SRY-box transcription factor SOX14A
UniProt
Show FASTA Format
>tr|A0A1W5HKL7|A0A1W5HKL7_ERISI SOX14A OS=Eriocheir sinensis OX=95602 GN=Sox14a PE=2 SV=1
MLPQSVTDRSTSPTTTQGVIFGSQLVQANSRTPYSDATQTTKHNPNHVKRPMNAFMVWSQ
MERREIVKFAPDMHNAEISKQLGKRWKNLTEDQRQPYIQEAERLRLLHMQEYPDYKYRPR
KKTKSGNSKSVEKGRVSKAKDKTSTSINAIKGVKLTADPSRAQVTTGLSSINHNKLKLKL
KIDKKFKDSIRNTNTMYVPIAQCTSPAEVPATPNEMPASPESASLYDNHVTTSPSRSSSR
SASTSPAPGKEPFLYGLYTIESAPGLTSLRPEALVSSTTVTTTDDDDDDDDDDDDEKDDL
KEDILMYSRKRHAVRDEVFAPRPVPPTSLSSSRAADPPPIKMEPLDIKQEPPTESALADL
DSLTDLLQIPSDFKVEVDEINSDLDFDAVSTSSGSHFEFSDVSDMLSDIGVSNDCWADIG
IIN
Show Domain Info by CDD
Show Secondary Structure by PSIPRED
# PSIPRED HFORMAT (PSIPRED V3.2)
Conf: 976655788999999877434551224789998999886688999987898731242336
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
AA: MLPQSVTDRSTSPTTTQGVIFGSQLVQANSRTPYSDATQTTKHNPNHVKRPMNAFMVWSQ
10 20 30 40 50 60
Conf: 687786541999614898887644210457223871499999999985300999998888
Pred: HHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
AA: MERREIVKFAPDMHNAEISKQLGKRWKNLTEDQRQPYIQEAERLRLLHMQEYPDYKYRPR
70 80 90 100 110 120
Conf: 888899998754575666778876665445687667999977645687766644220013
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
AA: KKTKSGNSKSVEKGRVSKAKDKTSTSINAIKGVKLTADPSRAQVTTGLSSINHNKLKLKL
130 140 150 160 170 180
Conf: 001123444467887667899999985368999999999888887789999999989988
Pred: HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: KIDKKFKDSIRNTNTMYVPIAQCTSPAEVPATPNEMPASPESASLYDNHVTTSPSRSSSR
190 200 210 220 230 240
Conf: 878999999998655665555899988889866667875457899999999997776766
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: SASTSPAPGKEPFLYGLYTIESAPGLTSLRPEALVSSTTVTTTDDDDDDDDDDDDEKDDL
250 260 270 280 290 300
Conf: 555223356777776788888999999888899899999989989889999997744777
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AA: KEDILMYSRKRHAVRDEVFAPRPVPPTSLSSSRAADPPPIKMEPLDIKQEPPTESALADL
310 320 330 340 350 360
Conf: 876533488999976765446677887778999998779984677421699987555335
Pred: CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCC
AA: DSLTDLLQIPSDFKVEVDEINSDLDFDAVSTSSGSHFEFSDVSDMLSDIGVSNDCWADIG
370 380 390 400 410 420
Conf: 459
Pred: CCC
AA: IIN
Show Conservation Score by AL2CO
1 M -1.000 *
2 L -1.000 *
3 P -1.000 *
4 Q -1.000 *
5 S -1.000 *
6 V -1.000 *
7 T -1.000 *
8 D -1.000 *
9 R -1.000 *
10 S -1.000 *
11 T -1.000 *
12 S -1.000 *
13 P -1.000 *
14 T -1.000 *
15 T -1.000 *
16 T -1.000 *
17 Q -1.000 *
18 G -1.000 *
19 V -1.000 *
20 I -1.000 *
21 F -1.000 *
22 G -0.266
23 S -0.445
24 Q -0.440
25 L -0.507
26 V -0.371
27 Q -0.470
28 A -0.470
29 N -0.500
30 S -0.274
31 R -0.489
32 T -0.507
33 P -0.028
34 Y -0.444
35 S -0.380
36 D -0.458
37 A -0.425
38 T -0.208
39 Q -0.422
40 T -0.450
41 T -0.305
42 K -0.388
43 H -0.469
44 N -0.220
45 P -0.342
46 N 0.098
47 H 1.229
48 V 1.971
49 K 1.978
50 R 2.732
51 P 2.732
52 M 2.076
53 N 2.732
54 A 1.330
55 F 2.732
56 M 2.732
57 V 2.308
58 W 2.732
59 S 1.962
60 Q 0.995
61 M -0.034
62 E 0.665
63 R 2.732
64 R 1.248
65 E 0.691
66 I 1.009
67 V 0.541
68 K 0.210
69 F -0.034
70 A -0.015
71 P 2.202
72 D 0.561
73 M 0.850
74 H 1.730
75 N 2.135
76 A 1.953
77 E 1.004
78 I 1.559
79 S 2.732
80 K 2.081
81 Q -0.114
82 L 2.732
83 G 2.732
84 K -0.101
85 R 0.024
86 W 2.732
87 K 1.104
88 N -0.353
89 L 2.125
90 T 0.029
91 E -0.178
92 D -0.416
93 Q 0.872
94 R 1.945
95 Q 0.036
96 P 2.202
97 Y 1.676
98 I 0.385
99 Q 0.238
100 E 1.185
101 A 1.856
102 E 0.231
103 R 0.761
104 L 2.732
105 R 0.998
106 L -0.135
107 L -0.090
108 H 2.732
109 M 0.327
110 Q -0.055
111 E 0.286
112 Y 1.235
113 P 2.732
114 D 0.812
115 Y 1.872
116 K 1.501
117 Y 1.524
118 R 0.498
119 P 1.945
120 R 1.131
121 K 1.033
122 K 0.713
123 T -0.308
124 K -0.191
125 S -0.340
126 G -0.483
127 N -0.476
128 S -0.520
129 K -0.366
130 S -0.366
131 V -0.571
132 E -0.531
133 K -0.554
134 G -0.471
135 R -0.604
136 V -0.594
137 S -0.570
138 K -0.575
139 A -0.568
140 K -0.542
141 D -0.547
142 K -0.587
143 T -0.642
144 S -0.565
145 T -0.596
146 S -0.533
147 I -0.605
148 N -0.498
149 A -0.518
150 I -0.655
151 K -0.623
152 G -0.600
153 V -0.665
154 K -0.653
155 L -0.615
156 T -0.618
157 A -0.639
158 D -0.560
159 P -0.562
160 S -0.605
161 R -0.641
162 A -0.659
163 Q -0.589
164 V -0.676
165 T -0.626
166 T -0.620
167 G -0.507
168 L -0.657
169 S -0.614
170 S -0.531
171 I -0.637
172 N -0.572
173 H -0.633
174 N -0.633
175 K -0.637
176 L -0.624
177 K -0.588
178 L -0.662
179 K -0.609
180 L -0.618
181 K -0.560
182 I -0.610
183 D -0.587
184 K -0.484
185 K -0.643
186 F -0.637
187 K -0.639
188 D -0.598
189 S -0.554
190 I -0.614
191 R -0.571
192 N -0.587
193 T -0.530
194 N -0.594
195 T -0.600
196 M -0.602
197 Y -0.612
198 V -0.623
199 P -0.525
200 I -0.631
201 A -0.603
202 Q -0.526
203 C -0.618
204 T -0.593
205 S -0.623
206 P -0.623
207 A -0.619
208 E -0.598
209 V -0.519
210 P -0.407
211 A -0.602
212 T -0.567
213 P -0.540
214 N -0.580
215 E -0.579
216 M -0.596
217 P -0.515
218 A -0.624
219 S -0.527
220 P -0.505
221 E -0.537
222 S -0.525
223 A -0.565
224 S -0.584
225 L -0.559
226 Y -0.545
227 D -0.512
228 N -0.516
229 H -0.593
230 V -0.594
231 T -0.609
232 T -0.597
233 S -0.588
234 P -0.609
235 S -0.554
236 R -0.581
237 S -0.560
238 S -0.571
239 S -0.634
240 R -0.653
241 S -0.580
242 A -0.634
243 S -0.599
244 T -0.657
245 S -0.564
246 P -0.562
247 A -0.565
248 P -0.556
249 G -0.573
250 K -0.562
251 E -0.619
252 P -0.585
253 F -0.607
254 L -0.610
255 Y -0.593
256 G -0.583
257 L -0.556
258 Y -0.564
259 T -0.453
260 I -0.625
261 E -0.485
262 S -0.569
263 A -0.586
264 P -0.550
265 G -0.586
266 L -0.605
267 T -0.537
268 S -0.513
269 L -0.426
270 R -0.489
271 P -0.464
272 E -0.509
273 A -0.521
274 L -0.621
275 V -0.452
276 S -0.537
277 S -0.333
278 T -0.437
279 T -1.000 *
280 V -1.000 *
281 T -1.000 *
282 T -1.000 *
283 T -1.000 *
284 D -1.000 *
285 D -1.000 *
286 D -1.000 *
287 D -1.000 *
288 D -1.000 *
289 D -1.000 *
290 D -1.000 *
291 D -1.000 *
292 D -1.000 *
293 D -1.000 *
294 D -1.000 *
295 D -1.000 *
296 E -1.000 *
297 K -1.000 *
298 D -1.000 *
299 D -1.000 *
300 L -1.000 *
301 K -1.000 *
302 E -1.000 *
303 D -1.000 *
304 I -1.000 *
305 L -1.000 *
306 M -1.000 *
307 Y -1.000 *
308 S -1.000 *
309 R -1.000 *
310 K -1.000 *
311 R -1.000 *
312 H -1.000 *
313 A -1.000 *
314 V -1.000 *
315 R -1.000 *
316 D -1.000 *
317 E -1.000 *
318 V -1.000 *
319 F -1.000 *
320 A -1.000 *
321 P -1.000 *
322 R -1.000 *
323 P -1.000 *
324 V -1.000 *
325 P -1.000 *
326 P -1.000 *
327 T -1.000 *
328 S -1.000 *
329 L -1.000 *
330 S -1.000 *
331 S -1.000 *
332 S -1.000 *
333 R -1.000 *
334 A -1.000 *
335 A -1.000 *
336 D -1.000 *
337 P -1.000 *
338 P -1.000 *
339 P -1.000 *
340 I -1.000 *
341 K -1.000 *
342 M -1.000 *
343 E -1.000 *
344 P -1.000 *
345 L -1.000 *
346 D -1.000 *
347 I -1.000 *
348 K -1.000 *
349 Q -1.000 *
350 E -1.000 *
351 P -1.000 *
352 P -1.000 *
353 T -1.000 *
354 E -1.000 *
355 S -1.000 *
356 A -1.000 *
357 L -1.000 *
358 A -1.000 *
359 D -1.000 *
360 L -1.000 *
361 D -1.000 *
362 S -1.000 *
363 L -1.000 *
364 T -1.000 *
365 D -1.000 *
366 L -1.000 *
367 L -1.000 *
368 Q -1.000 *
369 I -1.000 *
370 P -1.000 *
371 S -1.000 *
372 D -1.000 *
373 F -1.000 *
374 K -1.000 *
375 V -1.000 *
376 E -1.000 *
377 V -1.000 *
378 D -1.000 *
379 E -1.000 *
380 I -1.000 *
381 N -1.000 *
382 S -1.000 *
383 D -1.000 *
384 L -1.000 *
385 D -1.000 *
386 F -1.000 *
387 D -1.000 *
388 A -1.000 *
389 V -1.000 *
390 S -1.000 *
391 T -1.000 *
392 S -1.000 *
393 S -1.000 *
394 G -1.000 *
395 S -1.000 *
396 H -1.000 *
397 F -1.000 *
398 E -1.000 *
399 F -1.000 *
400 S -1.000 *
401 D -1.000 *
402 V -1.000 *
403 S -1.000 *
404 D -1.000 *
405 M -1.000 *
406 L -1.000 *
407 S -1.000 *
408 D -1.000 *
409 I -1.000 *
410 G -1.000 *
411 V -1.000 *
412 S -1.000 *
413 N -1.000 *
414 D -1.000 *
415 C -1.000 *
416 W -1.000 *
417 A -1.000 *
418 D -1.000 *
419 I -1.000 *
420 G -1.000 *
421 I -1.000 *
422 I -1.000 *
423 N -1.000 *
* gap fraction no less than 0.50; conservation set to M-S
M: mean; S: standard deviation
al2co - The parameters are:
Input alignment file - 306.paln
Output conservation - STDOUT
Weighting scheme - independent-count based
Conservation calculation method - entropy-based
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation - 0.50
10 20 30 40 50 60
MLPQSVTDRS TSPTTTQGVI FGSQLVQANS RTPYSDATQT TKHNPNHVKR PMNAFMVWSQ
70 80 90 100 110 120
MERREIVKFA PDMHNAEISK QLGKRWKNLT EDQRQPYIQE AERLRLLHMQ EYPDYKYRPR
130 140 150 160 170 180
KKTKSGNSKS VEKGRVSKAK DKTSTSINAI KGVKLTADPS RAQVTTGLSS INHNKLKLKL
190 200 210 220 230 240
KIDKKFKDSI RNTNTMYVPI AQCTSPAEVP ATPNEMPASP ESASLYDNHV TTSPSRSSSR
250 260 270 280 290 300
SASTSPAPGK EPFLYGLYTI ESAPGLTSLR PEALVSSTTV TTTDDDDDDD DDDDDEKDDL
310 320 330 340 350 360
KEDILMYSRK RHAVRDEVFA PRPVPPTSLS SSRAADPPPI KMEPLDIKQE PPTESALADL
370 380 390 400 410 420
DSLTDLLQIP SDFKVEVDEI NSDLDFDAVS TSSGSHFEFS DVSDMLSDIG VSNDCWADIG
IIN
SOX proteins are a family of transcription factors related to the testis-determining factor SRY. SOX proteins are characterized by a highly conserved DNA binding high mobility group (HMG) DNA binding domain, which includes two NLSs. By homology to SOX9 (#129) and SOX10 (#60), She and Yang identified putative NESs in SOX14a/SOX14b HMG box. LMB inhibition and leucine mutation only caused moderate nuclear accumulation in putative NES peptide fused to GFP. Authors also note that the putative NES does not match a traditional NES consensus and lacks phi3, however, upon inspection of the sequence, there is a Trp positioned in place to possibly act as phi3 even though it is a more unfavorable residue.
[1]. "Nucleocytoplasmic Shuttling of SOX14A and SOX14B Transcription Factors"
She ZY, Yang WX. (2017)
Oncotarget,
8(29):46955-46968
PubMed
Accurate identification of NESs is difficult because many sequences in the genome match the NES consensus.
Therefore, some published NESs may be mistakenly identified. Please help us improve the accuracy of NESdb
by providing either a positive or negative flag for the NES in this entry. Supporting comments are required to process the flag.