Show FASTA Format
>gi|418612|sp|Q04584.1|ZYX_CHICK RecName: Full=Zyxin
MASPGTPGTRMTTTVSINISTPSFYNPQKKFAPVVAPKPKVNPFKTGGTSESSQPQPPGTGAQRAQIGRV
GEIPVSVTAEELPLPPPPPPGEELSFSSNCAFPPPPPPFEEPFPPAPDEAFPSPPPPPPPMFDEGPALQI
PPGSTGSVEKPLAPKAHVEISSAPRDPTPPFPSKFTPKPSGTLSSKPPGLDSTPAPAPWAAPQQRKEPLA
SVPPPPSLPSQPTAKFTPPPVASSPGSKPGATVPMAPSNSTRYPTSLQTQFTAPSPSGPLSRPQPPNFTY
AQQWERPQVQEKPVPTEKSAAVKDMRRPTADPPKGNSPLTMKEVEELELLTQKLMKDMDHPPPVEAATSE
LCGFCRKPLSRTQPAVRALDCLFHVECFTCFKCEKQLQGQQFYNVDEKPFCEDCYAGTLEKCSVCKQTIT
DRMLKATGNSYHPQCFTCVMCHTPLEGASFIVDQANQPHCVDDYHRKYAPRCSVCSEPIMPEPGKDETVR
VVALEKNFHMKCYKCEDCGRPLSIEADENGCFPLDGHVLCMKCHTVRAKTAC
Show Domain Info by CDD
Show Secondary Structure by PSIPRED
# PSIPRED HFORMAT (PSIPRED V3.2)
Conf: 999999997541012458899943587778788889999999999999999999999999
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: MASPGTPGTRMTTTVSINISTPSFYNPQKKFAPVVAPKPKVNPFKTGGTSESSQPQPPGT
10 20 30 40 50 60
Conf: 987897899999998888778999999999986678999999999999999999999998
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: GAQRAQIGRVGEIPVSVTAEELPLPPPPPPGEELSFSSNCAFPPPPPPFEEPFPPAPDEA
70 80 90 100 110 120
Conf: 999999999999999987899999999999999899877777699999999988999999
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: FPSPPPPPPPMFDEGPALQIPPGSTGSVEKPLAPKAHVEISSAPRDPTPPFPSKFTPKPS
130 140 150 160 170 180
Conf: 999999999999999999999989999999899999999999999999999999999999
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: GTLSSKPPGLDSTPAPAPWAAPQQRKEPLASVPPPPSLPSQPTAKFTPPPVASSPGSKPG
190 200 210 220 230 240
Conf: 999999999999998877888999999999999999977655578887668899997552
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: ATVPMAPSNSTRYPTSLQTQFTAPSPSGPLSRPQPPNFTYAQQWERPQVQEKPVPTEKSA
250 260 270 280 290 300
Conf: 124899999999999999886025999999999996249999988746533433588766
Pred: CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
AA: AVKDMRRPTADPPKGNSPLTMKEVEELELLTQKLMKDMDHPPPVEAATSELCGFCRKPLS
310 320 330 340 350 360
Conf: 785113114453345764542222102688321148986544677766876401683689
Pred: CCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHH
AA: RTQPAVRALDCLFHVECFTCFKCEKQLQGQQFYNVDEKPFCEDCYAGTLEKCSVCKQTIT
370 380 390 400 410 420
Conf: 899975098779998522458988899600001899961135853104887777899976
Pred: HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: DRMLKATGNSYHPQCFTCVMCHTPLEGASFIVDQANQPHCVDDYHRKYAPRCSVCSEPIM
430 440 450 460 470 480
Conf: 899997538999736676566544479998899678999513589970254023557653
Pred: CCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
AA: PEPGKDETVRVVALEKNFHMKCYKCEDCGRPLSIEADENGCFPLDGHVLCMKCHTVRAKT
490 500 510 520 530 540
Conf: 09
Pred: HC
AA: AC
Show Conservation Score by AL2CO
1 M -1.000 *
2 A -1.000 *
3 S -1.000 *
4 P -1.000 *
5 G -1.000 *
6 T -1.000 *
7 P -1.000 *
8 G -1.000 *
9 T -1.000 *
10 R -1.000 *
11 M -1.000 *
12 T -1.000 *
13 T -1.000 *
14 T -1.000 *
15 V -1.000 *
16 S -1.000 *
17 I -1.000 *
18 N -1.000 *
19 I -1.000 *
20 S -1.000 *
21 T -1.000 *
22 P -1.000 *
23 S -1.000 *
24 F -1.000 *
25 Y -1.000 *
26 N -1.000 *
27 P -1.000 *
28 Q -1.000 *
29 K -1.000 *
30 K -1.000 *
31 F -1.000 *
32 A -1.000 *
33 P -1.000 *
34 V -1.000 *
35 V -1.000 *
36 A -1.000 *
37 P -1.000 *
38 K -1.000 *
39 P -1.000 *
40 K -1.000 *
41 V -1.000 *
42 N -1.000 *
43 P -1.000 *
44 F -1.000 *
45 K -1.000 *
46 T -1.000 *
47 G -1.000 *
48 G -1.000 *
49 T -1.000 *
50 S -1.000 *
51 E -1.000 *
52 S -1.000 *
53 S -1.000 *
54 Q -1.000 *
55 P -1.000 *
56 Q -1.000 *
57 P -1.000 *
58 P -1.000 *
59 G -1.000 *
60 T -1.000 *
61 G -1.000 *
62 A -1.000 *
63 Q -1.000 *
64 R -1.000 *
65 A -1.000 *
66 Q -1.000 *
67 I -1.000 *
68 G -1.000 *
69 R -1.000 *
70 V -1.000 *
71 G -1.000 *
72 E -1.000 *
73 I -1.000 *
74 P -1.000 *
75 V -1.000 *
76 S -1.000 *
77 V -1.000 *
78 T -1.000 *
79 A -1.000 *
80 E -1.000 *
81 E -1.000 *
82 L -1.000 *
83 P -1.000 *
84 L -1.000 *
85 P -1.000 *
86 P -1.000 *
87 P -1.000 *
88 P -1.000 *
89 P -1.000 *
90 P -1.000 *
91 G -1.000 *
92 E -1.000 *
93 E -1.000 *
94 L -1.000 *
95 S -1.000 *
96 F -1.000 *
97 S -0.340
98 S -0.449
99 N -0.806
100 C -0.579
101 A -0.616
102 F -0.708
103 P -0.502
104 P -0.481
105 P -0.454
106 P -0.503
107 P -0.558
108 P -0.469
109 F -0.833
110 E -0.375
111 E -0.604
112 P -0.582
113 F -0.730
114 P -0.436
115 P -0.408
116 A -0.687
117 P -0.294
118 D -0.702
119 E -0.708
120 A -0.513
121 F -0.824
122 P -0.616
123 S -0.313
124 P -0.225
125 P -0.547
126 P -0.616
127 P -0.607
128 P -0.462
129 P -0.488
130 P -0.625
131 M -0.692
132 F -0.648
133 D -0.609
134 E -0.582
135 G -0.471
136 P -0.604
137 A -0.593
138 L -0.802
139 Q -0.641
140 I -0.622
141 P -0.543
142 P -0.635
143 G -0.639
144 S -0.652
145 T -0.692
146 G -0.444
147 S -0.682
148 V -0.691
149 E -0.713
150 K -0.759
151 P -0.565
152 L -0.784
153 A -0.429
154 P -0.479
155 K -0.548
156 A -0.644
157 H -0.770
158 V -0.668
159 E -0.614
160 I -0.713
161 S -0.726
162 S -0.469
163 A -0.598
164 P -0.687
165 R -0.687
166 D -0.579
167 P -0.629
168 T -0.574
169 P -0.741
170 P -0.643
171 F -0.697
172 P -0.621
173 S -0.528
174 K -0.769
175 F -0.683
176 T -0.798
177 P -0.661
178 K -0.573
179 P -0.488
180 S -0.653
181 G -0.606
182 T -0.750
183 L -0.825
184 S -0.772
185 S -0.543
186 K -0.727
187 P -0.499
188 P -0.665
189 G -0.625
190 L -0.792
191 D -0.814
192 S -0.756
193 T -0.751
194 P -0.509
195 A -0.754
196 P -0.659
197 A -0.676
198 P -0.698
199 W -0.768
200 A -0.679
201 A -0.759
202 P -0.517
203 Q -0.603
204 Q -0.636
205 R -0.650
206 K -0.649
207 E -0.652
208 P -0.777
209 L -0.671
210 A -0.677
211 S -0.645
212 V -0.811
213 P -0.775
214 P -0.557
215 P -0.691
216 P -0.737
217 S -0.764
218 L -0.759
219 P -0.543
220 S -0.803
221 Q -0.763
222 P -0.689
223 T -0.804
224 A -0.770
225 K -0.789
226 F -0.745
227 T -0.622
228 P -0.708
229 P -0.648
230 P -0.647
231 V -0.626
232 A -0.653
233 S -0.690
234 S -0.694
235 P -0.594
236 G -0.570
237 S -0.573
238 K -0.752
239 P -0.684
240 G -0.605
241 A -0.589
242 T -0.705
243 V -0.838
244 P -0.702
245 M -0.785
246 A -0.712
247 P -0.671
248 S -0.587
249 N -0.789
250 S -0.681
251 T -0.811
252 R -0.616
253 Y -0.747
254 P -0.696
255 T -0.856
256 S -0.670
257 L -0.750
258 Q -0.614
259 T -0.704
260 Q -0.669
261 F -0.809
262 T -0.763
263 A -0.696
264 P -0.730
265 S -0.764
266 P -0.530
267 S -0.715
268 G -0.609
269 P -0.502
270 L -0.770
271 S -0.650
272 R -0.690
273 P -0.641
274 Q -0.742
275 P -0.745
276 P -0.672
277 N -0.702
278 F -0.706
279 T -0.807
280 Y -0.826
281 A -0.659
282 Q -0.548
283 Q -0.715
284 W -0.769
285 E -0.564
286 R -0.554
287 P -0.697
288 Q -0.775
289 V -0.724
290 Q -0.698
291 E -0.675
292 K -0.630
293 P -0.518
294 V -0.722
295 P -0.559
296 T -0.812
297 E -0.648
298 K -0.733
299 S -0.657
300 A -0.593
301 A -0.707
302 V -0.691
303 K -0.654
304 D -0.647
305 M -0.823
306 R -0.779
307 R -0.649
308 P -0.752
309 T -0.761
310 A -0.784
311 D -0.728
312 P -0.591
313 P -0.685
314 K -0.679
315 G -0.413
316 N -0.660
317 S -0.706
318 P -0.561
319 L -0.693
320 T -0.585
321 M -0.748
322 K -0.348
323 E -0.313
324 V -0.528
325 E -0.385
326 E 0.062
327 L 0.255
328 E 0.464
329 L -0.651
330 L -0.005
331 T 0.090
332 Q -0.138
333 K -0.404
334 L 0.155
335 M -0.532
336 K -0.308
337 D -0.106
338 M 0.137
339 D -0.557
340 H -0.597
341 P -0.394
342 P -0.196
343 P -0.559
344 V -0.645
345 E -0.393
346 A -0.485
347 A -0.539
348 T -0.266
349 S -0.484
350 E 0.315
351 L -0.447
352 C 2.082
353 G -0.228
354 F -0.431
355 C 3.033
356 R 0.057
357 K 0.038
358 P -0.039
359 L 1.389
360 S -0.442
361 R 0.873
362 T -0.008
363 Q 0.206
364 P -0.352
365 A 0.219
366 V 0.957
367 R 0.277
368 A 2.449
369 L 0.826
370 D 0.647
371 C 0.238
372 L 0.061
373 F 1.430
374 H 3.052
375 V 0.591
376 E -0.131
377 C 1.983
378 F 3.514
379 T 0.204
380 C 3.090
381 F -0.656
382 K -0.262
383 C 2.721
384 E -0.067
385 K -0.314
386 Q -0.284
387 L 1.091
388 Q 0.227
389 G 0.242
390 Q -0.133
391 Q 0.233
392 F 1.551
393 Y 0.793
394 N 0.015
395 V -0.038
396 D 0.079
397 E 0.582
398 K -0.248
399 P 0.478
400 F 0.561
401 C 2.660
402 E 0.683
403 D -0.348
404 C 0.982
405 Y 1.014
406 A -0.363
407 G -0.268
408 T -0.079
409 L 0.761
410 E 0.727
411 K -0.033
412 C 2.952
413 S 0.030
414 V -0.377
415 C 3.514
416 K -0.350
417 Q 0.223
418 T 0.402
419 I 1.507
420 T 0.463
421 D 1.041
422 R 0.023
423 M -0.005
424 L 1.311
425 K 0.601
426 A 2.215
427 T 1.102
428 G 1.113
429 N 0.322
430 S 0.120
431 Y 1.893
432 H 3.011
433 P 0.400
434 Q -0.102
435 C 2.542
436 F 2.211
437 T -0.011
438 C 3.514
439 V 0.122
440 M -0.236
441 C 3.011
442 H -0.269
443 T -0.411
444 P -0.226
445 L 1.821
446 E -0.086
447 G 0.411
448 A -0.147
449 S 0.129
450 F 1.861
451 I 0.703
452 V 0.206
453 D 1.238
454 Q -0.467
455 A -0.191
456 N 0.540
457 Q 0.155
458 P 0.761
459 H 1.032
460 C 3.514
461 V 0.391
462 D -0.240
463 D 1.929
464 Y 1.735
465 H 0.281
466 R 0.157
467 K 0.113
468 Y 0.868
469 A 1.157
470 P 0.551
471 R 0.674
472 C 3.037
473 S -0.139
474 V 0.335
475 C 3.021
476 S -0.336
477 E -0.009
478 P 1.095
479 I 2.343
480 M 0.389
481 P 1.099
482 E -0.025
483 P 0.002
484 G 1.651
485 K 0.361
486 D 1.239
487 E 1.227
488 T 2.181
489 V 1.346
490 R 1.136
491 V 1.874
492 V 0.704
493 A 2.197
494 L 0.888
495 E 0.537
496 K 0.200
497 N 0.066
498 F 1.881
499 H 3.514
500 M 0.366
501 K -0.212
502 C 2.522
503 Y 2.497
504 K 0.435
505 C 3.514
506 E 0.331
507 D 0.357
508 C 3.514
509 G -0.110
510 R -0.315
511 P -0.126
512 L 2.106
513 S 0.374
514 I 0.654
515 E 0.639
516 A 0.569
517 D 0.465
518 E 0.106
519 N -0.152
520 G 0.475
521 C 1.315
522 F 1.420
523 P 0.955
524 L 0.669
525 D 0.377
526 G 0.770
527 H 0.973
528 V 1.455
529 L 1.049
530 C 3.514
531 M 0.024
532 K -0.541
533 C 1.891
534 H 0.985
535 T 0.137
536 V -0.229
537 R 0.391
538 A 0.063
539 K 0.645
540 T 0.491
541 A 0.351
542 C -1.000 *
* gap fraction no less than 0.50; conservation set to M-S
M: mean; S: standard deviation
al2co - The parameters are:
Input alignment file - 23.paln
Output conservation - STDOUT
Weighting scheme - independent-count based
Conservation calculation method - entropy-based
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation - 0.50
10 20 30 40 50 60
MASPGTPGTR MTTTVSINIS TPSFYNPQKK FAPVVAPKPK VNPFKTGGTS ESSQPQPPGT
70 80 90 100 110 120
GAQRAQIGRV GEIPVSVTAE ELPLPPPPPP GEELSFSSNC AFPPPPPPFE EPFPPAPDEA
130 140 150 160 170 180
FPSPPPPPPP MFDEGPALQI PPGSTGSVEK PLAPKAHVEI SSAPRDPTPP FPSKFTPKPS
190 200 210 220 230 240
GTLSSKPPGL DSTPAPAPWA APQQRKEPLA SVPPPPSLPS QPTAKFTPPP VASSPGSKPG
250 260 270 280 290 300
ATVPMAPSNS TRYPTSLQTQ FTAPSPSGPL SRPQPPNFTY AQQWERPQVQ EKPVPTEKSA
310 320 330 340 350 360
AVKDMRRPTA DPPKGNSPLT MKEVEELELL TQKLMKDMDH PPPVEAATSE LCGFCRKPLS
370 380 390 400 410 420
RTQPAVRALD CLFHVECFTC FKCEKQLQGQ QFYNVDEKPF CEDCYAGTLE KCSVCKQTIT
430 440 450 460 470 480
DRMLKATGNS YHPQCFTCVM CHTPLEGASF IVDQANQPHC VDDYHRKYAP RCSVCSEPIM
490 500 510 520 530 540
PEPGKDETVR VVALEKNFHM KCYKCEDCGR PLSIEADENG CFPLDGHVLC MKCHTVRAKT
AC
Zyxin colocalizes with integrin receptors at focal contacts and participate in integrin-dependent signaling. In addition of the prolin-rich array and LIM domains, which are important for protein-protein interaction, Zyxin has an NES domain. Native Zyxin shuttles between the nucleus and the cytoplasm. AA 322-331 is not sufficient for exporting GST.
[1]. "Nuclear-cytoplasmic shuttling of the focal contact protein, zyxin: a potential mechanism for communication between sites of cell adhesion and the nucleus"
Nix, D.A., Beckerle, M.C. (1997)
J Cell Biol,
138:1139-1147
PubMed[2]. "Targeting of zyxin to sites of actin membrane interaction and to the nucleus."
Nix DA, Fradelizi J, Bockholt S, Menichi B, Louvard D, Friederich E, Beckerle MC (2001)
J Biol Chem,
276:34759-67
PubMed
Accurate identification of NESs is difficult because many sequences in the genome match the NES consensus.
Therefore, some published NESs may be mistakenly identified. Please help us improve the accuracy of NESdb
by providing either a positive or negative flag for the NES in this entry. Supporting comments are required to process the flag.