Cytoplasmic polyadenylation element-binding protein 3
UniProt
*highlighted yellow in the full sequence
L350A/L354A
*shown as underlined residues in the full sequence
350LENSL
354
Show FASTA Format
>gi|81912025|sp|Q7TN99.1|CPEB3_MOUSE RecName: Full=Cytoplasmic polyadenylation element-binding protein 3; Short=CPE-BP3; Short=CPE-binding protein 3; Short=mCPEB-3
MQDDLLMDKSKTQPQSQQQQRQQQQQQQQLQPEPGAAEAPSTPLSSEIPKPEDSSAVPALSPASAPPAPN
GPDKMQMESPLLPGLSFHQPPQQPPPPQEPTAPGASLSPSFGSTWSTGTTNAVEDSFFQGITPVNGTMLF
QNFPHHVNPVFGGTFSPQIGLAQTQHHQQPPPPAPQPPQPAQPPQAQPSQQRRSPASPSQAPYAQRSAAA
YGHQPIMTSKPSSSSAVAAAAAAAAASSASSSWNTHQSVNAAWSAPSNPWGGLQAGRDPRRAVGVGVGVG
VGVPSPLNPISPLKKPFSSNVIAPPKFPRAAPLTSKSWMEDNAFRTDNGNNLLPFQDRSRPYDTFNLHSL
ENSLMDMIRTDHEPLKGKHYPNSGPPMSFADIMWRNHFAGRMGINFHHPGTDNIMALNTRSYGRRRGRSS
LFPFEDAFLDDSHGDQALSSGLSSPTRCQNGERVERYSRKVFVGGLPPDIDEDEITASFRRFGPLVVDWP
HKAESKSYFPPKGYAFLLFQEESSVQALIDACLEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGS
QPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARF
VQLQHNDIDKRVEVKPYVLDDQMCDECQGTRCGGKFAPFFCANVTCLQYYCEYCWASIHSRAGREFHKPL
VKEGGDRPRHVPFRWS
Show Domain Info by CDD
Show Secondary Structure by PSIPRED
# PSIPRED HFORMAT (PSIPRED V3.2)
Conf: 943213776989941577777642013679999999999999999999999998988899
Pred: CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: MQDDLLMDKSKTQPQSQQQQRQQQQQQQQLQPEPGAAEAPSTPLSSEIPKPEDSSAVPAL
10 20 30 40 50 60
Conf: 999999999999998878988899998999999999999999898999999998997767
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: SPASAPPAPNGPDKMQMESPLLPGLSFHQPPQQPPPPQEPTAPGASLSPSFGSTWSTGTT
70 80 90 100 110 120
Conf: 788886577998999765567899999999999889888865656988999999999999
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: NAVEDSFFQGITPVNGTMLFQNFPHHVNPVFGGTFSPQIGLAQTQHHQQPPPPAPQPPQP
130 140 150 160 170 180
Conf: 999999996577899999999532201243699999889999961678766531378899
Pred: CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
AA: AQPPQAQPSQQRRSPASPSQAPYAQRSAAAYGHQPIMTSKPSSSSAVAAAAAAAAASSAS
190 200 210 220 230 240
Conf: 999988888978899999999999999988767764455667888999899999999999
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: SSWNTHQSVNAAWSAPSNPWGGLQAGRDPRRAVGVGVGVGVGVPSPLNPISPLKKPFSSN
250 260 270 280 290 300
Conf: 769999999989999720002556889999977888999998898976530116786523
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHC
AA: VIAPPKFPRAAPLTSKSWMEDNAFRTDNGNNLLPFQDRSRPYDTFNLHSLENSLMDMIRT
310 320 330 340 350 360
Conf: 899998999999999986210100023467777665699987300112234587788898
Pred: CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: DHEPLKGKHYPNSGPPMSFADIMWRNHFAGRMGINFHHPGTDNIMALNTRSYGRRRGRSS
370 380 390 400 410 420
Conf: 876644433477798632345679944479952331100256469899989688998731
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHH
AA: LFPFEDAFLDDSHGDQALSSGLSSPTRCQNGERVERYSRKVFVGGLPPDIDEDEITASFR
430 440 450 460 470 480
Conf: 026905418998678887899843899830025799999995422994999960898799
Pred: CCCCEEEECCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHCCCEEEEEEECCCCCC
AA: RFGPLVVDWPHKAESKSYFPPKGYAFLLFQEESSVQALIDACLEEDGKLYLCVSSPTIKD
490 500 510 520 530 540
Conf: 880453122378884116998779874078757679512789999998631663376202
Pred: CCCEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEC
AA: KPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGID
550 560 570 580 590 600
Conf: 897778877741257201367999986140464408866512314621442222112375
Pred: CCCCCCCCCCCCEEEECCHHHHHHHHHHCEEEEEECCCCCCEEECCCCCCCCCCCCCCCC
AA: TDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHNDIDKRVEVKPYVLDDQMCDECQGT
610 620 630 640 650 660
Conf: 46997774014764166898888988742124212487621158997845886679
Pred: CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: RCGGKFAPFFCANVTCLQYYCEYCWASIHSRAGREFHKPLVKEGGDRPRHVPFRWS
670 680 690 700 710
Show Conservation Score by AL2CO
1 M -1.000 *
2 Q -1.000 *
3 D -1.000 *
4 D -1.000 *
5 L -1.000 *
6 L -1.000 *
7 M -1.000 *
8 D -1.000 *
9 K -1.000 *
10 S -1.000 *
11 K -1.000 *
12 T -1.000 *
13 Q -1.000 *
14 P -1.000 *
15 Q -1.000 *
16 S -1.000 *
17 Q -1.000 *
18 Q -1.000 *
19 Q -1.000 *
20 Q -1.000 *
21 R -1.000 *
22 Q -1.000 *
23 Q -1.000 *
24 Q -1.000 *
25 Q -1.000 *
26 Q -1.000 *
27 Q -1.000 *
28 Q -1.000 *
29 Q -1.000 *
30 L -1.000 *
31 Q -1.000 *
32 P -1.000 *
33 E -1.000 *
34 P -1.000 *
35 G -1.000 *
36 A -1.000 *
37 A -1.000 *
38 E -1.000 *
39 A -1.000 *
40 P -1.000 *
41 S -1.000 *
42 T -1.000 *
43 P -1.000 *
44 L -1.000 *
45 S -1.000 *
46 S -1.000 *
47 E -1.000 *
48 I -1.000 *
49 P -1.000 *
50 K -1.000 *
51 P -1.000 *
52 E -1.000 *
53 D -1.000 *
54 S -1.000 *
55 S -1.000 *
56 A -1.000 *
57 V -1.000 *
58 P -1.000 *
59 A -1.000 *
60 L -1.000 *
61 S -1.000 *
62 P -1.000 *
63 A -1.000 *
64 S -1.000 *
65 A -1.000 *
66 P -1.000 *
67 P -1.000 *
68 A -1.000 *
69 P -1.000 *
70 N -1.000 *
71 G -1.000 *
72 P -1.000 *
73 D -1.000 *
74 K -1.000 *
75 M -1.000 *
76 Q -1.000 *
77 M -1.000 *
78 E -1.000 *
79 S -1.000 *
80 P 0.479
81 L -0.455
82 L 0.224
83 P 0.172
84 G 0.459
85 L -0.299
86 S -0.131
87 F -0.218
88 H -0.281
89 Q -0.192
90 P -0.329
91 P -0.458
92 Q -1.000 *
93 Q -1.000 *
94 P -1.000 *
95 P -1.000 *
96 P -1.000 *
97 P -1.000 *
98 Q -1.000 *
99 E -1.000 *
100 P -1.000 *
101 T -1.000 *
102 A -0.213
103 P -0.272
104 G -0.491
105 A -0.252
106 S -0.141
107 L -0.642
108 S -0.728
109 P 1.000
110 S -0.272
111 F -1.000 *
112 G -1.000 *
113 S -0.186
114 T 0.152
115 W -0.545
116 S -0.108
117 T -0.344
118 G -0.757
119 T -0.582
120 T -0.624
121 N -0.507
122 A -0.477
123 V -0.589
124 E -0.266
125 D -0.154
126 S -0.224
127 F -0.604
128 F -0.527
129 Q 0.427
130 G -0.175
131 I -0.434
132 T -0.331
133 P 0.332
134 V -0.788
135 N -0.506
136 G -0.663
137 T -0.154
138 M -0.101
139 L -0.355
140 F -0.308
141 Q 0.295
142 N 0.441
143 F -0.534
144 P 0.594
145 H -0.293
146 H -0.371
147 V -0.794
148 N -0.435
149 P 0.251
150 V -0.341
151 F -0.476
152 G 0.029
153 G -0.244
154 T -0.336
155 F -0.798
156 S -0.324
157 P -0.357
158 Q -0.469
159 I -0.749
160 G 0.108
161 L -0.578
162 A 0.037
163 Q -0.550
164 T -0.411
165 Q -1.000 *
166 H -0.479
167 H -1.000 *
168 Q -0.824
169 Q -0.652
170 P -0.542
171 P -0.291
172 P -0.606
173 P -0.185
174 A -0.734
175 P -0.655
176 Q -0.554
177 P -1.000 *
178 P -1.000 *
179 Q -1.000 *
180 P -1.000 *
181 A -1.005
182 Q -0.877
183 P -0.624
184 P -0.362
185 Q -0.849
186 A -0.693
187 Q -0.427
188 P -0.508
189 S -0.680
190 Q -0.370
191 Q -0.683
192 R -0.475
193 R -0.984
194 S -0.443
195 P -0.624
196 A -0.740
197 S -0.480
198 P -0.505
199 S -0.946
200 Q -1.009
201 A -1.058
202 P 0.378
203 Y -0.843
204 A -0.829
205 Q -1.035
206 R -0.399
207 S -0.787
208 A -0.608
209 A -0.606
210 A -0.839
211 Y -0.864
212 G -0.294
213 H -0.676
214 Q -0.430
215 P -0.137
216 I -0.731
217 M -0.782
218 T -0.792
219 S -0.748
220 K -0.999
221 P -0.538
222 S -0.760
223 S -0.592
224 S -1.110
225 S -1.003
226 A -0.705
227 V -0.875
228 A -1.097
229 A -1.076
230 A -0.808
231 A -0.781
232 A -1.036
233 A -1.058
234 A -0.768
235 A -0.811
236 A -0.682
237 S -0.786
238 S -0.680
239 A -0.903
240 S -0.826
241 S -0.955
242 S -0.713
243 W -0.584
244 N -0.608
245 T -0.936
246 H -0.751
247 Q -0.597
248 S -0.872
249 V -1.115
250 N -1.016
251 A -0.568
252 A -0.797
253 W -0.991
254 S -0.070
255 A -0.925
256 P -0.346
257 S -1.141
258 N -0.830
259 P -0.614
260 W -0.852
261 G -0.506
262 G -1.077
263 L -0.720
264 Q -0.477
265 A -0.893
266 G -0.544
267 R -0.402
268 D -0.896
269 P -0.610
270 R -0.690
271 R -0.717
272 A -0.465
273 V -0.523
274 G -0.706
275 V -0.738
276 G -0.883
277 V -0.767
278 G -0.549
279 V -0.700
280 G -0.520
281 V -0.801
282 G -0.621
283 V -0.835
284 P -0.290
285 S -0.440
286 P -0.697
287 L -0.814
288 N -0.753
289 P -0.476
290 I -0.459
291 S -0.289
292 P -0.078
293 L -0.576
294 K -0.905
295 K -0.641
296 P -0.726
297 F -0.626
298 S -0.219
299 S -0.475
300 N -0.510
301 V -0.892
302 I -0.960
303 A -0.603
304 P -0.234
305 P -0.398
306 K -0.956
307 F -0.785
308 P -0.573
309 R -0.558
310 A -0.661
311 A -0.655
312 P 0.064
313 L -0.580
314 T -0.569
315 S -0.194
316 K -0.903
317 S -0.337
318 W -0.806
319 M -0.647
320 E -0.895
321 D -0.975
322 N -0.625
323 A -0.880
324 F -0.543
325 R -0.781
326 T -0.637
327 D -0.907
328 N -0.529
329 G -0.937
330 N -0.686
331 N -0.617
332 L -0.618
333 L -0.583
334 P -0.081
335 F -0.588
336 Q -0.596
337 D -0.611
338 R -0.749
339 S -0.264
340 R -0.961
341 P -0.783
342 Y -1.084
343 D -0.529
344 T -0.716
345 F -0.777
346 N -0.738
347 L -0.530
348 H -0.704
349 S -0.189
350 L -0.591
351 E -0.572
352 N -0.322
353 S -0.667
354 L -0.434
355 M -0.880
356 D -0.308
357 M -0.497
358 I -0.778
359 R -0.287
360 T -1.076
361 D -0.576
362 H -0.755
363 E -0.945
364 P -0.741
365 L -1.007
366 K -0.883
367 G -0.755
368 K -1.057
369 H -1.114
370 Y -0.909
371 P -0.725
372 N -0.906
373 S -0.727
374 G -1.182
375 P -0.710
376 P -0.855
377 M -0.970
378 S -0.476
379 F -0.942
380 A -0.777
381 D -1.139
382 I -0.737
383 M -1.010
384 W -1.079
385 R -0.945
386 N -1.069
387 H -0.909
388 F -1.111
389 A -1.337
390 G -0.784
391 R -0.761
392 M -1.286
393 G -1.054
394 I -0.806
395 N -1.057
396 F -1.051
397 H -0.704
398 H -0.657
399 P -0.659
400 G -0.756
401 T -0.737
402 D -0.585
403 N -0.698
404 I -0.797
405 M -1.145
406 A -0.827
407 L -0.851
408 N -0.553
409 T -0.716
410 R -1.076
411 S -0.776
412 Y -0.794
413 G -0.648
414 R -0.847
415 R -0.626
416 R -1.132
417 G -0.817
418 R -0.805
419 S -0.760
420 S -0.698
421 L -0.847
422 F -1.039
423 P -0.309
424 F -0.764
425 E -0.932
426 D -0.493
427 A -0.607
428 F -0.884
429 L -0.433
430 D -0.378
431 D -0.514
432 S -0.695
433 H -0.812
434 G -0.848
435 D -0.742
436 Q -0.748
437 A -0.635
438 L -0.429
439 S -1.053
440 S -0.745
441 G -0.614
442 L -0.568
443 S -0.831
444 S -0.287
445 P -0.102
446 T -0.588
447 R -0.678
448 C -0.619
449 Q -0.541
450 N -0.289
451 G -0.352
452 E -0.856
453 R -0.614
454 V -0.299
455 E -0.346
456 R -0.378
457 Y 0.384
458 S 1.221
459 R 0.332
460 K 1.168
461 V 1.469
462 F 2.242
463 V 1.383
464 G 2.419
465 G 1.755
466 L 1.179
467 P 1.502
468 P 0.458
469 D 0.247
470 I -0.105
471 D 0.475
472 E 0.735
473 D -0.269
474 E -0.259
475 I 1.386
476 T -0.599
477 A -0.187
478 S 0.039
479 F 1.566
480 R -0.007
481 R -0.549
482 F 1.729
483 G 2.022
484 P -0.569
485 L 1.116
486 V -0.512
487 V 1.070
488 D 0.670
489 W 1.380
490 P 1.393
491 H -0.104
492 K 0.693
493 A -0.273
494 E -0.025
495 S -0.007
496 K -0.786
497 S -0.053
498 Y 0.112
499 F -0.526
500 P 0.048
501 P 0.590
502 K 0.281
503 G 2.647
504 Y 1.122
505 A 0.317
506 F 1.165
507 L 0.981
508 L 0.924
509 F 1.403
510 Q 0.033
511 E 0.237
512 E 1.066
513 S -0.577
514 S 0.476
515 V 1.446
516 Q -0.076
517 A -0.450
518 L 1.424
519 I 1.352
520 D -0.278
521 A -0.121
522 C 1.971
523 L -0.614
524 E -0.730
525 E -0.029
526 D -0.306
527 G -0.261
528 K 0.019
529 L -0.093
530 Y 1.282
531 L 0.446
532 C -0.212
533 V 0.765
534 S 0.220
535 S 0.525
536 P 0.227
537 T -0.028
538 I 0.270
539 K -0.132
540 D -0.224
541 K 0.913
542 P -0.390
543 V 1.052
544 Q 1.494
545 I 1.685
546 R 1.188
547 P 2.225
548 W 1.664
549 N 0.033
550 L 1.303
551 S -0.364
552 D 1.089
553 S 0.911
554 D 0.154
555 F 0.742
556 V 0.037
557 M -0.655
558 D -0.614
559 G -0.266
560 S 0.134
561 Q -0.390
562 P -0.565
563 L 0.804
564 D 0.267
565 P 0.057
566 R 0.020
567 K 0.518
568 T 0.633
569 I 0.863
570 F 2.311
571 V 1.223
572 G 2.096
573 G 2.031
574 V 0.818
575 P 1.566
576 R 0.858
577 P 0.892
578 L 0.739
579 R 0.434
580 A 1.367
581 V -0.510
582 E 0.143
583 L 0.942
584 A 0.708
585 M -0.785
586 I 0.034
587 M 1.483
588 D 0.119
589 R 0.321
590 L 0.636
591 Y 2.066
592 G 0.586
593 G -0.285
594 V 1.070
595 C -0.108
596 Y 0.486
597 A 1.265
598 G 0.488
599 I 2.300
600 D 1.747
601 T 0.422
602 D 1.788
603 P 0.460
604 E 0.308
605 L 0.788
606 K 1.006
607 Y 1.619
608 P 1.783
609 K 1.544
610 G 2.941
611 A 1.332
612 G 1.998
613 R 1.760
614 V 1.765
615 A 1.275
616 F 3.567
617 S 0.067
618 N 0.552
619 Q -0.369
620 Q -0.338
621 S 2.508
622 Y 1.488
623 I -0.179
624 A 0.798
625 A 1.605
626 I 1.438
627 S 0.167
628 A 0.556
629 R 0.371
630 F 1.638
631 V 1.402
632 Q 0.412
633 L 1.303
634 Q -0.102
635 H 0.761
636 N -0.212
637 D 0.684
638 I 0.213
639 D -0.221
640 K 2.941
641 R 0.428
642 V 2.072
643 E 2.021
644 V 2.063
645 K 2.012
646 P 3.567
647 Y 2.234
648 V 1.247
649 L 1.712
650 D 1.357
651 D 1.521
652 Q 1.114
653 M -0.057
654 C 3.567
655 D 0.804
656 E 0.085
657 C 3.567
658 Q -0.022
659 G 0.644
660 T -0.482
661 R 0.868
662 C 1.767
663 G -0.027
664 G 0.047
665 K 0.750
666 F 0.709
667 A 1.542
668 P 1.105
669 F 1.595
670 F 2.382
671 C 3.567
672 A 0.802
673 N 0.697
674 V 0.086
675 T -0.131
676 C 2.851
677 L 1.573
678 Q 1.395
679 Y 2.826
680 Y 1.599
681 C 2.826
682 E 1.597
683 Y -0.616
684 C 2.826
685 W 2.826
686 A -0.636
687 S -0.265
688 I -0.254
689 H 2.826
690 S 0.154
691 R -0.331
692 A -0.356
693 G 0.188
694 R -0.060
695 E -0.279
696 F -0.168
697 H 3.567
698 K 0.944
699 P 3.567
700 L 1.896
701 V 0.308
702 K 1.968
703 E 0.761
704 G 0.494
705 G 1.118
706 D 0.201
707 R 0.877
708 P 1.356
709 R 1.975
710 H 0.089
711 V 0.586
712 P 0.965
713 F 1.384
714 R 2.620
715 W 2.606
716 S -1.000 *
* gap fraction no less than 0.50; conservation set to M-S
M: mean; S: standard deviation
al2co - The parameters are:
Input alignment file - 251.paln
Output conservation - STDOUT
Weighting scheme - independent-count based
Conservation calculation method - entropy-based
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation - 0.50
10 20 30 40 50 60
MQDDLLMDKS KTQPQSQQQQ RQQQQQQQQL QPEPGAAEAP STPLSSEIPK PEDSSAVPAL
70 80 90 100 110 120
SPASAPPAPN GPDKMQMESP LLPGLSFHQP PQQPPPPQEP TAPGASLSPS FGSTWSTGTT
130 140 150 160 170 180
NAVEDSFFQG ITPVNGTMLF QNFPHHVNPV FGGTFSPQIG LAQTQHHQQP PPPAPQPPQP
190 200 210 220 230 240
AQPPQAQPSQ QRRSPASPSQ APYAQRSAAA YGHQPIMTSK PSSSSAVAAA AAAAAASSAS
250 260 270 280 290 300
SSWNTHQSVN AAWSAPSNPW GGLQAGRDPR RAVGVGVGVG VGVPSPLNPI SPLKKPFSSN
310 320 330 340 350 360
VIAPPKFPRA APLTSKSWME DNAFRTDNGN NLLPFQDRSR PYDTFNLHSL ENSLMDMIRT
370 380 390 400 410 420
DHEPLKGKHY PNSGPPMSFA DIMWRNHFAG RMGINFHHPG TDNIMALNTR SYGRRRGRSS
430 440 450 460 470 480
LFPFEDAFLD DSHGDQALSS GLSSPTRCQN GERVERYSRK VFVGGLPPDI DEDEITASFR
490 500 510 520 530 540
RFGPLVVDWP HKAESKSYFP PKGYAFLLFQ EESSVQALID ACLEEDGKLY LCVSSPTIKD
550 560 570 580 590 600
KPVQIRPWNL SDSDFVMDGS QPLDPRKTIF VGGVPRPLRA VELAMIMDRL YGGVCYAGID
610 620 630 640 650 660
TDPELKYPKG AGRVAFSNQQ SYIAAISARF VQLQHNDIDK RVEVKPYVLD DQMCDECQGT
670 680 690 700 710
RCGGKFAPFF CANVTCLQYY CEYCWASIHS RAGREFHKPL VKEGGDRPRH VPFRWS
CPEB3 is a sequence-specific RNA-binding protein predominantly cytoplamic protein that shuttles between cytoplasm and nucleus to control gene expression. CPEB3 plays a cytoplasmic role in translation and a nuclear role in transcription. Nuclear import of CPEB3 is facilitated by IPO5 (also known as Importin beta 3 and Karyopherin beta 3).
[1]. "NMDAR signaling facilitates the IPO5-mediated
nuclear import of CPEB3"
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Accurate identification of NESs is difficult because many sequences in the genome match the NES consensus.
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