Aryl hydrocarbon receptor nuclear translocator-like protein 1
UniProt
Show FASTA Format
>gi|6680732|ref|NP_031515.1| aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform 1 [Mus musculus]
MADQRMDISSTISDFMSPGPTDLLSGSLGTSGVDCNRKRKGSATDYQESMDTDKDDPHGRLEYAEHQGRI
KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPT
FLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSS
SDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFASTCSKKKADRKSFC
TIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHSHMVPQPANGEIRVKSMEYVSRHAIDGKF
VFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW
FSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTAPPHSMDSMLPSGEGGPKRTHPTVPGIPGGTRA
GAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKILNGGTPDIPSTGLLPGQAQE
TPGYPYSDSSSILGENPHIGIDMIDNDQGSSSPSNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL
Show Domain Info by CDD
Show Secondary Structure by PSIPRED
# PSIPRED HFORMAT (PSIPRED V3.2)
Conf: 987665335446899999997766788888875468668899887568678899999997
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: MADQRMDISSTISDFMSPGPTDLLSGSLGTSGVDCNRKRKGSATDYQESMDTDKDDPHGR
10 20 30 40 50 60
Conf: 301110000000211124566665555678799975056778301369740468899998
Pred: CHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
AA: LEYAEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ
70 80 90 100 110 120
Conf: 753203899999999877888884678789886138418999628842899903641023
Pred: HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCEEEEECCCCCCC
AA: HMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL
130 140 150 160 170 180
Conf: 655631235222211398606777654226999986672002469840468999986335
Pred: CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC
190 200 210 220 230 240
Conf: 798703275521289996421244777675423799875999703633589999899887
Pred: CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCC
AA: SGARRSFFCRMKCNRPSVKVEDKDFASTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDE
250 260 270 280 290 300
Conf: 899899988703699842445677789999986645752023102696299980321332
Pred: CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCHHHH
AA: DNEPDNEGCNLSCLVAIGRLHSHMVPQPANGEIRVKSMEYVSRHAIDGKFVFVDQRATAI
310 320 330 340 350 360
Conf: 025761103955122346585246799999999708822020243463299479993211
Pred: HCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECEEEEEEECCCCEEEEEECC
AA: LAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW
370 380 390 400 410 420
Conf: 002367777320999514034112236899989888899998899898989999888999
Pred: CCCCCCCCCCEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: FSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTAPPHSMDSMLPSGEGGPKRTHPT
430 440 450 460 470 480
Conf: 899897643354872045566666431037999999899999888999999989998655
Pred: CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: VPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKI
490 500 510 520 530 540
Conf: 789999989887768988899998899999888999998776667999999999314678
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
AA: LNGGTPDIPSTGLLPGQAQETPGYPYSDSSSILGENPHIGIDMIDNDQGSSSPSNDEAAM
550 560 570 580 590 600
Conf: 99768887306998976779999999
Pred: HHHHHHHHHCCCCCCCCCCCCCCCCC
AA: AVIMSLLEADAGLGGPVDFSDLPWPL
610 620
Show Conservation Score by AL2CO
1 M -1.000 *
2 A -1.000 *
3 D -1.000 *
4 Q -1.000 *
5 R -1.000 *
6 M -1.000 *
7 D -1.000 *
8 I -1.000 *
9 S -1.000 *
10 S -1.000 *
11 T -1.000 *
12 I -1.000 *
13 S -1.000 *
14 D -1.000 *
15 F -1.000 *
16 M -1.000 *
17 S -1.000 *
18 P -1.000 *
19 G -1.000 *
20 P -1.000 *
21 T -1.000 *
22 D -1.000 *
23 L -1.000 *
24 L -1.000 *
25 S -1.000 *
26 G -1.000 *
27 S -1.000 *
28 L -1.000 *
29 G -1.000 *
30 T -1.000 *
31 S -1.000 *
32 G -1.000 *
33 V -1.000 *
34 D -1.000 *
35 C -1.000 *
36 N -1.000 *
37 R -1.000 *
38 K -1.000 *
39 R -1.000 *
40 K -1.000 *
41 G -1.000 *
42 S -1.000 *
43 A -1.000 *
44 T -1.000 *
45 D -1.000 *
46 Y -1.000 *
47 Q -1.000 *
48 E -1.000 *
49 S -1.000 *
50 M -1.000 *
51 D -1.000 *
52 T -1.000 *
53 D -1.000 *
54 K -1.000 *
55 D -1.000 *
56 D -1.000 *
57 P -1.000 *
58 H -1.000 *
59 G -1.000 *
60 R -1.000 *
61 L -1.000 *
62 E -0.629
63 Y -0.992
64 A -0.507
65 E -0.378
66 H -0.790
67 Q -0.491
68 G -0.763
69 R -0.263
70 I -0.469
71 K -0.319
72 N -0.495
73 A -0.151
74 R 1.399
75 E 0.601
76 A 0.320
77 H 1.194
78 S 1.194
79 Q 0.686
80 I 1.032
81 E 1.662
82 K 2.555
83 R 0.564
84 R 3.034
85 R 3.175
86 D 0.811
87 K 2.078
88 M 1.682
89 N 1.800
90 S -0.540
91 F 0.628
92 I 1.442
93 D -0.678
94 E 1.051
95 L 3.053
96 A 1.600
97 S -0.150
98 L 0.258
99 V 1.875
100 P 2.775
101 T 0.112
102 C 0.686
103 N -0.340
104 A 0.340
105 M 0.067
106 S -0.088
107 R 0.226
108 K 0.988
109 L 1.635
110 D 3.609
111 K 3.609
112 L 1.810
113 T 2.179
114 V 2.585
115 L 1.755
116 R 1.361
117 M 0.690
118 A 1.193
119 V 1.040
120 Q 0.281
121 H 1.983
122 M 1.471
123 K 0.987
124 T -0.175
125 L 0.144
126 R -0.422
127 G -0.314
128 A -0.548
129 T -0.414
130 N -0.395
131 P -0.819
132 Y -1.006
133 T -0.770
134 E -0.662
135 A -0.562
136 N -0.565
137 Y -0.930
138 K -0.262
139 P -0.213
140 T -0.271
141 F -0.684
142 L -0.564
143 S -0.772
144 D -0.549
145 D -0.297
146 E 0.203
147 L 0.479
148 K 0.149
149 H -0.269
150 L 0.199
151 I 0.659
152 L 1.041
153 R 0.901
154 A 0.899
155 A 0.652
156 D 0.996
157 G 2.418
158 F 2.535
159 L 0.791
160 F 0.677
161 V 1.529
162 V 0.838
163 G -0.008
164 C 0.457
165 D 1.361
166 R 0.079
167 G 2.783
168 K -0.026
169 I 1.257
170 L 0.817
171 F 2.389
172 V 0.888
173 S 2.530
174 E 1.250
175 S 1.938
176 V 1.747
177 F 0.105
178 K -0.347
179 I -0.101
180 L 2.058
181 N 0.270
182 Y 0.398
183 S -0.220
184 Q 1.285
185 N -0.270
186 D 0.937
187 L 1.519
188 I 0.100
189 G 1.053
190 Q -0.090
191 S 1.091
192 L 1.153
193 F 1.822
194 D 1.203
195 Y 0.149
196 L 0.610
197 H 1.767
198 P 0.516
199 K -0.421
200 D 2.505
201 I 0.061
202 A -0.231
203 K 0.891
204 V 0.947
205 K -0.157
206 E 0.330
207 Q 0.324
208 L 2.629
209 S -0.041
210 S -0.767
211 S -0.546
212 D -0.645
213 T -0.518
214 A -0.791
215 P -0.653
216 R -0.628
217 E -0.690
218 R -0.856
219 L -0.831
220 I -0.783
221 D -0.580
222 A -0.760
223 K -0.680
224 T -0.595
225 G -0.484
226 L -1.000 *
227 P -0.709
228 V -0.519
229 K -0.600
230 T -0.448
231 D -0.229
232 I -0.694
233 T -0.554
234 P -0.701
235 G -0.550
236 P -0.862
237 S -0.806
238 R -0.566
239 L -0.634
240 C -0.421
241 S -0.854
242 G -0.304
243 A -0.629
244 R -0.501
245 R -0.081
246 S -0.365
247 F 1.118
248 F -0.218
249 C -0.111
250 R 1.079
251 M 0.091
252 K 0.120
253 C -0.443
254 N -0.325
255 R -0.580
256 P -0.590
257 S -0.784
258 V -0.850
259 K -0.654
260 V -0.863
261 E -0.663
262 D -0.869
263 K -0.825
264 D -0.609
265 F -0.747
266 A -0.733
267 S -0.745
268 T -0.770
269 C -0.695
270 S -0.559
271 K -0.454
272 K -0.376
273 K -0.881
274 A -0.906
275 D -0.641
276 R -0.879
277 K -0.568
278 S -0.658
279 F 0.224
280 C -0.754
281 T -0.279
282 I 0.017
283 H -0.398
284 S -0.236
285 T -0.383
286 G 0.334
287 Y -0.412
288 L -0.657
289 K -0.372
290 S -0.769
291 W -0.882
292 P -0.815
293 P -0.689
294 T -0.814
295 K -0.938
296 M -0.967
297 G -0.775
298 L -0.720
299 D -0.887
300 E -0.863
301 D -0.788
302 N -0.756
303 E -0.784
304 P -0.898
305 D -0.923
306 N -0.899
307 E -0.872
308 G -0.689
309 C -0.787
310 N -0.940
311 L -0.828
312 S -0.881
313 C -0.033
314 L 0.110
315 V 0.512
316 A -0.176
317 I 0.194
318 G -0.017
319 R -0.120
320 L -0.008
321 H -0.666
322 S -0.583
323 H -0.534
324 M -0.556
325 V -0.242
326 P -0.042
327 Q -0.535
328 P -0.345
329 A -0.446
330 N -0.675
331 G -0.856
332 E -0.484
333 I -0.495
334 R -0.608
335 V -0.503
336 K -0.650
337 S -0.635
338 M -0.842
339 E 0.290
340 Y 2.578
341 V 0.625
342 S 1.148
343 R 2.336
344 H 0.580
345 A 0.721
346 I -0.226
347 D 1.713
348 G 1.053
349 K 0.379
350 F 0.797
351 V 0.962
352 F 0.997
353 V 0.958
354 D 2.846
355 Q -0.170
356 R 1.620
357 A 0.892
358 T -0.347
359 A -0.543
360 I 0.700
361 L 0.892
362 A 1.493
363 Y 1.291
364 L -0.624
365 P 1.151
366 Q -0.112
367 E 2.092
368 L 2.102
369 L 0.947
370 G 0.850
371 T 0.702
372 S 0.358
373 C 0.094
374 Y 1.672
375 E 0.402
376 Y 1.416
377 F 0.347
378 H 2.915
379 Q -0.229
380 D -0.183
381 D 3.382
382 I -0.698
383 G -0.778
384 H -0.503
385 L 1.144
386 A -0.396
387 E -0.598
388 C -0.197
389 H 0.987
390 R -0.412
391 Q -0.243
392 V 0.467
393 L 1.207
394 Q -0.025
395 T -0.712
396 R 0.236
397 E 1.130
398 K 0.299
399 I 0.079
400 T -0.580
401 T 1.826
402 N -0.796
403 C -0.527
404 Y 2.313
405 K 2.114
406 F 0.858
407 K 0.809
408 I -0.084
409 K 0.923
410 D -0.320
411 G 0.652
412 S -0.000
413 F 1.203
414 I 0.930
415 T 0.307
416 L 0.828
417 R 0.408
418 S 1.183
419 R -0.147
420 W 0.343
421 F 0.561
422 S 0.083
423 F 1.093
424 M -0.226
425 N 1.630
426 P 0.712
427 W 0.942
428 T 1.262
429 K -0.088
430 E 0.401
431 V 0.161
432 E 1.007
433 Y 0.730
434 I 1.618
435 V 2.069
436 S 1.284
437 T 0.789
438 N 2.323
439 T -0.198
440 V 0.190
441 V 0.926
442 L -0.110
443 A -0.672
444 N -0.735
445 V -0.709
446 L -0.911
447 E -0.669
448 G -0.691
449 G -0.792
450 D -0.695
451 P -0.577
452 T -0.797
453 F -0.968
454 P -0.906
455 Q -0.720
456 L -0.879
457 T -0.869
458 A -0.747
459 P -0.727
460 P -0.658
461 H -0.862
462 S -0.706
463 M -1.015
464 D -0.981
465 S -0.950
466 M -0.940
467 L -0.919
468 P -0.765
469 S -0.877
470 G -0.717
471 E -0.746
472 G -0.867
473 G -0.798
474 P -0.894
475 K -0.729
476 R -0.801
477 T -0.889
478 H -0.989
479 P -0.899
480 T -1.011
481 V -0.780
482 P -0.795
483 G -0.728
484 I -0.955
485 P -0.890
486 G -0.841
487 G -0.697
488 T -0.834
489 R -0.894
490 A -0.842
491 G -0.691
492 A -0.543
493 G -0.656
494 K -0.752
495 I -0.718
496 G -0.483
497 R -0.615
498 M -0.825
499 I -0.684
500 A -0.804
501 E -0.490
502 E -0.624
503 I -0.749
504 M -0.857
505 E -0.682
506 I -0.910
507 H -0.875
508 R -0.935
509 I -0.929
510 R -0.932
511 G -0.902
512 S -0.778
513 S -0.758
514 P -0.606
515 S -0.792
516 S -0.821
517 C -1.004
518 G -0.824
519 S -0.888
520 S -0.780
521 P -0.820
522 L -0.923
523 N -0.869
524 I -0.984
525 T -0.955
526 S -0.544
527 T -0.808
528 P -1.003
529 P -0.955
530 P -0.799
531 D -0.834
532 A -1.022
533 S -0.887
534 S -0.867
535 P -0.847
536 G -0.709
537 G -0.864
538 K -0.892
539 K -0.762
540 I -0.890
541 L -0.917
542 N -0.908
543 G -0.805
544 G -0.864
545 T -0.767
546 P -0.674
547 D -0.624
548 I -0.824
549 P -0.756
550 S -0.902
551 T -0.903
552 G -0.863
553 L -0.921
554 L -0.898
555 P -0.576
556 G -0.696
557 Q -0.805
558 A -0.784
559 Q -0.709
560 E -0.758
561 T -0.732
562 P -0.716
563 G -0.774
564 Y -0.872
565 P -0.572
566 Y -0.886
567 S -0.650
568 D -0.566
569 S -0.818
570 S -1.000 *
571 S -0.501
572 I -1.000 *
573 L -1.000 *
574 G -1.000 *
575 E -1.000 *
576 N -1.000 *
577 P -1.000 *
578 H -1.000 *
579 I -1.000 *
580 G -1.000 *
581 I -1.000 *
582 D -1.000 *
583 M -1.000 *
584 I -1.000 *
585 D -1.000 *
586 N -1.000 *
587 D -1.000 *
588 Q -1.000 *
589 G -1.000 *
590 S -1.000 *
591 S -1.000 *
592 S -1.000 *
593 P -1.000 *
594 S -1.000 *
595 N -1.000 *
596 D -1.000 *
597 E -1.000 *
598 A -1.000 *
599 A -1.000 *
600 M -1.000 *
601 A -1.000 *
602 V -1.000 *
603 I -1.000 *
604 M -1.000 *
605 S -1.000 *
606 L -1.000 *
607 L -1.000 *
608 E -1.000 *
609 A -1.000 *
610 D -1.000 *
611 A -1.000 *
612 G -1.000 *
613 L -1.000 *
614 G -1.000 *
615 G -1.000 *
616 P -1.000 *
617 V -1.000 *
618 D -1.000 *
619 F -1.000 *
620 S -1.000 *
621 D -1.000 *
622 L -1.000 *
623 P -1.000 *
624 W -1.000 *
625 P -1.000 *
626 L -1.000 *
* gap fraction no less than 0.50; conservation set to M-S
M: mean; S: standard deviation
al2co - The parameters are:
Input alignment file - 219.paln
Output conservation - STDOUT
Weighting scheme - independent-count based
Conservation calculation method - entropy-based
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation - 0.50
10 20 30 40 50 60
MADQRMDISS TISDFMSPGP TDLLSGSLGT SGVDCNRKRK GSATDYQESM DTDKDDPHGR
70 80 90 100 110 120
LEYAEHQGRI KNAREAHSQI EKRRRDKMNS FIDELASLVP TCNAMSRKLD KLTVLRMAVQ
130 140 150 160 170 180
HMKTLRGATN PYTEANYKPT FLSDDELKHL ILRAADGFLF VVGCDRGKIL FVSESVFKIL
190 200 210 220 230 240
NYSQNDLIGQ SLFDYLHPKD IAKVKEQLSS SDTAPRERLI DAKTGLPVKT DITPGPSRLC
250 260 270 280 290 300
SGARRSFFCR MKCNRPSVKV EDKDFASTCS KKKDRKSFCT IHSTGYLKSW PPTKMGLDED
310 320 330 340 350 360
NEPDNEGCNL SCLVAIGRLH SHMVPQPANG EIRVKSMEYV SRHAIDGKFV FVDQRATAIL
370 380 390 400 410 420
AYLPQELLGT SCYEYFHQDD IGHLAECHRQ VLQTREKITT NCYKFKIKDG SFITLRSRWF
430 440 450 460 470 480
SFMNPWTKEV EYIVSTNTVV LANVLEGGDP TFPQLTAPPH SMDSMLPSGE GGPKRTHPTV
490 500 510 520 530 540
PGIPGGTRAG AGKIGRMIAE EIMEIHRIRG SSPSSCGSSP LNITSTPPPD ASSPGGKKIL
550 560 570 580 590 600
NGGTPDIPST GLLPGQAQET PGYPYSDSSS ILGENPHIGI DMIDNDQGSS SPSNDEAAMA
610 620
VIMSLLEADA GLGGPVDFSD LPWPL
BMAL1 is a bHLH-PAS-containing transcription factor that controls the expression of the core clock regulators Per1 and Per2. Kwon et al. showed that BMAL1 possesses both NLS and NES and its shuttling activity is essential for the transactivation and degradation of the CLOCK/BMAL1 heterodimer. Note that the fasta file from NCBI has one extra amino acid than the one from Uniprot.
[1]. "BMAL1 shuttling controls transactivation and degradation of the CLOCK/BMAL1 heterodimer"
Kwon I, Lee J, Chang SH, Jung NC, Lee BJ, Son GH, Kim K, Lee KH. (2006)
Mol Cell Biol,
26:7318-30
PubMed
Accurate identification of NESs is difficult because many sequences in the genome match the NES consensus.
Therefore, some published NESs may be mistakenly identified. Please help us improve the accuracy of NESdb
by providing either a positive or negative flag for the NES in this entry. Supporting comments are required to process the flag.