Nuclear factor NF-kappa-B p100 subunit
UniProt
Show FASTA Format
>gi|116242678|sp|Q00653.4|NFKB2_HUMAN RecName: Full=Nuclear factor NF-kappa-B p100 subunit; AltName: Full=DNA-binding factor KBF2; AltName: Full=H2TF1; AltName: Full=Lymphocyte translocation chromosome 10 protein; AltName: Full=Nuclear factor of kappa light polypeptide gene enhancer in B-cells 2; AltName: Full=Oncogene Lyt-10; Short=Lyt10; Contains: RecName: Full=Nuclear factor NF-kappa-B p52 subunit
MESCYNPGLDGIIEYDDFKLNSSIVEPKEPAPETADGPYLVIVEQPKQRGFRFRYGCEGPSHGGLPGASS
EKGRKTYPTVKICNYEGPAKIEVDLVTHSDPPRAHAHSLVGKQCSELGICAVSVGPKDMTAQFNNLGVLH
VTKKNMMGTMIQKLQRQRLRSRPQGLTEAEQRELEQEAKELKKVMDLSIVRLRFSAFLRASDGSFSLPLK
PVISQPIHDSKSPGASNLKISRMDKTAGSVRGGDEVYLLCDKVQKDDIEVRFYEDDENGWQAFGDFSPTD
VHKQYAIVFRTPPYHKMKIERPVTVFLQLKRKRGGDVSDSKQFTYYPLVEDKEEVQRKRRKALPTFSQPF
GGGSHMGGGSGGAAGGYGGAGGGGSLGFFPSSLAYSPYQSGAGPMGCYPGGGGGAQMAATVPSRDSGEEA
AEPSAPSRTPQCEPQAPEMLQRAREYNARLFGLAQRSARALLDYGVTADARALLAGQRHLLTAQDENGDT
PLHLAIIHGQTSVIEQIVYVIHHAQDLGVVNLTNHLHQTPLHLAVITGQTSVVSFLLRVGADPALLDRHG
DSAMHLALRAGAGAPELLRALLQSGAPAVPQLLHMPDFEGLYPVHLAVRARSPECLDLLVDSGAEVEATE
RQGGRTALHLATEMEELGLVTHLVTKLRANVNARTFAGNTPLHLAAGLGYPTLTRLLLKAGADIHAENEE
PLCPLPSPPTSDSDSDSEGPEKDTRSSFRGHTPLDLTCSTKVKTLLLNAAQNTMEPPLTPPSPAGPGLSL
GDTALQNLEQLLDGPEAQGSWAELAERLGLRSLVDTYRQTTSPSGSLLRSYELAGGDLAGLLEALSDMGL
EEGVRLLRGPETRDKLPSTAEVKEDSAYGSQSVEQEAEKLGPPPEPPGGLCHGHPQPQVH
Show Domain Info by CDD
Show Secondary Structure by PSIPRED
# PSIPRED HFORMAT (PSIPRED V3.2)
Conf: 988889998886656877789776689999998999991999733685664100134788
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCC
AA: MESCYNPGLDGIIEYDDFKLNSSIVEPKEPAPETADGPYLVIVEQPKQRGFRFRYGCEGP
10 20 30 40 50 60
Conf: 999999989999999988278525656629999947089999987768433347899718
Pred: CCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEE
AA: SHGGLPGASSEKGRKTYPTVKICNYEGPAKIEVDLVTHSDPPRAHAHSLVGKQCSELGIC
70 80 90 100 110 120
Conf: 999278885000157024320267779999999999884259999998999999999995
Pred: EEEECCCCCCEECCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
AA: AVSVGPKDMTAQFNNLGVLHVTKKNMMGTMIQKLQRQRLRSRPQGLTEAEQRELEQEAKE
130 140 150 160 170 180
Conf: 203533442378869998769998344579843566656889999870199625887555
Pred: HHCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCC
AA: LKKVMDLSIVRLRFSAFLRASDGSFSLPLKPVISQPIHDSKSPGASNLKISRMDKTAGSV
190 200 210 220 230 240
Conf: 689548980115668990799886179970231036986630137898319988999989
Pred: CCCCEEEEEECCCCCCCCEEEEEECCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCC
AA: RGGDEVYLLCDKVQKDDIEVRFYEDDENGWQAFGDFSPTDVHKQYAIVFRTPPYHKMKIE
250 260 270 280 290 300
Conf: 767898999957999878896724425998957898741024899779999999999999
Pred: CCEEEEEEEEECCCCCCCCCCCCEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
AA: RPVTVFLQLKRKRGGDVSDSKQFTYYPLVEDKEEVQRKRRKALPTFSQPFGGGSHMGGGS
310 320 330 340 350 360
Conf: 999999999999999886898898899999999998899999987655678998998767
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: GGAAGGYGGAGGGGSLGFFPSSLAYSPYQSGAGPMGCYPGGGGGAQMAATVPSRDSGEEA
370 380 390 400 410 420
Conf: 899999999999998425666668877898979999999998620421257785201211
Pred: CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
AA: AEPSAPSRTPQCEPQAPEMLQRAREYNARLFGLAQRSARALLDYGVTADARALLAGQRHL
430 440 450 460 470 480
Conf: 102354699514588770993789999999863145786556876899932131232994
Pred: CCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCH
AA: LTAQDENGDTPLHLAIIHGQTSVIEQIVYVIHHAQDLGVVNLTNHLHQTPLHLAVITGQT
490 500 510 520 530 540
Conf: 599999947999897432799587899981599757999999449998654467899999
Pred: HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
AA: SVVSFLLRVGADPALLDRHGDSAMHLALRAGAGAPELLRALLQSGAPAVPQLLHMPDFEG
550 560 570 580 590 600
Conf: 846679984299689999997499843542469998331001136531368898841024
Pred: CCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
AA: LYPVHLAVRARSPECLDLLVDSGAEVEATERQGGRTALHLATEMEELGLVTHLVTKLRAN
610 620 630 640 650 660
Conf: 434578999857774038984899999981799765589889999999999999899999
Pred: CCCCCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: VNARTFAGNTPLHLAAGLGYPTLTRLLLKAGADIHAENEEPLCPLPSPPTSDSDSDSEGP
670 680 690 700 710 720
Conf: 868889657899644540168899974135799999999999999988889588999997
Pred: CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
AA: EKDTRSSFRGHTPLDLTCSTKVKTLLLNAAQNTMEPPLTPPSPAGPGLSLGDTALQNLEQ
730 740 750 760 770 780
Conf: 349999999799999994914689852089997599897889449999999999994791
Pred: HCCCCCCCCCHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCH
AA: LLDGPEAQGSWAELAERLGLRSLVDTYRQTTSPSGSLLRSYELAGGDLAGLLEALSDMGL
790 800 810 820 830 840
Conf: 678775029556778999733124689999624644210699999999999999999999
Pred: HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC
AA: EEGVRLLRGPETRDKLPSTAEVKEDSAYGSQSVEQEAEKLGPPPEPPGGLCHGHPQPQVH
850 860 870 880 890 900
Conf:
Pred:
AA:
Show Conservation Score by AL2CO
1 M -1.000 *
2 E -1.000 *
3 S -1.000 *
4 C -1.000 *
5 Y -1.000 *
6 N -1.000 *
7 P -1.000 *
8 G -1.000 *
9 L -1.000 *
10 D -1.000 *
11 G -1.000 *
12 I -1.000 *
13 I -1.000 *
14 E -1.000 *
15 Y -1.000 *
16 D -1.000 *
17 D -1.000 *
18 F -1.000 *
19 K -1.000 *
20 L -1.000 *
21 N -1.000 *
22 S -1.000 *
23 S -1.000 *
24 I -1.000 *
25 V -1.000 *
26 E -1.000 *
27 P -1.000 *
28 K -1.000 *
29 E -1.000 *
30 P -1.000 *
31 A -1.000 *
32 P -1.000 *
33 E -1.000 *
34 T -1.000 *
35 A -1.000 *
36 D -1.000 *
37 G -1.000 *
38 P 1.923
39 Y 0.094
40 L 1.294
41 V -0.711
42 I 1.678
43 V 0.217
44 E 1.606
45 Q 1.248
46 P 2.653
47 K 0.023
48 Q 0.985
49 R 1.809
50 G -1.000 *
51 F 2.159
52 R 3.204
53 F 2.656
54 R 3.204
55 Y 2.660
56 G 0.059
57 C 1.484
58 E 3.204
59 G 1.477
60 P 0.250
61 S 1.495
62 H 2.023
63 G 3.204
64 G 1.215
65 L 1.868
66 P 0.271
67 G 3.204
68 A 0.233
69 S 0.224
70 S 1.481
71 E -0.125
72 K 0.323
73 G 0.562
74 R 0.618
75 K 1.417
76 T 0.590
77 Y 0.799
78 P 2.244
79 T 0.327
80 V 0.982
81 K 0.174
82 I 1.078
83 C -0.287
84 N 0.945
85 Y 1.443
86 E -1.062
87 G 0.784
88 P -0.681
89 A 1.650
90 K 0.650
91 I 1.791
92 E 0.528
93 V 1.207
94 D 0.400
95 L 2.223
96 V 1.055
97 T 1.685
98 H -0.446
99 S -0.422
100 D -0.057
101 P -0.501
102 P -0.653
103 R -1.000 *
104 A -1.000 *
105 H 2.670
106 A 0.584
107 H 2.223
108 S 0.089
109 L 2.684
110 V 1.377
111 G 0.674
112 K 1.489
113 Q -0.184
114 C -1.000 *
115 S -1.000 *
116 E 0.541
117 L -1.000 *
118 G 0.872
119 I -0.482
120 C 0.051
121 A -0.435
122 V -0.116
123 S -0.725
124 V 0.241
125 G 0.222
126 P 0.606
127 K -0.070
128 D 0.326
129 M 0.086
130 T 0.233
131 A 0.700
132 Q -0.363
133 F 3.204
134 N -0.151
135 N 1.279
136 L 1.825
137 G 1.630
138 V 2.271
139 L 1.048
140 H 2.661
141 V 1.807
142 T 1.218
143 K 1.943
144 K 1.913
145 N -0.051
146 M 0.623
147 M -0.702
148 G 0.596
149 T 0.679
150 M 1.226
151 I -0.545
152 Q -0.187
153 K 1.822
154 L 0.597
155 Q 0.003
156 R -0.096
157 Q -0.045
158 R -0.461
159 L -0.219
160 R -0.227
161 S -0.676
162 R -0.607
163 P -0.398
164 Q -0.645
165 G -0.749
166 L 0.269
167 T -0.015
168 E -0.030
169 A -0.512
170 E 0.397
171 Q -0.101
172 R -0.562
173 E -0.779
174 L 1.003
175 E -0.471
176 Q -0.418
177 E 0.103
178 A 0.767
179 K -0.436
180 E -0.626
181 L 0.463
182 K 0.427
183 K 1.883
184 V -0.559
185 M 1.159
186 D 1.408
187 L 2.654
188 S 2.163
189 I 0.525
190 V 2.667
191 R 0.795
192 L 2.184
193 R 0.372
194 F 2.663
195 S 0.595
196 A 1.726
197 F 1.749
198 L 0.389
199 R -0.161
200 A 0.961
201 S 0.136
202 D 0.309
203 G 0.281
204 S -0.726
205 F 0.251
206 S -0.254
207 L 0.629
208 P -0.272
209 L 1.135
210 K -0.157
211 P 1.309
212 V 1.396
213 I 0.895
214 S 2.600
215 Q -0.239
216 P 0.529
217 I 1.975
218 H 0.600
219 D 1.822
220 S 0.204
221 K 1.207
222 S 1.542
223 P 1.517
224 G 0.574
225 A 1.666
226 S 1.097
227 N 0.655
228 L 3.204
229 K 1.138
230 I 2.017
231 S 0.959
232 R 1.602
233 M 0.653
234 D 1.701
235 K 0.427
236 T 0.268
237 A 0.216
238 G 1.621
239 S 0.561
240 V 1.172
241 R -0.282
242 G 2.579
243 G 1.175
244 D 0.944
245 E 2.077
246 V 1.544
247 Y 1.083
248 L 1.176
249 L 1.856
250 C 1.532
251 D 1.240
252 K 1.921
253 V 1.417
254 Q 0.580
255 K 1.996
256 D 1.042
257 D 1.559
258 I 1.618
259 E 0.390
260 V 2.156
261 R 1.739
262 F 2.033
263 Y 1.624
264 E 1.620
265 D 0.746
266 D 0.370
267 E 0.277
268 N 0.137
269 G 0.670
270 W 3.204
271 Q 0.460
272 A 0.743
273 F 0.218
274 G 1.793
275 D 0.112
276 F 2.139
277 S 0.338
278 P 0.931
279 T 0.625
280 D 2.145
281 V 1.951
282 H 2.680
283 K 1.362
284 Q 2.484
285 Y 1.012
286 A 2.278
287 I 1.211
288 V 1.614
289 F 1.186
290 R 1.190
291 T 2.110
292 P 2.098
293 P 0.228
294 Y 1.791
295 H 0.672
296 K 0.277
297 M -0.668
298 K -0.252
299 I 1.421
300 E 0.171
301 R -0.147
302 P 0.540
303 V 0.466
304 T -0.016
305 V 1.795
306 F 0.233
307 L 0.696
308 Q 0.536
309 L 1.662
310 K 0.122
311 R 1.487
312 K 1.009
313 R 0.562
314 G 0.252
315 G -0.343
316 D 0.336
317 V -0.083
318 S 3.204
319 D 0.030
320 S 0.110
321 K -0.047
322 Q 0.179
323 F 1.156
324 T -0.431
325 Y 0.838
326 Y -0.513
327 P 0.484
328 L -0.718
329 V -0.288
330 E -0.608
331 D -0.186
332 K 0.195
333 E 0.214
334 E -0.324
335 V 0.076
336 Q -0.515
337 R -0.260
338 K -0.181
339 R 0.233
340 R 0.058
341 K 0.729
342 A -0.321
343 L -0.041
344 P 0.252
345 T -0.602
346 F -0.338
347 S -0.711
348 Q -0.617
349 P -0.772
350 F -1.011
351 G -0.832
352 G -0.685
353 G -1.036
354 S -0.661
355 H -0.743
356 M -0.919
357 G -0.663
358 G -0.691
359 G -0.849
360 S -0.939
361 G -0.923
362 G -0.825
363 A -1.119
364 A -0.918
365 G -0.892
366 G -0.970
367 Y -0.813
368 G -0.835
369 G -0.793
370 A -1.043
371 G -0.945
372 G -0.933
373 G -1.004
374 G -0.880
375 S -1.096
376 L -0.949
377 G -0.736
378 F -0.862
379 F -0.916
380 P -0.861
381 S -0.639
382 S -1.006
383 L -1.015
384 A -0.947
385 Y -1.049
386 S -0.839
387 P -0.963
388 Y -1.119
389 Q -1.065
390 S -0.736
391 G -0.743
392 A -1.035
393 G -0.976
394 P -1.153
395 M -1.116
396 G -0.935
397 C -1.107
398 Y -1.088
399 P -1.005
400 G -1.187
401 G -0.857
402 G -1.000
403 G -0.897
404 G -1.018
405 A -1.145
406 Q -1.056
407 M -1.046
408 A -0.937
409 A -1.202
410 T -0.957
411 V -1.101
412 P -0.869
413 S -1.143
414 R -1.070
415 D -0.979
416 S -1.103
417 G -1.049
418 E -0.986
419 E -0.975
420 A -0.885
421 A -1.132
422 E -0.964
423 P -0.996
424 S -0.881
425 A -1.063
426 P -1.001
427 S -0.905
428 R -1.032
429 T -1.077
430 P -1.007
431 Q -1.050
432 C -0.992
433 E -1.069
434 P -1.055
435 Q -0.887
436 A -0.987
437 P -1.209
438 E -0.999
439 M -1.102
440 L -1.186
441 Q -0.860
442 R -1.012
443 A -0.824
444 R -1.077
445 E -0.744
446 Y -1.122
447 N -0.727
448 A -0.975
449 R -0.679
450 L -0.835
451 F -1.092
452 G -0.924
453 L -0.971
454 A -0.987
455 Q -1.061
456 R -1.168
457 S -0.584
458 A -0.578
459 R -0.676
460 A -0.802
461 L -0.119
462 L -0.425
463 D -0.375
464 Y -0.899
465 G -0.734
466 V -0.742
467 T -0.538
468 A -0.735
469 D -0.394
470 A -0.458
471 R -0.571
472 A -1.023
473 L -0.692
474 L 0.122
475 A -0.600
476 G -0.775
477 Q -0.843
478 R -0.435
479 H -0.491
480 L -0.702
481 L -0.609
482 T -0.488
483 A -0.763
484 Q -0.759
485 D -0.201
486 E -0.773
487 N -0.500
488 G -0.397
489 D -0.962
490 T -0.231
491 P 0.230
492 L 0.305
493 H -0.021
494 L -0.853
495 A 1.208
496 I 0.406
497 I -0.787
498 H -0.880
499 G -0.186
500 Q -0.236
501 T -0.953
502 S -0.606
503 V -0.380
504 I 0.029
505 E -0.731
506 Q -0.970
507 I 0.417
508 V 0.151
509 Y -0.801
510 V -1.133
511 I -0.372
512 H -0.979
513 H -0.927
514 A -0.784
515 Q -0.526
516 D -0.816
517 L -0.979
518 G -0.606
519 V -0.812
520 V -0.291
521 N 0.136
522 L -0.961
523 T -0.946
524 N 0.172
525 H -0.927
526 L -0.905
527 H -0.437
528 Q -0.846
529 T 0.292
530 P 0.603
531 L 1.211
532 H -0.504
533 L -0.598
534 A 1.869
535 V 0.433
536 I -0.858
537 T -0.855
538 G -0.224
539 Q -0.356
540 T -0.693
541 S -0.383
542 V 0.045
543 V 0.593
544 S -0.453
545 F -0.809
546 L 2.093
547 L 1.097
548 R -0.823
549 V -0.852
550 G -0.179
551 A 0.545
552 D 0.010
553 P 0.294
554 A -0.509
555 L -0.832
556 L -0.826
557 D 0.267
558 R -0.659
559 H -0.943
560 G 0.186
561 D -0.936
562 S 0.500
563 A 0.665
564 M 0.886
565 H -0.047
566 L -0.724
567 A 1.220
568 L -0.233
569 R -0.481
570 A -0.635
571 G -0.622
572 A -0.884
573 G 0.024
574 A -0.639
575 P -0.818
576 E -0.620
577 L -0.050
578 L 0.144
579 R -0.700
580 A -0.721
581 L 1.218
582 L 0.610
583 Q -0.578
584 S -0.751
585 G -0.410
586 A -0.573
587 P -0.547
588 A -0.796
589 V -0.884
590 P -0.948
591 Q -1.016
592 L -0.608
593 L 0.338
594 H -0.161
595 M -1.002
596 P -0.945
597 D -0.215
598 F -0.961
599 E -0.734
600 G 0.276
601 L -0.995
602 Y -0.084
603 P 1.082
604 V 1.250
605 H 0.156
606 L -0.585
607 A 2.119
608 V 0.521
609 R -0.954
610 A -1.050
611 R 0.221
612 S -0.266
613 P -0.940
614 E -0.866
615 C 0.155
616 L 0.448
617 D -0.458
618 L -0.633
619 L 1.821
620 V 0.870
621 D -0.745
622 S -0.650
623 G 0.230
624 A 0.304
625 E -0.308
626 V 0.352
627 E -0.206
628 A -0.889
629 T -0.538
630 E -0.140
631 R -0.855
632 Q -0.964
633 G -0.472
634 G 0.340
635 R -0.791
636 T 1.062
637 A 0.956
638 L 1.958
639 H 0.181
640 L -0.812
641 A 1.910
642 T 0.296
643 E -0.960
644 M -0.920
645 E 0.505
646 E -0.128
647 L -0.663
648 G -0.370
649 L 0.108
650 V 0.380
651 T -0.563
652 H -0.764
653 L 1.836
654 V 0.928
655 T -0.598
656 K -0.087
657 L -0.934
658 R 0.067
659 A 0.019
660 N -0.610
661 V 0.301
662 N -0.136
663 A -0.564
664 R -0.771
665 T 0.127
666 F -0.943
667 A -0.583
668 G 0.515
669 N -1.031
670 T 1.447
671 P 1.191
672 L 1.358
673 H -0.172
674 L -0.769
675 A 1.891
676 A 0.116
677 G -0.999
678 L -0.944
679 G 0.021
680 Y -0.351
681 P -0.935
682 T -0.642
683 L 0.111
684 T 0.262
685 R -0.482
686 L -0.228
687 L 2.479
688 L 0.187
689 K -0.273
690 A -0.625
691 G 0.333
692 A 0.733
693 D -0.159
694 I -0.001
695 H -0.595
696 A -0.664
697 E -0.705
698 N 0.208
699 E -0.929
700 E -0.411
701 P -0.123
702 L -0.941
703 C -0.055
704 P 0.438
705 L 0.317
706 P -0.586
707 S -0.991
708 P -0.527
709 P -0.586
710 T -1.117
711 S -1.055
712 D -0.148
713 S -0.816
714 D -0.617
715 S -0.821
716 D -0.429
717 S -0.565
718 E -0.554
719 G -0.515
720 P -0.864
721 E -0.864
722 K -0.721
723 D -0.525
724 T -0.881
725 R -0.969
726 S -0.507
727 S -0.883
728 F -0.893
729 R -0.789
730 G 0.584
731 H -0.840
732 T 0.782
733 P 1.091
734 L 0.933
735 D 0.043
736 L -0.505
737 T 1.113
738 C -0.123
739 S -0.536
740 T -0.999
741 K -0.137
742 V -0.405
743 K -0.826
744 T -0.921
745 L -0.230
746 L 1.092
747 L -0.462
748 N -0.538
749 A -0.707
750 A -0.736
751 Q -0.654
752 N -0.953
753 T -0.860
754 M -0.901
755 E -1.116
756 P -0.854
757 P -0.675
758 L -0.878
759 T -0.971
760 P -0.948
761 P -0.941
762 S -0.148
763 P -0.718
764 A -1.058
765 G -0.458
766 P -1.066
767 G -0.914
768 L -0.608
769 S -0.871
770 L -0.980
771 G -0.683
772 D -0.898
773 T -1.022
774 A -0.664
775 L -0.482
776 Q -0.859
777 N -0.554
778 L -0.765
779 E -0.860
780 Q -0.662
781 L -0.621
782 L -0.484
783 D -0.560
784 G -0.922
785 P -0.650
786 E -0.603
787 A -0.822
788 Q -0.623
789 G -1.015
790 S -0.218
791 W -0.099
792 A -0.637
793 E -0.641
794 L -0.593
795 A 0.383
796 E -0.552
797 R -0.667
798 L -0.604
799 G 0.152
800 L -0.301
801 R -0.668
802 S -0.797
803 L 0.090
804 V -0.444
805 D -0.879
806 T -0.426
807 Y 0.178
808 R -0.605
809 Q -0.873
810 T -0.872
811 T -0.767
812 S -0.507
813 P -0.051
814 S -0.659
815 G -0.861
816 S -0.879
817 L -0.161
818 L -0.245
819 R -0.798
820 S -0.726
821 Y -0.454
822 E -0.375
823 L -0.349
824 A -0.709
825 G -0.194
826 G -0.683
827 D -0.333
828 L -0.467
829 A -0.695
830 G -0.391
831 L -0.236
832 L -0.222
833 E -0.645
834 A -0.324
835 L 0.508
836 S -0.725
837 D -0.300
838 M -0.539
839 G 0.595
840 L -0.592
841 E -0.696
842 E -0.030
843 G 0.517
844 V -0.023
845 R -0.451
846 L -0.417
847 L 0.297
848 R -0.565
849 G -0.499
850 P -0.674
851 E -0.890
852 T -0.997
853 R -1.075
854 D -0.837
855 K -0.818
856 L -0.683
857 P -0.974
858 S -0.827
859 T -0.629
860 A -1.000 *
861 E -0.601
862 V -0.742
863 K -0.778
864 E -0.765
865 D -1.000 *
866 S -1.000 *
867 A -1.000 *
868 Y -1.000 *
869 G -1.000 *
870 S -1.000 *
871 Q -1.000 *
872 S -1.000 *
873 V -1.000 *
874 E -1.000 *
875 Q -1.000 *
876 E -1.000 *
877 A -1.000 *
878 E -1.000 *
879 K -1.000 *
880 L -1.000 *
881 G -1.000 *
882 P -1.000 *
883 P -1.000 *
884 P -1.000 *
885 E -1.000 *
886 P -1.000 *
887 P -1.000 *
888 G -1.000 *
889 G -1.000 *
890 L -1.000 *
891 C -1.000 *
892 H -1.000 *
893 G -1.000 *
894 H -1.000 *
895 P -1.000 *
896 Q -1.000 *
897 P -1.000 *
898 Q -1.000 *
899 V -1.000 *
900 H -1.000 *
* gap fraction no less than 0.50; conservation set to M-S
M: mean; S: standard deviation
al2co - The parameters are:
Input alignment file - 237.paln
Output conservation - STDOUT
Weighting scheme - independent-count based
Conservation calculation method - entropy-based
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation - 0.50
10 20 30 40 50 60
MESCYNPGLD GIIEYDDFKL NSSIVEPKEP APETADGPYL VIVEQPKQRG FRFRYGCEGP
70 80 90 100 110 120
SHGGLPGASS EKGRKTYPTV KICNYEGPAK IEVDLVTHSD PPRAHAHSLV GKQCSELGIC
130 140 150 160 170 180
AVSVGPKDMT AQFNNLGVLH VTKKNMMGTM IQKLQRQRLR SRPQGLTEAE QRELEQEAKE
190 200 210 220 230 240
LKKVMDLSIV RLRFSAFLRA SDGSFSLPLK PVISQPIHDS KSPGASNLKI SRMDKTAGSV
250 260 270 280 290 300
RGGDEVYLLC DKVQKDDIEV RFYEDDENGW QAFGDFSPTD VHKQYAIVFR TPPYHKMKIE
310 320 330 340 350 360
RPVTVFLQLK RKRGGDVSDS KQFTYYPLVE DKEEVQRKRR KALPTFSQPF GGGSHMGGGS
370 380 390 400 410 420
GGAAGGYGGA GGGGSLGFFP SSLAYSPYQS GAGPMGCYPG GGGGAQMAAT VPSRDSGEEA
430 440 450 460 470 480
AEPSAPSRTP QCEPQAPEML QRAREYNARL FGLAQRSARA LLDYGVTADA RALLAGQRHL
490 500 510 520 530 540
LTAQDENGDT PLHLAIIHGQ TSVIEQIVYV IHHAQDLGVV NLTNHLHQTP LHLAVITGQT
550 560 570 580 590 600
SVVSFLLRVG ADPALLDRHG DSAMHLALRA GAGAPELLRA LLQSGAPAVP QLLHMPDFEG
610 620 630 640 650 660
LYPVHLAVRA RSPECLDLLV DSGAEVEATE RQGGRTALHL ATEMEELGLV THLVTKLRAN
670 680 690 700 710 720
VNARTFAGNT PLHLAAGLGY PTLTRLLLKA GADIHAENEE PLCPLPSPPT SDSDSDSEGP
730 740 750 760 770 780
EKDTRSSFRG HTPLDLTCST KVKTLLLNAA QNTMEPPLTP PSPAGPGLSL GDTALQNLEQ
790 800 810 820 830 840
LLDGPEAQGS WAELAERLGL RSLVDTYRQT TSPSGSLLRS YELAGGDLAG LLEALSDMGL
850 860 870 880 890 900
EEGVRLLRGP ETRDKLPSTA EVKEDSAYGS QSVEQEAEKL GPPPEPPGGL CHGHPQPQVH
p100 is one of the five inhibitory proteins of the NF-κB family. p100 is predominantly in the cytoplasmic. But it accumulates in the nucleus following LMB treatment. Fbxw7α mediates the degradation of GSK3 phosphorylated p100 in the nucleus.
[1]. "Fbxw7alpha- and GSK3-mediated degradation of p100 is a pro-survival mechanism in multiple myeloma."
Busino L, Millman SE, Scotto L, Kyratsous CA, Basrur V, O’Connor O, Hoffmann A, Elenitoba-Johnson KS, Pagano M (2012)
Nat Cell Biol,
14:375-85
PubMed
Accurate identification of NESs is difficult because many sequences in the genome match the NES consensus.
Therefore, some published NESs may be mistakenly identified. Please help us improve the accuracy of NESdb
by providing either a positive or negative flag for the NES in this entry. Supporting comments are required to process the flag.