24    G      -0.578
25    Q      -0.522
26    L       0.665
27    A      -0.291
28    Q      -0.303
29    D      -0.183
30    G       0.025
31    V       0.493
32    P       1.399
33    E      -0.489
34    W       3.704
35    F       1.739
36    H       0.580
37    G       2.392
38    A      -0.240
39    I       1.274
40    S       1.669
41    R       3.704
42    E      -0.284
43    D       0.098
44    A       1.748
45    E       3.014
46    N      -0.069
47    L       0.431
48    L       1.880
49    E      -0.313
50    S      -0.410
51    Q       1.122
52    P      -0.351
53    L      -0.267
54    G       3.249
55    S      -0.134
56    F       2.739
57    L       2.324
58    I       1.805
59    R       2.808
60    V      -0.023
61    S       1.156
62    H       0.617
63    S       0.462
64    H      -0.023
65    V      -0.624
66    G       0.817
67    Y       2.299
68    T       0.591
69    L       1.987
70    S       1.546
71    Y       1.133
72    K       0.683
73    A      -0.162
74    Q      -0.292
75    S       0.108
76    S       0.454
77    C       1.072
78    C       0.299
79    H       2.261
80    F       1.183
81    M       0.242
82    V       1.386
83    K      -0.199
84    L      -0.345
85    L       0.102
86    D      -0.447
87    D      -0.128
88    G       0.565
89    T      -0.314
90    F       0.672
91    M      -0.313
92    I       1.303
93    P      -0.285
94    G       1.014
95    E       0.882
96    K      -0.498
97    V      -0.698
98    A      -0.497
99    H       1.634
100   T      -0.631
101   S       0.296
102   L       2.894
103   D      -0.725
104   A       0.424
105   L       2.903
106   V       1.337
107   T      -0.269
108   F       1.515
109   H       1.846
110   Q       0.381
111   Q      -0.739
112   K      -0.520
113   P       0.020
114   I       0.907
115   E      -0.446
116   P       0.516
117   R      -0.085
118   R      -0.643
119   E       0.281
120   L      -0.412
121   L       1.809
122   T       0.228
123   Q      -0.582
124   P       0.518
125   C       0.237
126   R      -0.373
127   Q       0.131
128   K      -0.694
129   D      -0.647
130   P      -0.552
131   A      -0.629
132   N      -0.976
133   V      -0.880
134   D      -0.213
135   Y      -0.508
136   E      -0.782
137   D      -0.455
138   L      -0.470
139   F      -0.818
140   L      -0.581
141   Y      -1.019
142   S      -0.673
143   N      -0.923
144   A      -0.742
145   V      -0.736
146   A      -0.706
147   E      -0.777
148   E      -0.618
149   A      -0.971
150   A      -0.817
151   C      -0.904
152   P      -0.600
153   V      -0.994
154   S      -0.933
155   A      -0.787
156   P      -0.893
157   E      -0.815
158   E      -0.769
159   A      -0.587
160   S      -0.619
161   P      -0.699
162   K      -0.985
163   P      -0.690
164   V      -0.901
165   L      -1.045
166   C      -0.747
167   H      -0.781
168   Q      -1.084
169   S      -0.711
170   K      -0.949
171   E      -0.826
172   R      -0.744
173   K      -0.945
174   P      -0.782
175   S      -0.691
176   A      -0.640
177   E      -0.832
178   M      -0.641
179   N      -1.031
180   R      -0.805
181   I      -0.811
182   T      -0.785
183   T      -0.807
184   K      -0.680
185   E      -0.698
186   A      -0.665
187   T      -0.499
188   S      -0.444
189   S      -0.726
190   C      -0.854
191   P      -0.707
192   P      -0.896
193   K      -0.199
194   S      -0.632
195   P       0.149
196   L      -0.469
197   G      -0.308
198   E      -0.182
199   T      -0.548
200   R      -0.724
201   Q      -0.291
202   K      -0.719
203   L      -0.142
204   W      -0.375
205   R      -0.375
206   S      -0.191
207   L      -0.340
208   K      -0.165
209   M      -0.551
210   L       0.000
211   P       0.618
212   E      -0.530
213   R      -0.328
214   G      -0.595
215   Q      -0.229
216   R      -0.379
217   V      -0.435
218   R      -0.558
219   Q       0.025
220   Q      -0.618
221   L      -0.292
222   K      -0.602
223   S      -0.127
224   H      -0.578
225   L       0.020
226   A      -0.661
227   T      -0.463
228   V      -0.451
229   N      -0.187
230   L      -0.745
231   S      -0.454
232   S      -0.070
233   L      -0.266
234   L      -0.769
235   D      -0.508
236   V      -0.748
237   R      -0.537
238   R      -0.875
239   S      -0.529
240   T      -0.841
241   V      -0.683
242   I      -0.565
243   S      -0.463
244   G      -0.461
245   P       0.257
246   G      -0.619
247   T      -0.679
248   G      -0.830
249   K      -1.000    *
250   G      -1.000    *
251   S      -1.000    *
252   Q      -1.000    *
253   D      -1.000    *
254   H      -1.000    *
255   S      -1.000    *
256   G      -1.000    *
257   D      -1.000    *
258   P      -1.000    *
259   T      -1.000    *
260   S      -1.000    *
261   G      -1.000    *
262   D      -1.000    *
263   R      -1.000    *
264   G      -1.000    *
265   Y      -1.000    *
266   T      -1.000    *
267   D      -1.000    *
268   P      -1.000    *
269   C      -1.000    *
270   V      -1.000    *
271   A      -1.000    *
272   T      -1.000    *
273   S      -1.000    *
274   L      -1.000    *
275   K      -1.000    *
276   S      -1.000    *
277   P      -1.000    *
278   S      -1.000    *
279   Q      -1.000    *
280   P      -1.000    *
281   Q      -1.000    *
282   A      -1.000    *
283   P      -1.000    *
284   K      -1.000    *
285   D      -1.000    *
286   R      -1.000    *
287   K      -1.000    *
288   V      -1.000    *
289   P      -1.000    *
290   T      -1.000    *
291   R      -1.000    *
292   K      -1.000    *
293   A      -1.000    *
294   E      -1.000    *
295   R      -1.000    *
296   S      -1.000    *
297   V      -1.000    *
298   S      -1.000    *
299   C      -1.000    *
300   I      -1.000    *
301   E      -1.000    *
302   V      -1.000    *
303   T      -1.000    *
304   P      -1.000    *
305   G      -1.000    *
306   D      -1.000    *
307   R      -1.000    *
308   S      -1.000    *
309   W      -1.000    *
310   H      -1.000    *
311   Q      -1.000    *
312   M      -1.000    *
313   V      -1.000    *
314   V      -1.000    *
315   R      -1.000    *
316   A      -1.000    *
317   L      -1.000    *
318   S      -1.000    *
319   S      -1.000    *
320   Q      -1.000    *
321   E      -1.000    *
322   S      -1.000    *
323   K      -1.000    *
324   P      -1.000    *
325   E      -1.000    *
326   H      -1.000    *
327   Q      -1.000    *
328   G      -1.000    *
329   L      -1.000    *
330   A      -1.000    *
331   E      -1.000    *
332   P      -1.000    *
333   E      -1.000    *
334   N      -1.000    *
335   D      -1.000    *
336   Q      -1.000    *
337   L      -1.000    *
338   P      -1.000    *
339   E      -1.000    *
340   E      -1.000    *
341   Y      -1.000    *
342   Q      -1.000    *
343   Q      -1.000    *
344   P      -1.000    *
345   P      -1.000    *
346   P      -1.000    *
347   F      -1.000    *
348   A      -1.000    *
349   P      -1.000    *
350   G      -1.000    *
351   Y      -1.000    *
352   C      -1.000    *
* gap fraction no less than  0.50; conservation set to M-S
  M: mean;  S: standard deviation

al2co - The parameters are:

Input alignment file - 217.paln
Output conservation - STDOUT
Weighting scheme - independent-count based
Conservation calculation method - entropy-based
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation -  0.50

        10         20         30         40         50         60 MTEAGKLPLP LPPRLDWFVH TQMGQLAQDG VPEWFHGAIS REDAENLLES QPLGSFLIRV 
        70         80         90        100        110        120 SHSHVGYTLS YKAQSSCCHF MVKLLDDGTF MIPGEKVAHT SLDALVTFHQ QKPIEPRREL 
       130        140        150        160        170        180 LTQPCRQKDP ANVDYEDLFL YSNAVAEEAA CPVSAPEEAS PKPVLCHQSK ERKPSAEMNR 
       190        200        210        220        230        240 
ITTKEATSSC PPKSPLGETR QKLWRSLKML PERGQRVRQQ LKSHLATVNL SSLLDVRRST 
       250        260        270        280        290        300 VISGPGTGKG SQDHSGDPTS GDRGYTDPCV ATSLKSPSQP QAPKDRKVPT RKAERSVSCI 
       310        320        330        340        350            EVTPGDRSWH QMVVRALSSQ ESKPEHQGLA EPENDQLPEE YQQPPPFAPG YC

Not Available

ALX plays a role in CD28 mediated up-regulation of the IL-2 promoter, which is a key event in T cell activation in the immune response. ALX is located in both the nucleus and the cytoplasm and nuclear pool of ALX is rapidly depleted in response to TCR and CD28 signaling. Shapiro et al. found a NES located at the C-terminal is responsible for the removal of ALX from the nucleus. The C-terminal also contain sequences for nuclear entry, although no apparent NLS was found.

[1]. "The carboxyl-terminal segment of the adaptor protein ALX directs its nuclear export during T cell activation."
Shapiro MJ, Chen YY, Shapiro VS (2005) J Biol Chem, 280:38242-6 PubMed

Accurate identification of NESs is difficult because many sequences in the genome match the NES consensus. Therefore, some published NESs may be mistakenly identified. Please help us improve the accuracy of NESdb by providing either a positive or negative flag for the NES in this entry. Supporting comments are required to process the flag.

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