Show FASTA Format
>gi|13124249|sp|Q9Y3I1.1|FBX7_HUMAN RecName: Full=F-box only protein 7
MRLRVRLLKRTWPLEVPETEPTLGHLRSHLRQSLLCTWGYSSNTRFTITLNYKDPLTGDEETLASYGIVS
GDLICLILQDDIPAPNIPSSTDSEHSSLQNNEQPSLATSSNQTSMQDEQPSDSFQGQAAQSGVWNDDSML
GPSQNFEAESIQDNAHMAEGTGFYPSEPMLCSESVEGQVPHSLETLYQSADCSDANDALIVLIHLLMLES
GYIPQGTEAKALSMPEKWKLSGVYKLQYMHPLCEGSSATLTCVPLGNLIVVNATLKINNEIRSVKRLQLL
PESFICKEKLGENVANIYKDLQKLSRLFKDQLVYPLLAFTRQALNLPDVFGLVVLPLELKLRIFRLLDVR
SVLSLSAVCRDLFTASNDPLLWRFLYLRDFRDNTVRVQDTDWKELYRKRHIQRKESPKGRFVMLLPSSTH
TIPFYPNPLHPRPFPSSRLPPGIIGGEYDQRPTLPYVGDPISSLIPGPGETPSQFPPLRPRFDPVGPLPG
PNPILPGRGGPNDRFPFRPSRGRPTDGRLSFM
Show Domain Info by CDD
Show Secondary Structure by PSIPRED
# PSIPRED HFORMAT (PSIPRED V3.2)
Conf: 923201498221226189999889999999975103679999850885526999999982
Pred: CCCCEECCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCH
AA: MRLRVRLLKRTWPLEVPETEPTLGHLRSHLRQSLLCTWGYSSNTRFTITLNYKDPLTGDE
10 20 30 40 50 60
Conf: 467550874696669991289999999999988898787898998545788898787899
Pred: HHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: ETLASYGIVSGDLICLILQDDIPAPNIPSSTDSEHSSLQNNEQPSLATSSNQTSMQDEQP
70 80 90 100 110 120
Conf: 986555221369777898789998886200011000024788899998532344678752
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: SDSFQGQAAQSGVWNDDSMLGPSQNFEAESIQDNAHMAEGTGFYPSEPMLCSESVEGQVP
130 140 150 160 170 180
Conf: 069999743288994256899999998741986579965667997467667308999300
Pred: HHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC
AA: HSLETLYQSADCSDANDALIVLIHLLMLESGYIPQGTEAKALSMPEKWKLSGVYKLQYMH
190 200 210 220 230 240
Conf: 268997099999983994999999833780301145530665100046578641446665
Pred: CCCCCCEEEEEEEECCCEEEEEEEEEECCEEEEEEEEEECCCCCEECCCCCCCHHHHHHH
AA: PLCEGSSATLTCVPLGNLIVVNATLKINNEIRSVKRLQLLPESFICKEKLGENVANIYKD
250 260 270 280 290 300
Conf: 999999943022034899987543999979844673999999940399888899985409
Pred: HHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHH
AA: LQKLSRLFKDQLVYPLLAFTRQALNLPDVFGLVVLPLELKLRIFRLLDVRSVLSLSAVCR
310 320 330 340 350 360
Conf: 888622894899999997518997889999579999998311135897544435999888
Pred: HHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
AA: DLFTASNDPLLWRFLYLRDFRDNTVRVQDTDWKELYRKRHIQRKESPKGRFVMLLPSSTH
370 380 390 400 410 420
Conf: 899999999999999999999320036898999997799888889999999988999999
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: TIPFYPNPLHPRPFPSSRLPPGIIGGEYDQRPTLPYVGDPISSLIPGPGETPSQFPPLRP
430 440 450 460 470 480
Conf: 989999999999999999999999999999999999999999
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: RFDPVGPLPGPNPILPGRGGPNDRFPFRPSRGRPTDGRLSFM
490 500 510 520
Show Conservation Score by AL2CO
1 M 3.569
2 R 2.207
3 L 2.173
4 R 3.044
5 V 1.134
6 R 1.779
7 L -0.759
8 L -0.979
9 K -0.249
10 R 0.609
11 T 0.802
12 W -0.949
13 P -0.374
14 L 1.430
15 E 0.902
16 V 0.443
17 P -0.062
18 E 0.066
19 T -0.245
20 E -0.305
21 P 0.464
22 T 1.072
23 L 1.329
24 G -0.639
25 H 0.432
26 L 1.568
27 R -0.125
28 S -0.795
29 H -0.664
30 L 0.936
31 R -0.293
32 Q -0.579
33 S -0.196
34 L 0.344
35 L -0.075
36 C -0.719
37 T -0.492
38 W -0.703
39 G 0.256
40 Y -0.402
41 S -0.121
42 S -0.358
43 N -0.514
44 T -0.820
45 R -0.722
46 F 0.725
47 T -0.495
48 I 1.059
49 T 2.118
50 L 2.386
51 N 3.569
52 Y 0.565
53 K 1.247
54 D 0.898
55 P 0.150
56 L 2.180
57 T -0.662
58 G 0.371
59 D 0.353
60 E -0.519
61 E -0.251
62 T 0.087
63 L 2.593
64 A -0.493
65 S 0.845
66 Y 0.460
67 G 3.051
68 I 1.238
69 V 0.339
70 S 0.524
71 G 2.585
72 D 2.599
73 L 1.943
74 I 1.744
75 C -0.309
76 L 0.888
77 I -0.073
78 L 0.059
79 Q -0.617
80 D -0.269
81 D -0.698
82 I -0.997
83 P -0.435
84 A -0.602
85 P -0.218
86 N -0.918
87 I -1.029
88 P -0.693
89 S -0.351
90 S -0.768
91 T -0.771
92 D -0.873
93 S -0.900
94 E -0.853
95 H -0.978
96 S -0.843
97 S -0.726
98 L -0.804
99 Q -0.964
100 N -0.849
101 N -0.913
102 E -0.838
103 Q -0.971
104 P -0.509
105 S -0.928
106 L -0.719
107 A -0.593
108 T -0.879
109 S -0.367
110 S -0.852
111 N -0.851
112 Q -0.771
113 T -1.030
114 S -0.869
115 M -1.140
116 Q -1.014
117 D -0.679
118 E -0.553
119 Q -0.530
120 P -0.997
121 S -1.041
122 D -0.775
123 S -0.838
124 F -0.905
125 Q -1.064
126 G -0.758
127 Q -0.994
128 A -0.996
129 A -0.786
130 Q -0.867
131 S -0.995
132 G -0.621
133 V -0.703
134 W -1.023
135 N -1.099
136 D -0.980
137 D -0.659
138 S -0.701
139 M -0.788
140 L -0.974
141 G -0.958
142 P -0.782
143 S -0.762
144 Q -0.747
145 N -0.803
146 F -0.739
147 E -0.547
148 A -0.847
149 E -0.788
150 S -1.137
151 I -1.091
152 Q -0.900
153 D -0.664
154 N -0.842
155 A -1.032
156 H -0.984
157 M -0.917
158 A -0.328
159 E -0.075
160 G -1.033
161 T -0.877
162 G -0.622
163 F -1.112
164 Y -1.330
165 P -0.954
166 S -0.970
167 E 0.124
168 P 0.067
169 M -0.144
170 L -0.198
171 C -0.004
172 S -0.346
173 E -0.238
174 S -0.550
175 V -0.774
176 E -0.838
177 G -0.484
178 Q -1.090
179 V 0.353
180 P 0.544
181 H -1.231
182 S -0.127
183 L 0.950
184 E -0.298
185 T -0.876
186 L 0.779
187 Y -0.485
188 Q -0.937
189 S -0.451
190 A -0.423
191 D -0.425
192 C -0.473
193 S -0.827
194 D -0.398
195 A -0.924
196 N -1.027
197 D 0.100
198 A 0.029
199 L 0.803
200 I -0.051
201 V 0.017
202 L 0.458
203 I 0.727
204 H 1.949
205 L 0.233
206 L 0.893
207 M 1.222
208 L 0.832
209 E 2.506
210 S 0.146
211 G 2.630
212 Y 1.832
213 I -0.077
214 P -0.764
215 Q -0.725
216 G 0.226
217 T -0.698
218 E -0.708
219 A -0.559
220 K -0.299
221 A -0.961
222 L -0.470
223 S -0.978
224 M 0.181
225 P -0.037
226 E -0.794
227 K -0.762
228 W 0.539
229 K 0.070
230 L -0.699
231 S -0.416
232 G -0.513
233 V -0.887
234 Y -0.460
235 K -0.208
236 L 0.620
237 Q -0.840
238 Y 1.145
239 M -0.479
240 H 0.954
241 P 0.308
242 L -0.297
243 C -0.537
244 E -0.714
245 G -0.522
246 S -0.458
247 S -0.661
248 A 0.172
249 T -0.646
250 L 0.974
251 T 0.286
252 C -0.102
253 V 0.101
254 P -0.471
255 L 0.935
256 G 0.778
257 N -0.557
258 L -0.704
259 I 0.827
260 V -0.116
261 V 1.021
262 N 0.122
263 A 1.190
264 T -0.505
265 L 0.698
266 K -0.768
267 I -0.632
268 N -0.185
269 N -0.359
270 E -0.826
271 I -1.265
272 R -0.407
273 S -0.914
274 V 0.107
275 K -0.616
276 R -0.775
277 L 0.162
278 Q -0.433
279 L 0.438
280 L -1.031
281 P -0.690
282 E -1.128
283 S -0.926
284 F -0.367
285 I -0.786
286 C -1.082
287 K -1.504
288 E -0.876
289 K -1.001
290 L -0.914
291 G -0.522
292 E -0.790
293 N -0.233
294 V -0.602
295 A -0.775
296 N -1.066
297 I -1.051
298 Y 0.104
299 K -0.264
300 D -0.093
301 L 0.854
302 Q -0.702
303 K -0.531
304 L 1.311
305 S 1.416
306 R 0.081
307 L -0.333
308 F 0.936
309 K 2.440
310 D 1.701
311 Q -0.683
312 L 1.027
313 V 0.726
314 Y 0.087
315 P 2.120
316 L 1.566
317 L 0.176
318 A 0.010
319 F -0.635
320 T 0.173
321 R 0.189
322 Q -0.154
323 A -0.081
324 L -0.089
325 N 0.761
326 L 0.934
327 P -0.271
328 D -0.266
329 V 0.368
330 F 0.079
331 G 1.016
332 L 1.208
333 V -0.162
334 V -0.475
335 L 2.086
336 P 1.301
337 L -0.669
338 E 2.444
339 L 1.259
340 K 1.317
341 L 0.093
342 R 0.557
343 I 1.539
344 F 1.674
345 R 0.668
346 L -0.514
347 L 2.259
348 D 0.392
349 V 0.496
350 R -0.544
351 S 0.980
352 V 1.688
353 L 0.288
354 S -0.126
355 L 1.436
356 S 0.470
357 A -0.032
358 V 1.192
359 C 2.090
360 R 0.193
361 D 0.700
362 L 1.589
363 F -0.605
364 T -0.927
365 A 0.642
366 S 0.430
367 N -0.053
368 D 0.632
369 P -0.293
370 L -0.330
371 L 2.606
372 W 3.054
373 R 0.912
374 F -0.800
375 L 0.965
376 Y 0.725
377 L -1.130
378 R -0.053
379 D 0.549
380 F 0.689
381 R -0.144
382 D -0.839
383 N -0.944
384 T -1.091
385 V -0.948
386 R -0.922
387 V -1.167
388 Q -1.183
389 D -0.860
390 T -0.956
391 D -0.291
392 W 1.224
393 K 0.904
394 E -0.572
395 L -0.244
396 Y 1.755
397 R -0.302
398 K -0.940
399 R -0.963
400 H -0.423
401 I -0.529
402 Q -1.010
403 R 0.241
404 K -0.382
405 E -0.493
406 S -0.792
407 P -0.742
408 K -0.549
409 G -1.265
410 R -0.429
411 F -1.390
412 V -1.093
413 M -1.122
414 L -1.070
415 L -1.137
416 P -0.328
417 S -1.042
418 S -1.182
419 T -1.057
420 H -1.113
421 T -1.214
422 I -0.816
423 P -0.142
424 F -0.627
425 Y -0.951
426 P -0.711
427 N -0.550
428 P -0.511
429 L -0.634
430 H -0.821
431 P -0.623
432 R -1.185
433 P -0.213
434 F -0.448
435 P -0.155
436 S -0.963
437 S -0.572
438 R -0.662
439 L -0.502
440 P -0.161
441 P 3.569
442 G 0.481
443 I 0.747
444 I 0.693
445 G 3.083
446 G 3.569
447 E 1.208
448 Y 0.818
449 D 2.723
450 Q -0.186
451 R -0.141
452 P 1.630
453 T -0.964
454 L 0.921
455 P 0.379
456 Y -0.610
457 V -0.324
458 G -0.265
459 D -0.225
460 P 1.289
461 I -0.418
462 S -0.649
463 S 0.525
464 L 0.135
465 I -0.225
466 P 0.296
467 G -0.349
468 P -0.433
469 G -0.103
470 E -0.361
471 T -0.851
472 P 0.800
473 S -0.090
474 Q -0.219
475 F -0.312
476 P 0.082
477 P 0.561
478 L -0.089
479 R 0.267
480 P 0.789
481 R 0.841
482 F 1.238
483 D 0.497
484 P 2.418
485 V 0.569
486 G 0.131
487 P 1.716
488 L 0.566
489 P 1.240
490 G 0.741
491 P -0.536
492 N 0.270
493 P -1.000 *
494 I -1.000 *
495 L -1.000 *
496 P 2.624
497 G 0.948
498 R -1.000 *
499 G -1.000 *
500 G -1.000 *
501 P -1.000 *
502 N -1.000 *
503 D -1.000 *
504 R -1.000 *
505 F -1.000 *
506 P 1.021
507 F -0.030
508 R 1.740
509 P 0.601
510 S -0.154
511 R 1.887
512 G 1.635
513 R 0.818
514 P 0.236
515 T -0.109
516 D 1.916
517 G -0.022
518 R 0.863
519 L 0.039
520 S 0.932
521 F 2.186
522 M -1.000 *
* gap fraction no less than 0.50; conservation set to M-S
M: mean; S: standard deviation
al2co - The parameters are:
Input alignment file - 230.paln
Output conservation - STDOUT
Weighting scheme - independent-count based
Conservation calculation method - entropy-based
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation - 0.50
10 20 30 40 50 60
MRLRVRLLKR TWPLEVPETE PTLGHLRSHL RQSLLCTWGY SSNTRFTITL NYKDPLTGDE
70 80 90 100 110 120
ETLASYGIVS GDLICLILQD DIPAPNIPSS TDSEHSSLQN NEQPSLATSS NQTSMQDEQP
130 140 150 160 170 180
SDSFQGQAAQ SGVWNDDSML GPSQNFEAES IQDNAHMAEG TGFYPSEPML CSESVEGQVP
190 200 210 220 230 240
HSLETLYQSA DCSDANDALI VLIHLLMLES GYIPQGTEAK ALSMPEKWKL SGVYKLQYMH
250 260 270 280 290 300
PLCEGSSATL TCVPLGNLIV VNATLKINNE IRSVKRLQLL PESFICKEKL GENVANIYKD
310 320 330 340 350 360
LQKLSRLFKD QLVYPLLAFT RQALNLPDVF GLVVLPLELK LRIFRLLDVR SVLSLSAVCR
370 380 390 400 410 420
DLFTASNDPL LWRFLYLRDF RDNTVRVQDT DWKELYRKRH IQRKESPKGR FVMLLPSSTH
430 440 450 460 470 480
TIPFYPNPLH PRPFPSSRLP PGIIGGEYDQ RPTLPYVGDP ISSLIPGPGE TPSQFPPLRP
490 500 510 520
RFDPVGPLPG PNPILPGRGG PNDRFPFRPS RGRPTDGRLS FM
Fbxo7 is a F-box protein and function as an adapter for E3 ubiquitin ligase Skp1. Fbxo7 was found to be associated with both cancer and neurodegenerative diseases. Fbxo7 is over-expressed in cancer cells. Furthermore, Fbxo7 was found to be enriched in nuclei in cancer cells, it is predominantly cytoplasmic in normal cell. Nelson et al. reported that Fbxo7 is a shuttling protein whose distribution is influenced by cell cycle. They identified one functional NES in the F-box domain. Direct interaction between CRM1 and Fbxo7 was shown by GST-pulldown with recombinant proteins and this interaction was ablated when the F-box was removed. Similar NES was detected in at least two of other F-box proteins. The NES overlaps with Skp1 binding region and Skp1 competes with CRM1 for binding to Fbxo7. Interestingly, a pathogenic point mutation R378G in Parkinson disease promotes cytoplasmic localization.
[1]. "A Competitive binding mechanism between Skp1 and exportin 1 (CRM1) controls the localization of a subset of F-box proteins"
Nelson DE, Laman H. (2011)
J Biol Chem,
286:19804-15
PubMed
Accurate identification of NESs is difficult because many sequences in the genome match the NES consensus.
Therefore, some published NESs may be mistakenly identified. Please help us improve the accuracy of NESdb
by providing either a positive or negative flag for the NES in this entry. Supporting comments are required to process the flag.