Summary for Hsp70-Ssb1p (NES ID: 29)
Full Name
Heat shock protein SSB1
UniProt
Alternative Names
Cold-inducible protein YG101
Organism
Saccharomyces cerevisiae (Baker's yeast)
Experimental Evidence for CRM1-mediated Export
Mutations That Affect Nuclear Export
Unknown
Mutations That Affect CRM1 Binding
Unknown
Functional Export Signals
Secondary Structure of Export Signal
Unknown
Other Residues Important for Export
Unknown
Sequence
Show FASTA Format
>gi|123635|sp|P11484.3|HSP75_YEAST RecName: Full=Heat shock protein SSB1; AltName: Full=Cold-inducible protein YG101
MAEGVFQGAIGIDLGTTYSCVATYESSVEIIANEQGNRVTPSFVAFTPEERLIGDAAKNQAALNPRNTVF
DAKRLIGRRFDDESVQKDMKTWPFKVIDVDGNPVIEVQYLEETKTFSPQEISAMVLTKMKEIAEAKIGKK
VEKAVITVPAYFNDAQRQATKDAGAISGLNVLRIINEPTAAAIAYGLGAGKSEKERHVLIFDLGGGTFDV
SLLHIAGGVYTVKSTSGNTHLGGQDFDTNLLEHFKAEFKKKTGLDISDDARALRRLRTAAERAKRTLSSV
TQTTVEVDSLFDGEDFESSLTRARFEDLNAALFKSTLEPVEQVLKDAKISKSQIDEVVLVGGSTRIPKVQ
KLLSDFFDGKQLEKSINPDEAVAYGAAVQGAILTGQSTSDETKDLLLLDVAPLSLGVGMQGDMFGIVVPR
NTTVPTIKRRTFTTCADNQTTVQFPVYQGERVNCKENTLLGEFDLKNIPMMPAGEPVLEAIFEVDANGIL
KVTAVEKSTGKSSNITISNAVGRLSSEEIEKMVNQAEEFKAADEAFAKKHEARQRLESYVASIEQTVTDP
VLSSKLKRGSKSKIEAALSDALAALQIEDPSADELRKAEVGLKRVVTKAMSSR
Show Domain Info by CDD
Show Secondary Structure by PSIPRED
# PSIPRED HFORMAT (PSIPRED V3.2)
Conf: 976556780244217603367884155289847889966765245146400001111001
Pred: CCCCCCCCCEEEECCCCEEEEEEEECCEEEEECCCCCCCCCCEEEECCCCHHCCHHHHCC
AA: MAEGVFQGAIGIDLGTTYSCVATYESSVEIIANEQGNRVTPSFVAFTPEERLIGDAAKNQ
10 20 30 40 50 60
Conf: 245988862010000046789822111247788187438993049999805554338334
Pred: CCCCCCCCCCCCHHHCCCCCCCHHHHCCCCCCCEEEECCCCCEEEEEEEECCCCCCCHHH
AA: AALNPRNTVFDAKRLIGRRFDDESVQKDMKTWPFKVIDVDGNPVIEVQYLEETKTFSPQE
70 80 90 100 110 120
Conf: 568999856999998614543430797114203011211001362135413343252248
Pred: HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHCCCCCCCCCEEEEECCCHHH
AA: ISAMVLTKMKEIAEAKIGKKVEKAVITVPAYFNDAQRQATKDAGAISGLNVLRIINEPTA
130 140 150 160 170 180
Conf: 898851599988760038999818951365757672716899704677556877652137
Pred: HHHHHHCCCCCCCCCEEEEEEECCCCEEEEEEEEEECCEEEEEECCCCCCCCCCCCCHHH
AA: AAIAYGLGAGKSEKERHVLIFDLGGGTFDVSLLHIAGGVYTVKSTSGNTHLGGQDFDTNL
190 200 210 220 230 240
Conf: 999999984321799996878998999999885310153452016731444565421013
Pred: HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHH
AA: LEHFKAEFKKKTGLDISDDARALRRLRTAAERAKRTLSSVTQTTVEVDSLFDGEDFESSL
250 260 270 280 290 300
Conf: 478689967998410001699974230269456545999638644235789875313872
Pred: HHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCC
AA: TRARFEDLNAALFKSTLEPVEQVLKDAKISKSQIDEVVLVGGSTRIPKVQKLLSDFFDGK
310 320 330 340 350 360
Conf: 346679921355565778887751899860122313100355653211258412320048
Pred: CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCC
AA: QLEKSINPDEAVAYGAAVQGAILTGQSTSDETKDLLLLDVAPLSLGVGMQGDMFGIVVPR
370 380 390 400 410 420
Conf: 975475201244543069841279765244222246862111010699999999764899
Pred: CCCCCCCCEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCEECCCCCCCCCCCCEEEE
AA: NTTVPTIKRRTFTTCADNQTTVQFPVYQGERVNCKENTLLGEFDLKNIPMMPAGEPVLEA
430 440 450 460 470 480
Conf: 998616711467642035796232587437877898899999987996414339999855
Pred: EEEECCCCEEEEEEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AA: IFEVDANGILKVTAVEKSTGKSSNITISNAVGRLSSEEIEKMVNQAEEFKAADEAFAKKH
490 500 510 520 530 540
Conf: 642114566641012356600001237442668999999999864207989578899897
Pred: HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
AA: EARQRLESYVASIEQTVTDPVLSSKLKRGSKSKIEAALSDALAALQIEDPSADELRKAEV
550 560 570 580 590 600
Conf: 4677520012389
Pred: HHHHHHCCCCCCC
AA: GLKRVVTKAMSSR
610
Show Conservation Score by AL2CO
1 M -1.000 *
2 A -1.000 *
3 E -1.000 *
4 G -1.000 *
5 V -1.000 *
6 F -1.000 *
7 Q -1.350
8 G -1.569
9 A -0.481
10 I 0.759
11 G 1.454
12 I 1.955
13 D 1.955
14 L 1.955
15 G 1.955
16 T 1.458
17 T 1.050
18 Y 1.233
19 S 1.955
20 C 1.006
21 V 0.723
22 A 1.092
23 T -0.747
24 Y -1.041
25 E -1.370
26 S -0.521
27 S -0.723
28 V -0.151
29 E 0.563
30 I 1.328
31 I 0.145
32 A -0.476
33 N 1.462
34 E 0.182
35 Q -0.064
36 G 1.955
37 N -0.151
38 R 0.384
39 V 0.351
40 T 0.990
41 P 0.720
42 S 1.060
43 F 0.115
44 V 0.991
45 A 0.185
46 F 0.979
47 T -0.467
48 P -0.788
49 E -0.926
50 E 0.637
51 R 1.471
52 L 0.595
53 I 0.273
54 G 1.467
55 D 0.822
56 A 0.099
57 A 1.955
58 K -0.116
59 N -0.711
60 Q 0.056
61 A -0.992
62 A -0.310
63 L -1.268
64 N 0.994
65 P -0.047
66 R -1.799
67 N -0.164
68 T 0.903
69 V 0.215
70 F 1.164
71 D 0.322
72 A -0.041
73 K 1.468
74 R 1.955
75 L 0.443
76 I 0.956
77 G 1.955
78 R 0.087
79 R -1.273
80 F -0.484
81 D -1.137
82 D 0.021
83 E -1.495
84 S -1.548
85 V 0.069
86 Q -0.751
87 K -1.208
88 D 0.405
89 M -0.753
90 K -0.735
91 T -1.203
92 W -0.001
93 P 1.127
94 F 0.469
95 K -1.326
96 V -0.524
97 I -1.609
98 D -1.359
99 V -1.483
100 D -1.337
101 G -1.100
102 N -0.760
103 P 0.339
104 V -1.610
105 I -0.465
106 E -1.583
107 V 0.121
108 Q -1.361
109 Y -0.736
110 L -1.242
111 E -0.868
112 E -1.089
113 T -1.658
114 K 0.423
115 T -1.606
116 F 0.421
117 S -1.221
118 P 0.775
119 Q 0.941
120 E 0.914
121 I 0.262
122 S 1.468
123 A 0.681
124 M 0.396
125 V 0.280
126 L 1.068
127 T -1.186
128 K 1.312
129 M 1.467
130 K 0.801
131 E -0.425
132 I -0.057
133 A 0.886
134 E 0.006
135 A -1.091
136 K 0.678
137 I 0.174
138 G 0.296
139 K -1.655
140 K -1.434
141 V 0.247
142 E -1.370
143 K -0.874
144 A 0.295
145 V 1.067
146 I 1.046
147 T 1.468
148 V 1.357
149 P 1.468
150 A 1.466
151 Y 1.955
152 F 0.681
153 N 0.525
154 D 0.675
155 A -0.234
156 Q 1.067
157 R 1.406
158 Q -0.575
159 A 0.957
160 T 1.955
161 K 0.733
162 D 1.468
163 A 0.957
164 G 0.889
165 A -1.211
166 I 0.688
167 S 0.381
168 G 0.548
169 L 0.361
170 N -0.734
171 V 0.241
172 L -1.062
173 R 0.738
174 I 0.559
175 I 0.218
176 N 1.074
177 E 1.955
178 P 1.955
179 T 0.647
180 A 0.440
181 A 1.463
182 A 0.731
183 I 0.506
184 A 1.955
185 Y 1.468
186 G 1.466
187 L 0.467
188 G 0.199
189 A -0.026
190 G -1.000 *
191 K -1.474
192 S -1.540
193 E -1.528
194 K -1.407
195 E 0.517
196 R -1.216
197 H -0.924
198 V 0.761
199 L 0.221
200 I 0.760
201 F 0.510
202 D 1.955
203 L 0.969
204 G 1.468
205 G 1.467
206 G 1.066
207 T 1.065
208 F 1.467
209 D 1.466
210 V 1.467
211 S 0.833
212 L 0.222
213 L 1.069
214 H -0.899
215 I 0.207
216 A -0.731
217 G -0.839
218 G 1.057
219 V -0.204
220 Y 1.335
221 T 0.115
222 V 1.463
223 K -0.587
224 S 0.752
225 T 1.057
226 S -0.597
227 G 1.366
228 N 0.788
229 T 0.722
230 H 1.468
231 L 1.468
232 G 1.463
233 G 1.067
234 Q 0.906
235 D 1.463
236 F 0.637
237 D 1.463
238 T -1.181
239 N -0.588
240 L -0.313
241 L -0.356
242 E -1.156
243 H -0.261
244 F -0.461
245 K -1.182
246 A -1.201
247 E -1.179
248 F -0.306
249 K -0.925
250 K -0.395
251 K -0.195
252 T -1.115
253 G -0.728
254 L -1.002
255 D -0.318
256 I -0.431
257 S -1.455
258 D -1.367
259 D 0.146
260 A -1.436
261 R 0.060
262 A 0.155
263 L -0.377
264 R -0.329
265 R 1.073
266 L 1.046
267 R 0.166
268 T 0.334
269 A -0.371
270 A -0.118
271 E 1.955
272 R 0.460
273 A -0.229
274 K 1.468
275 R 0.734
276 T -0.635
277 L 1.955
278 S 1.955
279 S -0.732
280 V -0.676
281 T -1.203
282 Q -0.817
283 T -0.271
284 T -1.395
285 V -0.053
286 E 0.368
287 V 0.126
288 D 1.065
289 S -0.263
290 L 0.129
291 F -1.237
292 D -0.492
293 G 0.447
294 E -1.413
295 D 1.068
296 F 0.603
297 E -1.261
298 S -1.149
299 S -1.302
300 L 0.034
301 T 0.258
302 R 0.994
303 A 0.989
304 R 1.062
305 F 1.955
306 E 1.468
307 D -0.140
308 L 0.179
309 N 0.485
310 A -1.248
311 A -0.767
312 L -0.478
313 F 1.955
314 K -0.541
315 S -1.135
316 T 0.158
317 L -0.335
318 E -1.465
319 P -0.096
320 V 0.675
321 E -0.892
322 Q -0.910
323 V -0.030
324 L 0.373
325 K -1.290
326 D 0.435
327 A 0.165
328 K -0.696
329 I -0.838
330 S -1.302
331 K -0.174
332 S -1.267
333 Q -1.473
334 I 0.230
335 D -0.700
336 E 0.429
337 V 0.382
338 V 0.952
339 L 0.579
340 V 1.355
341 G 1.955
342 G 1.467
343 S 1.955
344 T 0.391
345 R 1.955
346 I 0.912
347 P 1.371
348 K 1.162
349 V 1.048
350 Q 0.008
351 K -1.088
352 L 0.457
353 L 0.553
354 S -1.047
355 D -0.557
356 F -0.123
357 F 0.275
358 D -0.913
359 G 0.282
360 K 0.840
361 Q -1.124
362 L -0.056
363 E -0.740
364 K -0.318
365 S -0.291
366 I 0.556
367 N 0.963
368 P 1.068
369 D 1.955
370 E 1.955
371 A 1.469
372 V 1.466
373 A 1.955
374 Y 0.222
375 G 1.955
376 A 1.955
377 A 0.738
378 V 1.172
379 Q 0.387
380 G 0.501
381 A -0.262
382 I 0.775
383 L 0.323
384 T -1.321
385 G 0.345
386 Q -1.189
387 S -1.229
388 T -1.264
389 S -1.233
390 D -1.156
391 E -1.468
392 T -0.797
393 K -1.041
394 D -0.481
395 L 0.030
396 L 0.370
397 L 0.335
398 L 0.058
399 D 1.468
400 V 1.070
401 A -0.519
402 P 0.551
403 L 1.426
404 S 0.503
405 L -0.076
406 G 1.070
407 V 0.417
408 G 0.682
409 M 0.396
410 Q -0.623
411 G 1.470
412 D 0.237
413 M -0.115
414 F 0.554
415 G 0.160
416 I -1.142
417 V 0.175
418 V 0.810
419 P -1.159
420 R 1.008
421 N 1.235
422 T -0.222
423 T -1.159
424 V 0.482
425 P 1.955
426 T -0.792
427 I -0.603
428 K -0.697
429 R -0.996
430 R -0.166
431 T -0.837
432 F 1.070
433 T 0.270
434 T 1.470
435 C -0.918
436 A -0.913
437 D 0.861
438 N -0.605
439 Q 1.470
440 T -1.018
441 T -0.671
442 V 0.735
443 Q -1.418
444 F 0.244
445 P -0.953
446 V 1.272
447 Y 0.688
448 Q 0.620
449 G 1.470
450 E 1.955
451 R 0.630
452 V -0.866
453 N -0.656
454 C -0.077
455 K -0.587
456 E -0.428
457 N 1.122
458 T -0.620
459 L -1.524
460 L 1.320
461 G 1.955
462 E -0.969
463 F 1.388
464 D -0.707
465 L 1.044
466 K -1.277
467 N -0.269
468 I 0.266
469 P 0.191
470 M -0.140
471 M 0.036
472 P 0.074
473 A 0.155
474 G 0.453
475 E -0.635
476 P 1.470
477 V 0.404
478 L 0.462
479 E -0.907
480 A 1.002
481 I -0.797
482 F 0.853
483 E -0.083
484 V 0.185
485 D 0.594
486 A -0.387
487 N 0.509
488 G 0.572
489 I 0.382
490 L 0.073
491 K -0.980
492 V 0.932
493 T -1.068
494 A 1.472
495 V -1.391
496 E 1.084
497 K -1.081
498 S -0.507
499 T 0.094
500 G -0.235
501 K -0.920
502 S -1.225
503 S -0.971
504 N -1.052
505 I 0.863
506 T -0.668
507 I 1.070
508 S -0.444
509 N -0.149
510 A -0.738
511 V -0.814
512 G -0.083
513 R 0.157
514 L 0.302
515 S -0.475
516 S -1.077
517 E -0.840
518 E 0.150
519 I 0.277
520 E -0.056
521 K -0.829
522 M 1.226
523 V -0.079
524 N -1.166
525 Q -0.175
526 A 0.449
527 E -0.601
528 E -1.169
529 F 0.176
530 K -0.674
531 A -1.397
532 A -0.592
533 D 1.955
534 E -1.082
535 A -1.509
536 F -1.469
537 A -0.856
538 K -1.423
539 K -0.965
540 H -0.331
541 E -1.130
542 A -0.511
543 R -0.335
544 Q -0.103
545 R -1.134
546 L 0.151
547 E 0.529
548 S -0.827
549 Y -0.966
550 V -0.654
551 A -0.743
552 S -0.984
553 I -0.693
554 E -0.183
555 Q -0.947
556 T -0.784
557 V -0.716
558 T -1.294
559 D -0.632
560 P -1.193
561 V -1.368
562 L -1.470
563 S -1.217
564 S -1.202
565 K -0.861
566 L -0.613
567 K -1.255
568 R -1.277
569 G -1.175
570 S -0.398
571 K -1.013
572 S -1.150
573 K -1.444
574 I -0.454
575 E -1.557
576 A -1.194
577 A -1.510
578 L -0.746
579 S -1.145
580 D -1.038
581 A -1.204
582 L -1.056
583 A -1.122
584 A 0.065
585 L 0.064
586 Q -0.573
587 I -1.470
588 E -0.828
589 D -1.163
590 P -0.868
591 S -1.080
592 A -1.398
593 D -0.867
594 E -0.197
595 L -0.751
596 R -1.099
597 K -1.373
598 A -0.842
599 E -1.207
600 V -1.276
601 G -1.054
602 L -0.752
603 K -0.758
604 R -1.367
605 V -1.217
606 V -0.980
607 T -1.444
608 K -0.355
609 A -0.935
610 M -0.873
611 S -0.313
612 S -1.000 *
613 R -1.000 *
* gap fraction no less than 0.50; conservation set to M-S
M: mean; S: standard deviation
al2co - The parameters are:
Input alignment file - 29.paln
Output conservation - STDOUT
Weighting scheme - independent-count based
Conservation calculation method - entropy-based
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation - 0.50
10 20 30 40 50 60
MAEGVFQGAI GIDLGTTYSC VATYESSVEI IANEQGNRVT PSFVAFTPEE RLIGDAAKNQ
70 80 90 100 110 120
AALNPRNTVF DAKRLIGRRF DDESVQKDMK TWPFKVIDVD GNPVIEVQYL EETKTFSPQE
130 140 150 160 170 180
ISAMVLTKMK EIAEAKIGKK VEKAVITVPA YFNDAQRQAT KDAGAISGLN VLRIINEPTA
190 200 210 220 230 240
AAIAYGLGAG KSEKERHVLI FDLGGGTFDV SLLHIAGGVY TVKSTSGNTH LGGQDFDTNL
250 260 270 280 290 300
LEHFKAEFKK KTGLDISDDA RALRRLRTAA ERAKRTLSSV TQTTVEVDSL FDGEDFESSL
310 320 330 340 350 360
TRARFEDLNA ALFKSTLEPV EQVLKDAKIS KSQIDEVVLV GGSTRIPKVQ KLLSDFFDGK
370 380 390 400 410 420
QLEKSINPDE AVAYGAAVQG AILTGQSTSD ETKDLLLLDV APLSLGVGMQ GDMFGIVVPR
430 440 450 460 470 480
NTTVPTIKRR TFTTCADNQT TVQFPVYQGE RVNCKENTLL GEFDLKNIPM MPAGEPVLEA
490 500 510 520 530 540
IFEVDANGIL KVTAVEKSTG KSSNITISNA VGRLSSEEIE KMVNQAEEFK AADEAFAKKH
550 560 570 580 590 600
EARQRLESYV ASIEQTVTDP VLSSKLKRGS KSKIEAALSD ALAALQIEDP SADELRKAEV
610
GLKRVVTKAM SSR
3D Structures in PDB
Not Available
Comments
Hsp70 are conserved molecular chaperones that participate in a variety of cellular functions, including protein folding and transport and the repair of stress-induced damage. S. cerevisiae contains two families of cytosolic Hsp70 genes, Ssa, and Ssb. Shulga et al. showed that Ssa1p localize in both the nucleus and cytoplasm. On the other hand, Ssb1p is exclusively cytoplasmic. Then they showed the C-terminus of Ssb1p (aa 546-613) can function autonomously to prevent nuclear localization using GFP-pA reporter protein. They further narrow the NES to aa 574-587 since the sequence, when inserted between LexA and pseudorabies domain of a transcriptional activator, can inhibit the growth of HIS3 on medium lacking histidine. This is supposedly because the activator was exported before it could activate the HIS transcription.
References
[1]. "A nuclear export signal prevents Saccharomyces cerevisiae Hsp70 Ssb1p from stimulating nuclear localization signal-directed nuclear transport"
Shulga, N., James, P., Craig, E.A., Goldfarb, D.S. (1999)
J Biol Chem,
274:16501-16507
PubMed
User Input
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